Name: Neobacillus niacini DSM 2923
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1091

Type strain:

Species: Neobacillus niacini

Culture col. no.: DSM 2923, IFO 15566, NBRC 15566, JCM 12306, CGMCC 1.3663, CIP 104585, IAM 15261, KCTC 3562, LMG 16677, NCIMB 13159, NRRL B-23384

Strain history: CIP <- 1995, DSM <- J.C. Ensign

NCBI tax ID(s): 1348654 (strain), 86668 (species)

SI-ID 8359

LMG 16677, DSM 2923, IFO 15566, NCIMB 13159, CIP 104585, KCTC 3562, JCM 12306, KACC 10894, NRRL B-23384, NBRC 15566, IAM 15261, CGMCC 1.3663

Other strains from Neobacillus niacini

N. niacini W14/2, DSM 30784
N. niacini JCM 19735

Section

Neobacillus niacini DSM 2923 is a mesophilic bacterium that was isolated from soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Neobacillus*
	Species	**Neobacillus niacini**
	Full Scientific Name (LPSN)	Neobacillus niacini (Nagel and Andreesen 1991) Patel and Gupta 2020

Synonym

Bacillus niacini

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1249]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #1249]

Culture medium growth

[Ref.: #1249]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1249]

Culture medium composition

expand / minimize

[Ref.: #39059]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #39059]

Culture medium growth

[Ref.: #39059]

Culture medium composition

expand / minimize

[Ref.: #121289]

Culture medium

CIP Medium 3

[Ref.: #121289]

Culture medium growth

[Ref.: #121289]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #1249]	growth	30 °C
[Ref.: #39059]	growth	30 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #1249]	Temperature range	mesophilic
[Ref.: #39059]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1249]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil

[Ref.: #121289]	Sample type/isolated from	Environment, Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1249]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #121289]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Bacillus niacini gene for 16S ribosomal RNA	AB021194	1526	ENA	86668 tax ID	*
[Ref.: #20218]	Bacillus niacini gene for 16S rRNA, partial sequence, strain: NBRC 15566	AB680904	1475	ENA	86668 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Neobacillus niacini NBRC 15566	GCA_001591505	contig	GenBank	1348654 tax ID
[Ref.: #67770]	Neobacillus niacini DSM 2923	GCA_000768265	scaffold	GenBank	86668 tax ID
[Ref.: #66792]	Bacillus niacini DSM 2923	86668.4	wgs	PATRIC	86668 tax ID	*
[Ref.: #66792]	Bacillus niacini NBRC 15566	1348654.3	wgs	PATRIC	1348654 tax ID	*
[Ref.: #66792]	Bacillus niacini NBRC 15566	2675903663	draft	JGI IMG/M	1348654 tax ID	*
[Ref.: #66792]	Bacillus niacini DSM 2923	2630968697	draft	JGI IMG/M	86668 tax ID	*

[Ref.: #67770]

GC-content

37 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus niacini NBRC 15566 PATRIC: 1348654.3
[Ref.: #69480]	motile	yes	84.945	no
[Ref.: #69480]	gram-positive	yes	83.196	no
[Ref.: #69480]	anaerobic	no	96.696	no
[Ref.: #69480]	halophile	no	83.546	no
[Ref.: #69480]	spore-forming	yes	91.455	no
[Ref.: #69480]	thermophile	no	98.804	yes
[Ref.: #69480]	glucose-util	yes	86.534	no
[Ref.: #69480]	aerobic	yes	69.961	no
[Ref.: #69480]	flagellated	yes	77.354	no
[Ref.: #69480]	glucose-ferment	no	88.637	no

Availability in culture collections External links

[Ref.: #1249]

Culture collection no.

DSM 2923, IFO 15566, NBRC 15566, JCM 12306, CGMCC 1.3663, CIP 104585, IAM 15261, KCTC 3562, LMG 16677, NCIMB 13159, NRRL B-23384

[Ref.: #70763]

SI-ID 8359

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus salipaludis sp. nov., isolated from saline-alkaline soil.	Xue L, Tang L, Zhao J, Fang Z, Liu H, Qiao J, Zhang G	Arch Microbiol	10.1007/s00203-021-02239-0	2021	*
Genetics	Draft Genome Sequence of the Nicotinate-Metabolizing Soil Bacterium Bacillus niacini DSM 2923.	Harvey ZH, Snider MJ	Genome Announc	10.1128/genomeA.01251-14	2014	*
Phylogeny	Thermotolerant Bacillus kokeshiiformis sp. nov. isolated from marine animal resources compost.	Poudel P, Miyamoto H, Miyamoto H, Okugawa Y, Tashiro Y, Sakai K	Int J Syst Evol Microbiol	10.1099/ijs.0.059329-0	2014	*
Phylogeny	Bacillus ginsengisoli sp. nov., isolated from soil of a ginseng field.	Nguyen NL, Kim YJ, Hoang VA, Min JW, Liang ZQ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.031740-0	2012	*
Phylogeny	Ornithinibacillus gen. nov., with the species Ornithinibacillus bavariensis sp. nov. and Ornithinibacillus californiensis sp. nov.	Mayr R, Busse HJ, Worliczek HL, Ehling-Schulz M, Scherer S	Int J Syst Evol Microbiol	10.1099/ijs.0.64038-0	2006	*

References

#1249

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2923

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39059 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#70763

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID8359.1 )

#121289 Collection of Institut Pasteur ; Curators of the CIP; CIP 104585
* These data were automatically processed and therefore are not curated

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Bacillus niacini NBRC 15566

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