Nocardioides dilutus (DSM 19318, KCTC 19288, MSL 11)

Name: Nocardioides dilutus (DSM 19318, KCTC 19288, MSL 11)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11134

Type strain

Culture col. no. DSM 19318 KCTC 19288 MSL 11 JCM 31491

NCBI tax ID(s) 433652

Special Collections DSMZ JCM KCTC

Links

Nocardioides dilutus DSM 19318 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from farming field.

Gram-positive aerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 401771

KCTC 19288,JCM 31491,DSM 19318

@ref 20215

Last LPSN update 2025-12-16 09:49:30

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Propionibacteriales

Family Nocardioidaceae

Genus Nocardioides

Species Nocardioides dilutus

Full scientific name Nocardioides dilutus corrig. Dastager et al. 2009

Synonyms (1)

Nocardioides dilutes

Morphology

Cell morphology

67771

Gram stainpositive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8033	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8033	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic
67771	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

67771

Oxygen toleranceaerobe

Observation

67770

Observationquinones: MK-8(H₄)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Field

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
8033	farming field	Bikeum island	Republic of Korea	KOR	Asia
67770	Soil	Bigeum Island	Republic of Korea	KOR	Asia
67771	From farming field	Bikeum island	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence EF466121 (>99% sequence identity) for Nocardioides dilutus from Microbeatlas

Aquatic Samples	588
Soil Samples	3359
Animal Samples	732
Plant Samples	962
Total Samples	5641

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8033	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8033	Nocardioides dilutus strain MSL-11 16S ribosomal RNA gene, partial sequence	EF466121	1418		433652

GC content

@ref	GC-content (mol%)	Method
8033	71.8
67770	71.8	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Differential roles of deterministic and stochastic processes in structuring soil bacterial ecotypes across terrestrial ecosystems.	Riddley M, Hepp S, Hardeep F, Nayak A, Liu M, Xing X, Zhang H, Liao J.	Nat Commun	10.1038/s41467-025-57526-x	2025
Phylogeny	Lower Genital Tract Microbiome in Early Pregnancy in the Eastern European Population.	Gryaznova M, Lebedeva O, Kozarenko O, Smirnova Y, Burakova I, Syromyatnikov M, Maslov A, Popov V.	Microorganisms	10.3390/microorganisms10122368	2022
Phylogeny	Nocardioides dilutes sp. nov. isolated from soil in Bigeum Island, Korea.	Dastager SG, Lee JC, Ju YJ, Park DJ, Kim CJ	Curr Microbiol	10.1007/s00284-008-9125-9	2008

References

#8033	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19318
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Nocardioides dilutus (DSM 19318, KCTC 19288, MSL 11)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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