Name: Streptomonospora salina DSM 44593
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 11244

Type strain:

Species: Streptomonospora salina

Culture col. no.: DSM 44593, CCRC 16284, CCTCC 99003, YIM 90002, JCM 11823, BCRC 16284, CIP 107368, KCTC 19919, NBRC 105862

Strain history: CIP <- 2002, C.L. Jiang, Yunnan Univ., Kunming, China <- CCTCC <- CCRC <- DSMZ <- YIM

NCBI tax ID(s): 104205 (species)

SI-ID 100971

CCRC 16284, DSM 44593, KCTC 19919, JCM 11823, BCRC 16284, CIP 107368

Special Collections

Section

Streptomonospora salina DSM 44593 is a bacterium that was isolated from soil sample from a salt lake.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Nocardiopsidaceae*
	Genus	*Streptomonospora*
	Species	**Streptomonospora salina**
	Full Scientific Name (LPSN)	Streptomonospora salina corrig. Cui et al. 2001

Synonym

Streptimonospora salina

Information on morphological and physiological properties Morphology

[Ref.: #122381]	Gram stain	positive

[Ref.: #122381]	Cell shape	filament-shaped

[Ref.: #122381]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %92.5

Multimedia content

[Ref.: #11908]

Caption:

Medium 1159 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

[Ref.: #33778]

Culture medium

MEDIUM 432 - for Streptomonospora salina

[Ref.: #33778]

Culture medium growth

[Ref.: #33778]

Culture medium composition

expand / minimize

[Ref.: #11908]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

[Ref.: #11908]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11908]

Culture medium composition

expand / minimize

[Ref.: #122381]

Culture medium

CIP Medium 432

[Ref.: #122381]

Culture medium growth

[Ref.: #122381]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #11908]		growth	28 °C
[Ref.: #33778]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #122381]		growth	25-37 °C
[Ref.: #122381]	no	growth	10 °C
[Ref.: #122381]	no	growth	41 °C
[Ref.: #122381]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

	Salt	Tested relation		Salt conc.
[Ref.: #122381]	NaCl		growth	8-10	%
[Ref.: #122381]	NaCl	no	growth	0	%
[Ref.: #122381]	NaCl	no	growth	2	%
[Ref.: #122381]	NaCl	no	growth	4	%
[Ref.: #122381]	NaCl	no	growth	6	%

[Ref.: #67770]

Observation

quinones: MK-9(H₆), MK-10(H₂), MK-10(H₄) (on vitamin-enriched ISP 2 medium), MK-10(H₄), MK-10(H₆), MK-10(H₂), MK-10(H₈), MK-10 (on glucose-yeast extract medium)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #122381]	citrate ChEBI	-	carbon source
[Ref.: #122381]	esculin ChEBI	-	hydrolysis
[Ref.: #122381]	hippurate ChEBI	-	hydrolysis
[Ref.: #122381]	nitrate ChEBI	-	reduction
[Ref.: #122381]	nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #122381]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #122381]		acetoin ChEBI	-
[Ref.: #122381]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #122381]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #122381]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #122381]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #122381]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #122381]	gelatinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #122381]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #122381]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122381]	oxidase	-
[Ref.: #122381]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #122381]	tryptophan deaminase	-
[Ref.: #122381]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #122381]	10302	-	-	+	-	-	+	-	-	-	+	-	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11908]	Sample type/isolated from	soil sample from a salt lake
[Ref.: #11908]	Country	China
[Ref.: #11908]	Country ISO 3 Code	CHN
[Ref.: #11908]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil from a salt lake
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xinjiang
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #122381]	Sample type/isolated from	Environment, Soil, salt lake
[Ref.: #122381]	Geographic location (country and/or sea, region)	Xinjiang
[Ref.: #122381]	Country	China
[Ref.: #122381]	Country ISO 3 Code	CHN
[Ref.: #122381]	Continent	Asia
[Ref.: #122381]	Isolation date	1998
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Terrestrial	#Soil
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF178988 (>99% sequence identity) for Streptomonospora salina from Microbeatlas

Aquatic Samples
Soil Samples	1
Animal Samples
Plant Samples
Total Samples	1

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11908]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #122381]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #11908]	Streptomonospora salina 16S ribosomal RNA gene, partial sequence	AF178988	1529	GenBank ENA	104205 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomonospora salina DSM 44593	GCA_014204715	contig	GenBank ENA	104205 tax ID	*
[Ref.: #66792]	Streptomonospora salina strain DSM 44593	104205.3	wgs	PATRIC	104205 tax ID	*
[Ref.: #66792]	Streptomonospora salina DSM 44593	2867995764	draft	JGI IMG/M	104205 tax ID	*

[Ref.: #67770]

GC-content

72.9 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomonospora salina strain DSM 44593 PATRIC: 104205.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	84	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomonospora salina strain DSM 44593 PATRIC: 104205.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	87.301	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.107	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	77.844	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.142	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	91.903	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	92.5	no

Availability in culture collections External links

[Ref.: #11908]

Culture collection no.

DSM 44593, CCRC 16284, CCTCC 99003, YIM 90002, JCM 11823, BCRC 16284, CIP 107368, KCTC 19919, NBRC 105862

[Ref.: #80479]

SI-ID 100971

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomonospora litoralis sp. nov., a halophilic thiopeptides producer isolated from sand collected at Cuxhaven beach.	Khodamoradi S, Hahnke RL, Mast Y, Schumann P, Kampfer P, Steinert M, Ruckert C, Surup F, Rohde M, Wink J	Antonie Van Leeuwenhoek	10.1007/s10482-021-01609-4	2021	*
Phylogeny	Streptomonospora alba sp. nov., a novel halophilic actinomycete, and emended description of the genus Streptomonospora Cui et al. 2001.	Li WJ, Xu P, Zhang LP, Tang SK, Cui XL, Mao PH, Xu LH, Schumann P, Stackebrandt E, Jiang CL	Int J Syst Evol Microbiol	10.1099/ijs.0.02543-0	2003	*
Phylogeny	Streptimonospora salina gen. nov., sp. nov., a new member of the family Nocardiopsaceae.	Cui XL, Mao PH, Zeng M, Li WJ, Zhang LP, Xu LH, Jiang CL	Int J Syst Evol Microbiol	10.1099/00207713-51-2-357	2001	*

References

#11908

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44593

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#33778 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#80479

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100971.1 )

#122381 Collection of Institut Pasteur ; Curators of the CIP; CIP 107368
* These data were automatically processed and therefore are not curated

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Streptomonospora salina strain DSM 44593

Streptomonospora salina strain DSM 44593

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