Name: Nocardiopsis exhalans ES-10.1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 11205

Type strain:

Species: Nocardiopsis exhalans

Strain Designation: ES-10.1

Culture col. no.: DSM 44407, JCM 11759, NRRL B-24123, NBRC 100346, VTT E-062617

Strain history: DSM 44407 <-- M. Salkinoja-Salonen ES10.1.

NCBI tax ID(s): 163604 (species)

SI-ID 50616

DSM 44407, NRRL B-24123, JCM 11759, NBRC 100346, VTT E-062617

Special Collections

DSMZ
JCM

Other strains from Nocardiopsis exhalans

Section

Nocardiopsis exhalans ES-10.1 is a bacterium that was isolated from indoor air of a water damaged private house.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Nocardiopsidaceae*
	Genus	*Nocardiopsis*
	Species	**Nocardiopsis exhalans**
	Full Scientific Name (LPSN)	Nocardiopsis exhalans Peltola et al. 2002

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11740]

Culture medium

CZAPEK PEPTONE AGAR (DSMZ Medium 83)

[Ref.: #11740]

Culture medium growth

[Ref.: #11740]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11740]

Culture medium composition

expand / minimize

[Ref.: #11740]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #11740]

Culture medium growth

[Ref.: #11740]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11740]

Culture medium composition

expand / minimize

[Ref.: #11740]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #11740]

Culture medium growth

[Ref.: #11740]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11740]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #11740]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-10(H₆), MK-10(H₈)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11740]	Sample type/isolated from	indoor air of a water damaged private house
[Ref.: #11740]	Country	Finland
[Ref.: #11740]	Country ISO 3 Code	FIN
[Ref.: #11740]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Indoor air of the basement of a water-damaged building
* marker position based on {}

Isolation sources categories

#Engineered	#Built environment	#House
#Environmental	#Air	#Indoor Air

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY028325 (>99% sequence identity) for Nocardiopsis from Microbeatlas

Aquatic Samples	1
Soil Samples	2
Animal Samples	23
Plant Samples
Total Samples	26

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11740]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #11740]	Nocardiopsis exhalans strain ES10.1 16S ribosomal RNA gene, partial sequence	AY028325	1457	GenBank ENA	163604 tax ID
[Ref.: #124043]	Nocardiopsis exhalans gene for 16S rRNA, partial sequence.	AB368714	1457	GenBank ENA	163604 tax ID	*

Availability in culture collections External links

[Ref.: #11740]

Culture collection no.

DSM 44407, JCM 11759, NRRL B-24123, NBRC 100346, VTT E-062617

[Ref.: #80451]

SI-ID 50616

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete Genome Sequence of Nocardiopsis exhalans Strain JCM 11759(T), Isolated from Indoor Air of a Water-Damaged Private House in Finland.	Chen D, Mo P, Li B	Microbiol Resour Announc	10.1128/mra.00930-22	2022	*

References

#11740

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44407

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80451

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID50616.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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