Neobacillus niacini (DSM 2923, IFO 15566, NBRC 15566)

Name: Neobacillus niacini (DSM 2923, IFO 15566, NBRC 15566)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1091

Type strain

Culture col. no. DSM 2923 IFO 15566 NBRC 15566 NRRL B-23384 NCIMB 13159 6 more

NCBI tax ID(s) 1348654 86668

Special Collections DSMZ JCM KCTC CIP

History DSMZ <- J.C. Ensign JCM <-- DSM 2923 <-- J. C. Ensign. CIP <- 1995, DSM <- J.C. Ensign

Links

Neobacillus niacini DSM 2923 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 8359

LMG 16677,DSM 2923,IFO 15566,NCIMB 13159,CIP 104585,KCTC 3562,JCM 12306,KACC 10894,NRRL B-23384,NBRC 15566,IAM 15261,CGMCC 1.3663

@ref 20215

Last LPSN update 2026-05-29 08:25:10

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Cytobacillaceae

Genus Neobacillus

Species Neobacillus niacini

Full scientific name Neobacillus niacini (Nagel and Andreesen 1991) Patel and Gupta 2020

Synonyms (1)

Bacillus niacini

BacDive ID	Other strains from **Neobacillus niacini** (2)	Type strain
1092	N. niacini W14/2, DSM 30784
162595	N. niacini JCM 19735

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
1249	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
39059	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
121289	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
1249	positive	growth	30
39059	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96.672

Spore formation

@ref	Spore formation	Confidence
125438		91.771
125439		94.419

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type
1249	soil
67770	Soil
121289	Environment, Soil

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1249	1	Risk group (German classification) According to TRBA 466
121289	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM159150v1 assembly for Neobacillus niacini NBRC 15566	contig	GCA_001591505	1348654.3	2675903663	1348654	54.84
67770	ASM76826v1 assembly for Neobacillus niacini DSM 2923	scaffold	GCA_000768265	86668.4	2630968697	86668	0

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Bacillus niacini gene for 16S ribosomal RNA	AB021194	1526	86668
20218	Bacillus niacini gene for 16S rRNA, partial sequence, strain: NBRC 15566	AB680904	1475	86668
124043	Bacillus niacini strain NBRC 15566 16S ribosomal RNA gene, partial sequence.	MG322248	609	86668
124043	Bacillus niacini strain NBRC 15566 16S ribosomal RNA gene, partial sequence.	MG645270	815	86668

GC content

@ref	GC-content (mol%)	Method
67770	37	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM159150v1 assembly for Neobacillus niacini NBRC 15566
BV-BRC: 1348654.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.67	no
125439	gram_stain	BacteriaNetⓘ	variable	62.74	no
125439	motility	BacteriaNetⓘ	yes	79.96	no
125439	spore_formation	BacteriaNetⓘ	yes	94.42	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacillus niacini NBRC 15566
PATRIC: 1348654.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	69.89	no
125438	anaerobic	anaerobicⓘ	no	95.75	no
125438	spore-forming	spore-formingⓘ	yes	91.77	no
125438	aerobic	aerobicⓘ	yes	59.70	no
125438	thermophilic	thermophileⓘ	no	91.13	yes
125438	flagellated	motile2+ⓘ	yes	59.46	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Structural and Functional Characterization of a Novel Class A Flavin Monooxygenase from Bacillus niacini.	Richardson BC, Turlington ZR, Vaz Ferreira de Macedo S, Phillips SK, Perry K, Brancato SG, Cooke EW, Gwilt JR, Dasovich MA, Roering AJ, Rossi FM, Snider MJ, French JB, Hicks KA.	Biochemistry	10.1021/acs.biochem.4c00306	2024
Phylogeny	Beneficial bacteria activate nutrients and promote wheat growth under conditions of reduced fertilizer application.	Wang J, Li R, Zhang H, Wei G, Li Z.	BMC Microbiol	10.1186/s12866-020-1708-z	2020
	Diversity and functional assessment of indigenous culturable bacteria inhabiting fine-flavor cacao rhizosphere: Uncovering antagonistic potential against Moniliophthora roreri.	Crisostomo-Panuera JS, Nieva ASDV, Ix-Balam MA, Diaz-Valderrama JR, Alviarez-Gutierrez E, Oliva-Cruz SM, Cumpa-Velasquez LM.	Heliyon	10.1016/j.heliyon.2024.e28453	2024
Genetics	Draft Genome Sequence of the Nicotinate-Metabolizing Soil Bacterium Bacillus niacini DSM 2923.	Harvey ZH, Snider MJ	Genome Announc	10.1128/genomeA.01251-14	2014
Phylogeny	Neobacillus driksii sp. nov. isolated from a Mars 2020 spacecraft assembly facility and genomic potential for lasso peptide production in Neobacillus.	Hameed A, McDonagh F, Sengupta P, Miliotis G, Sivabalan SKM, Szydlowski L, Simpson A, Singh NK, Rekha PD, Raman K, Venkateswaran K.	Microbiol Spectr	10.1128/spectrum.01376-24	2025
Phylogeny	Bacillus salipaludis sp. nov., isolated from saline-alkaline soil.	Xue L, Tang L, Zhao J, Fang Z, Liu H, Qiao J, Zhang G	Arch Microbiol	10.1007/s00203-021-02239-0	2021
Phylogeny	Thermotolerant Bacillus kokeshiiformis sp. nov. isolated from marine animal resources compost.	Poudel P, Miyamoto H, Miyamoto H, Okugawa Y, Tashiro Y, Sakai K	Int J Syst Evol Microbiol	10.1099/ijs.0.059329-0	2014
Phylogeny	Bacillus ginsengisoli sp. nov., isolated from soil of a ginseng field.	Nguyen NL, Kim YJ, Hoang VA, Min JW, Liang ZQ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.031740-0	2012
Phylogeny	Ornithinibacillus gen. nov., with the species Ornithinibacillus bavariensis sp. nov. and Ornithinibacillus californiensis sp. nov.	Mayr R, Busse HJ, Worliczek HL, Ehling-Schulz M, Scherer S	Int J Syst Evol Microbiol	10.1099/ijs.0.64038-0	2006

References

#1249	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2923
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39059	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#121289	Collection of Institut Pasteur ; Curators of the CIP; CIP 104585
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Neobacillus niacini (DSM 2923, IFO 15566, NBRC 15566)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001591505

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media