Rhodococcus fascians (DSM 20669, ATCC 12974, CIP 104713)

Name: Rhodococcus fascians (DSM 20669, ATCC 12974, CIP 104713)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10883

Type strain

Culture col. no. DSM 20669 ATCC 12974 CIP 104713 IFO 12155 JCM 1316 19 more

NCBI tax ID(s) 1219015 1828

Special Collections DSMZ CCUG JCM KCTC CIP

Links

Rhodococcus fascians DSM 20669 is an aerobe, mesophilic, Gram-positive plant pathogen that was isolated from Fasciation of sweet peas .

Gram-positive oval-shaped aerobe mesophilic plant pathogen genome sequence 16S sequence

Name and taxonomic classification

SI-ID 92423

LMG 3623,ATCC 12974,DSM 20669,IAM 12427,ICMP 5833,IFO 12155,JCM 1316,NCPPB 3067,PDDCC 5833,MTCC 1531,CIP 104713,CIP 104185,JCM 10002,CCRC 13609,NRRL B-16937,VKM Ac-1462,NCIMB 13432,KCTC 9813,NBRC 12155,CFBP 2401,NBRC 100625,BCRC 13609,CDBB 54,CCUG 51073,CNCTC 6669,CGMCC 4.1817

@ref 20215

Last LPSN update 2025-12-16 09:49:26

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Nocardiaceae

Genus Rhodococcus

Species Rhodococcus fascians

Full scientific name Rhodococcus fascians (Tilford 1936) Goodfellow 1984

Synonyms (4)

Rhodococcoides fascians
Rhodococcus luteus
Corynebacterium fascians
"Phytomonas fascians"

BacDive ID	Other strains from **Rhodococcus fascians** (23)	Type strain
8455	R. fascians TBC 4351/91, DSM 44418
10882	R. fascians CF 19, CF 107(505), DSM 20131, ATCC 12975, ...
10884	R. fascians 81N-Sch, DSM 43586
10885	R. fascians DSM 43673, ATCC 35014, AUCNM A-594, JCM 6162, ...
10886	R. fascians N 1026, DSM 43985, IMV 29
10887	R. fascians N 1062, DSM 43987
10888	R. fascians VI, DSM 44425
10889	R. fascians B2L3, DSM 44858
10890	R. fascians DSM 45106, BEM 660
10891	R. fascians DSM 46103, CIP 104629, IMET 7762, VKM Ac-868
103559	R. fascians ST033347(HKI),
134414	R. fascians C676, CIP 104669, LMG 3614, NCPPB 2211
136326	R. fascians CIP 104645, IAM 1279, IFO 12077
136327	R. fascians CIP 104643, LMG 3626
137089	R. fascians CIP 104504, IMV 187, JCM 6163, VKM Ac-986
137090	R. fascians CIP 104505, IMV 419, JCM 6164, VKM Ac-991
137274	R. fascians 56/2a, CIP 104670, LMG 3618, NCPPB 2553
137275	R. fascians CIP 104671, LMG 3633
151837	R. fascians CCUG 45011
152269	R. fascians CCUG 46265
152981	R. fascians CCUG 48189
154524	R. fascians CCUG 54217
165353	R. fascians JCM 6165, IMV 27, VKM Ac-1006

Morphology

Cell morphology

@ref	Gram stain	Cell shape
119291	positive	oval-shaped
125438
125439	positive

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8991	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
8991	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
37045	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
119291	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8991	positive	growth	30	mesophilic
37045	positive	growth	30	mesophilic
59099	positive	growth	30	mesophilic
67770	positive	growth	28	mesophilic
119291	positive	growth	10-30
119291	negative	growth	37
119291	negative	growth	41
119291	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
59099	aerobe
119291	obligate aerobe
125439	obligate aerobe

Compound production

@ref	Compound
8991	5' nucleotides
20216	5'-nucleotides

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119291	NaCl	positive	growth	0-6 %
119291	NaCl		growth	8 %
119291	NaCl		growth	10 %

Observation

67770

Observationquinones: MK-8(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
119291	16947 ChEBI	citrate	+	carbon source
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
119291	4853 ChEBI	esculin	-	hydrolysis
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
119291	17632 ChEBI	nitrate	-	reduction
119291	17632 ChEBI	nitrate	-	respiration
119291	16301 ChEBI	nitrite	-	reduction
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne

Metabolite production

@ref	Chebi-ID	Metabolite	Production
119291	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
119291	15688 ChEBI	acetoin	-
119291	17234 ChEBI	glucose

Enzymes

@ref	Value	Activity	Ec
119291	alcohol dehydrogenase	-	1.1.1.1
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
119291	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
119291	beta-galactosidase	+	3.2.1.23
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
119291	caseinase	-	3.4.21.50
119291	catalase	+	1.11.1.6
119291	DNase	-
68382	esterase lipase (C 8)	+		from API zym
119291	gamma-glutamyltransferase	-	2.3.2.2
119291	gelatinase	-
68379	gelatinase	-		from API Coryne
119291	lecithinase	-
68382	lipase (C 14)	-		from API zym
119291	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
119291	ornithine decarboxylase	-	4.1.1.17
119291	oxidase	-
68379	pyrazinamidase	+	3.5.1.B15	from API Coryne
119291	tryptophan deaminase	-
119291	tween esterase	-
119291	urease	+	3.5.1.5
68379	urease	-	3.5.1.5	from API Coryne
68382	valine arylamidase	-		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
8991	-	+	+/-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
8991	-	-	-	+	-	+/-	-	+/-	-	-	+/-	-	-	-	-	+/-	-	-	-	-
119291	-	+	+	+	-	+	-	+	+	-	+	-	-	-	-	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
119291	not determinedn.d.	-	+	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	+	-	+	-	-	+	-	-	-	-	-	-	-	-	+	-	-	-	+	+	+	-	+	-	-	-	+	-	-	-	+	-	+	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	+	-	-	-	-	+	-	+	+	+	+

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species
67770	Fasciation of sweet peas (Lathyrus odoratus)	Lathyrus odoratus

Taxonmaps

69479

Global distribution of 16S sequence X81930 (>99% sequence identity) for Rhodococcus fascians from Microbeatlas

Aquatic Samples	1939
Soil Samples	894
Animal Samples	3728
Plant Samples	436
Total Samples	6997

Interaction and safety

Risk assessment

@ref	Pathogenicity plant	Biosafety level	Biosafety level comment
8991		1	Risk group (German classification) According to TRBA 466
119291		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
67770	ASM189478v1 assembly for Rhodococcoides fascians NBRC 12155 = LMG 3623	contig	GCA_001894785	1219015.4	1219015	71.62
67770	R_fas_LMG3623 assembly for Rhodococcoides fascians NBRC 12155 = LMG 3623	scaffold	GCA_000761055	1219015.3	1219015	64.25
66792	ASM33395v1 assembly for Rhodococcus sp. AW25M09	contig	GCA_000333955	1268303.4	1268303	45.77

Genome browser: GCA_001894785

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	R.fascians 16S rRNA gene (ATCC 12974T)	X81930	1314	1828
20218	R.fascians (DSM 20669) 16S rRNA gene	X79186	1424	1828
124043	Rhodococcus fascians strain LMG 3623(T) 16S ribosomal RNA gene, partial sequence.	MN686685	510	1828
124043	Rhodococcus fascians strain LMG 3623(T) 16S ribosomal RNA gene, partial sequence.	MN686663	593	1828

GC content

@ref	GC-content (mol%)	Method
67770	64.4	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Rhodococcus fascians NBRC 12155 = LMG 3623
NCBI: GCA_000761055

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.50	no
125439	gram_stain	BacteriaNetⓘ	positive	96.00	no
125439	motility	BacteriaNetⓘ	no	80.70	no
125439	spore_formation	BacteriaNetⓘ	no	50.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Rhodococcus fascians NBRC 12155 = LMG 3623
PATRIC: 1219015.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.10	no
125438	anaerobic	anaerobicⓘ	no	97.42	yes
125438	spore-forming	spore-formingⓘ	no	59.96	no
125438	aerobic	aerobicⓘ	yes	88.31	yes
125438	thermophilic	thermophileⓘ	no	96.00	no
125438	flagellated	motile2+ⓘ	no	91.50	no

Literature

Title	Authors	Journal	DOI	Year
Draft Genome Sequence of the Actinomycete Rhodococcus sp. Strain AW25M09, Isolated from the Hadsel Fjord, Northern Norway.	Hjerde E, Pierechod MM, Williamson AK, Bjerga GE, Willassen NP, Smalas AO, Altermark B.	Genome Announc	10.1128/genomea.00055-13	2013
Horizontal Spread of Rhodococcus equi Macrolide Resistance Plasmid pRErm46 across Environmental Actinobacteria.	Alvarez-Narvaez S, Giguere S, Berghaus LJ, Dailey C, Vazquez-Boland JA.	Appl Environ Microbiol	10.1128/aem.00108-20	2020
Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost.	Goordial J, Raymond-Bouchard I, Ronholm J, Shapiro N, Woyke T, Whyte L, Bakermans C.	Stand Genomic Sci	10.1186/s40793-015-0043-8	2015
Assessing the effect of temperature on Rhodococcus metabolite production.	Macias-Contreras MI, Millan-Aguinaga N, Parra J, Duncan KR.	Microbiology (Reading)	10.1099/mic.0.001598	2025
Identification of a Novel Class of Photolyases as Possible Ancestors of Their Family.	Xu L, Chen S, Wen B, Shi H, Chi C, Liu C, Wang K, Tao X, Wang M, Lv J, Yan L, Ling L, Zhu G.	Mol Biol Evol	10.1093/molbev/msab191	2021
Validation of the Peel Plate Staphylococcus Aureus (SA) Test for Enumeration of S. aureus in Selected Foods and Non-Cultured Dairy Products: AOAC Performance Tested MethodSM 082401.	Salter RS, Durbin GW, Li S, Gilbert M, Crowley ES, Deterding A, Bastin B.	J AOAC Int	10.1093/jaoacint/qsae083	2025
Fasciation induction by the phytopathogen Rhodococcus fascians depends upon a linear plasmid encoding a cytokinin synthase gene.	Crespi M, Messens E, Caplan AB, van Montagu M, Desomer J.	EMBO J	10.1002/j.1460-2075.1992.tb05116.x	1992
Genome Sequences of Plant-Associated Rhodococcus sp. Isolates from Tunisia.	Dhaouadi S, Win J, Mougou AH, Harant A, Kamoun S, Rhouma A.	Microbiol Resour Announc	10.1128/mra.00293-20	2020
Surfactants tailored by the class Actinobacteria.	Kugler JH, Le Roes-Hill M, Syldatk C, Hausmann R.	Front Microbiol	10.3389/fmicb.2015.00212	2015
Genetic analysis of Clavibacter toxicus, the agent of annual ryegrass toxicity.	Johnston MS, Sutherland SS, Constantine CC, Hampson DJ.	Epidemiol Infect	10.1017/s0950268800001588	1996
Microorganisms and enzymes involved in polybutylene adipate terephthalate biodegradation.	Fernandes M, Vicente AA, Salvador AF.	Appl Microbiol Biotechnol	10.1007/s00253-025-13565-4	2025
The ant Lasius niger is a new source of bacterial enzymes with biotechnological potential for bleaching dye.	Diez-Mendez A, Garcia-Fraile P, Solano F, Rivas R.	Sci Rep	10.1038/s41598-019-51669-w	2019
Characterization of antarctic hydrocarbon-degrading bacteria capable of producing bioemulsifiers.	Yakimov MM, Giuliano L, Bruni V, Scarfi S, Golyshin PN	New Microbiol		1999
Pulsed-field gel electrophoresis analysis of the genome of Rhodococcus fascians: genome size and linear and circular replicon composition in virulent and avirulent strains.	Pisabarro A, Correia A, Martin JF	Curr Microbiol	10.1007/s002849900314	1998
Characterization of the rrnB operon of the plant pathogen Rhodococcus fascians and targeted integrations of exogenous genes at rrn loci.	Pisabarro A, Correia A, Martin JF	Appl Environ Microbiol	10.1128/AEM.64.4.1276-1282.1998	1998
Conjugative transfer of cadmium resistance plasmids in Rhodococcus fascians strains.	Desomer J, Dhaese P, Van Montagu M	J Bacteriol	10.1128/jb.170.5.2401-2405.1988	1988
The Predatory Myxobacterium Citreicoccus inhibens gen. nov. sp. nov. Showed Antifungal Activity and Bacteriolytic Property against Phytopathogens.	Zhou Y, Yi S, Zang Y, Yao Q, Zhu H.	Microorganisms	10.3390/microorganisms9102137	2021
Rhodococcus sovatensis sp. nov., an actinomycete isolated from the hypersaline and heliothermal Lake Ursu.	Tancsics A, Mathe I, Benedek T, Toth EM, Atasayar E, Sproer C, Marialigeti K, Felfoldi T, Kriszt B	Int J Syst Evol Microbiol	10.1099/ijsem.0.001514	2017
Rhodococcus cercidiphylli sp. nov., a new endophytic actinobacterium isolated from a Cercidiphyllum japonicum leaf.	Li J, Zhao GZ, Chen HH, Qin S, Xu LH, Jiang CL, Li WJ	Syst Appl Microbiol	10.1016/j.syapm.2008.03.004	2008
Rhodococcus kyotonensis sp. nov., a novel actinomycete isolated from soil.	Li B, Furihata K, Ding LX, Yokota A	Int J Syst Evol Microbiol	10.1099/ijs.0.64770-0	2007
Rhodococcus yunnanensis sp. nov., a mesophilic actinobacterium isolated from forest soil.	Zhang YQ, Li WJ, Kroppenstedt RM, Kim CJ, Chen GZ, Park DJ, Xu LH, Jiang CL	Int J Syst Evol Microbiol	10.1099/ijs.0.63390-0	2005

References

#8991	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20669
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) . Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#37045	; Curators of the CIP;
#59099	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 51073
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119291	Collection of Institut Pasteur ; Curators of the CIP; CIP 104713
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Rhodococcus fascians (DSM 20669, ATCC 12974, CIP 104713)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Compound production

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API coryne

API zym

API biotype100

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001894785

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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