Strain identifier
BacDive ID: 11205
Type strain: 
Species: Nocardiopsis exhalans
Strain Designation: ES-10.1
Strain history: DSM 44407 <-- M. Salkinoja-Salonen ES10.1.
NCBI tax ID(s): 163604 (species)
version 8.1 (current version)
General
@ref: 11740
BacDive-ID: 11205
DSM-Number: 44407
keywords: 16S sequence, Bacteria, mesophilic
description: Nocardiopsis exhalans ES-10.1 is a mesophilic bacterium that was isolated from indoor air of a water damaged private house.
NCBI tax id
- NCBI tax id: 163604
- Matching level: species
strain history
| @ref | history |
|---|---|
| 11740 | <- M. Salkinoja-Salonen, Univ. Helsinki; ES-10.1 |
| 67770 | DSM 44407 <-- M. Salkinoja-Salonen ES10.1. |
doi: 10.13145/bacdive11205.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Streptosporangiales
- family: Nocardiopsidaceae
- genus: Nocardiopsis
- species: Nocardiopsis exhalans
- full scientific name: Nocardiopsis exhalans Peltola et al. 2002
@ref: 11740
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiopsaceae
genus: Nocardiopsis
species: Nocardiopsis exhalans
full scientific name: Nocardiopsis exhalans Peltola et al. 2002
strain designation: ES-10.1
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 11740 | CZAPEK PEPTONE AGAR (DSMZ Medium 83) | yes | https://mediadive.dsmz.de/medium/83 | Name: CZAPEK PEPTONE AGAR (DSMZ Medium 83) Composition: Sucrose 30.0 g/l Agar 20.0 g/l Peptone 5.0 g/l NaNO3 3.0 g/l Yeast extract 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 0.5 g/l KCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Distilled water |
| 11740 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 11740 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 11740 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-10(H6), MK-10(H8)
Isolation, sampling and environmental information
isolation
| @ref | sample type | country | origin.country | continent |
|---|---|---|---|---|
| 11740 | indoor air of a water damaged private house | Finland | FIN | Europe |
| 67770 | Indoor air of the basement of a water-damaged building |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Built environment | #House |
| #Environmental | #Air | #Indoor Air |
taxonmaps
- @ref: 69479
- File name: preview.99_7141.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_152;96_659;97_762;98_1213;99_7141&stattab=map
- Last taxonomy: Nocardiopsis
- 16S sequence: AY028325
- Sequence Identity:
- Total samples: 26
- soil counts: 2
- aquatic counts: 1
- animal counts: 23
Safety information
risk assessment
- @ref: 11740
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 11740
- description: Nocardiopsis exhalans strain ES10.1 16S ribosomal RNA gene, partial sequence
- accession: AY028325
- length: 1457
- database: ena
- NCBI tax ID: 163604
External links
@ref: 11740
culture collection no.: DSM 44407, JCM 11759, NRRL B-24123, NBRC 100346, VTT E-062617
straininfo link
- @ref: 80451
- straininfo: 50616
literature
- topic: Genetics
- Pubmed-ID: 36326500
- title: Complete Genome Sequence of Nocardiopsis exhalans Strain JCM 11759(T), Isolated from Indoor Air of a Water-Damaged Private House in Finland.
- authors: Chen D, Mo P, Li B
- journal: Microbiol Resour Announc
- DOI: 10.1128/mra.00930-22
- year: 2022
- topic2: Phylogeny
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 11740 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44407) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44407 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 80451 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50616.1 | StrainInfo: A central database for resolving microbial strain identifiers |