Name: Neobacillus niacini DSM 2923
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1091

Type strain:

Species: Neobacillus niacini

Culture col. no.: DSM 2923, IFO 15566, NBRC 15566, JCM 12306, CGMCC 1.3663, CIP 104585, IAM 15261, KCTC 3562, LMG 16677, NCIMB 13159, NRRL B-23384

Strain history: CIP <- 1995, DSM <- J.C. Ensign

NCBI tax ID(s): 1348654 (strain), 86668 (species)

SI-ID 8359

LMG 16677, DSM 2923, IFO 15566, NCIMB 13159, CIP 104585, KCTC 3562, JCM 12306, KACC 10894, NRRL B-23384, NBRC 15566, IAM 15261, CGMCC 1.3663

Special Collections

Other strains from Neobacillus niacini

Section

Neobacillus niacini DSM 2923 is a spore-forming bacterium that was isolated from soil.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Neobacillus*
	Species	**Neobacillus niacini**
	Full Scientific Name (LPSN)	Neobacillus niacini (Nagel and Andreesen 1991) Patel and Gupta 2020

Synonym

Bacillus niacini

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1249]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #1249]

Culture medium growth

[Ref.: #1249]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1249]

Culture medium composition

expand / minimize

[Ref.: #39059]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #39059]

Culture medium growth

[Ref.: #39059]

Culture medium composition

expand / minimize

[Ref.: #121289]

Culture medium

CIP Medium 3

[Ref.: #121289]

Culture medium growth

[Ref.: #121289]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #1249]	growth	30 °C
[Ref.: #39059]	growth	30 °C
[Ref.: #67770]	growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

yes Confidence in %91.771

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1249]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil

[Ref.: #121289]	Sample type/isolated from	Environment, Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1249]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #121289]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Bacillus niacini gene for 16S ribosomal RNA	AB021194	1526	GenBank ENA	86668 tax ID	*
[Ref.: #20218]	Bacillus niacini gene for 16S rRNA, partial sequence, strain: NBRC 15566	AB680904	1475	GenBank ENA	86668 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Neobacillus niacini NBRC 15566	GCA_001591505	contig	GenBank ENA	1348654 tax ID
[Ref.: #67770]	Neobacillus niacini DSM 2923	GCA_000768265	scaffold	GenBank ENA	86668 tax ID
[Ref.: #66792]	Bacillus niacini DSM 2923	86668.4	wgs	PATRIC	86668 tax ID	*
[Ref.: #66792]	Bacillus niacini NBRC 15566	1348654.3	wgs	PATRIC	1348654 tax ID	*
[Ref.: #66792]	Bacillus niacini NBRC 15566	2675903663	draft	JGI IMG/M	1348654 tax ID	*
[Ref.: #66792]	Bacillus niacini DSM 2923	2630968697	draft	JGI IMG/M	86668 tax ID	*

[Ref.: #67770]

GC-content

37 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus niacini NBRC 15566 PATRIC: 1348654.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	69.888	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.748	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	91.771	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	59.704	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	91.134	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	59.456	no

Availability in culture collections External links

[Ref.: #1249]

Culture collection no.

DSM 2923, IFO 15566, NBRC 15566, JCM 12306, CGMCC 1.3663, CIP 104585, IAM 15261, KCTC 3562, LMG 16677, NCIMB 13159, NRRL B-23384

[Ref.: #70763]

SI-ID 8359

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus salipaludis sp. nov., isolated from saline-alkaline soil.	Xue L, Tang L, Zhao J, Fang Z, Liu H, Qiao J, Zhang G	Arch Microbiol	10.1007/s00203-021-02239-0	2021	*
Genetics	Draft Genome Sequence of the Nicotinate-Metabolizing Soil Bacterium Bacillus niacini DSM 2923.	Harvey ZH, Snider MJ	Genome Announc	10.1128/genomeA.01251-14	2014	*
Phylogeny	Thermotolerant Bacillus kokeshiiformis sp. nov. isolated from marine animal resources compost.	Poudel P, Miyamoto H, Miyamoto H, Okugawa Y, Tashiro Y, Sakai K	Int J Syst Evol Microbiol	10.1099/ijs.0.059329-0	2014	*
Phylogeny	Bacillus ginsengisoli sp. nov., isolated from soil of a ginseng field.	Nguyen NL, Kim YJ, Hoang VA, Min JW, Liang ZQ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.031740-0	2012	*
Phylogeny	Ornithinibacillus gen. nov., with the species Ornithinibacillus bavariensis sp. nov. and Ornithinibacillus californiensis sp. nov.	Mayr R, Busse HJ, Worliczek HL, Ehling-Schulz M, Scherer S	Int J Syst Evol Microbiol	10.1099/ijs.0.64038-0	2006	*

References

#1249

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2923

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39059 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#70763

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID8359.1 )

#121289 Collection of Institut Pasteur ; Curators of the CIP; CIP 104585
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Neobacillus niacini in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Bacillus niacini NBRC 15566

Change proposal

Change proposal