Gordonia terrae (DSM 43249, ATCC 25594, NCTC 10669)

Name: Gordonia terrae (DSM 43249, ATCC 25594, NCTC 10669)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10548

Type strain

Strain Designation 3612

Culture col. no. DSM 43249 ATCC 25594 NCTC 10669 VKM Ac-1023 NRRL B-16283 16 more

NCBI tax ID(s) 1089454 2055

Special Collections DSMZ CCUG JCM KCTC CIP Wink compendium

History <- NCTC KCC A-0206 <-- M. Goodfellow N659 <-- H. Mordarska T5 <-- M. Tsukamura 3612. CIP <- 1994, R. Ruimy, CNRS, Villefranche/Mer, France <- ATCC <- M. Tsukamura: strain 3612

Links

Gordonia terrae 3612 is an obligate aerobe, Gram-positive, rod-shaped bacterium that was isolated from soil.

Gram-positive rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 2983

LMG 5369,ATCC 25594,CCM 2633,CCUG 34959,IMET 7371,JCM 3206,JCM 3229,NCTC 10669,CCUG 12164,CCUG 34318,CIP 104295,CCRC 13382,IFO 16050,NRRL B-16283,VKM Ac-1023,KCTC 9807,NBRC 100016,NBRC 16050,CECT 5707,BCRC 13382,DSM 43249

@ref 20215

Last LPSN update 2026-02-09 11:20:17

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Gordoniaceae

Genus Gordonia

Species Gordonia terrae

Full scientific name Gordonia terrae corrig. (Tsukamura 1971) Stackebrandt et al. 1989

Synonyms (3)

Gordona terrae
Rhodococcus terrae
"Gordona terrae"

BacDive ID	Other strains from **Gordonia terrae** (18)	Type strain
10549	G. terrae 3613, N662, T6, DSM 43342, CIP 104631, CCUG ...
10550	G. terrae DSM 43568, SN 5302
10551	G. terrae DSM 43569, SN 5303
10552	G. terrae N 800, DSM 43964
10553	G. terrae N 803, DSM 43965
10554	G. terrae N 805, DSM 43966
10555	G. terrae N 807, DSM 43967
10556	G. terrae N 809, DSM 43968
10557	G. terrae 3607 (70003), N 890, N890 (R230), N 890 (R ...
10558	G. terrae 3603, DSM 46040, IMET 7427, Tsukamura 3603, ...
138110	G. terrae W 5381, CIP 104939
138132	G. terrae 5382, CIP 104940
142384	G. terrae CCUG 12164
149492	G. terrae CCUG 37835
150144	G. terrae CCUG 39088
151623	G. terrae CCUG 44473
153882	G. terrae CCUG 51493
156420	G. terrae CCUG 61661

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
123454	positive	rod-shaped
125438			91.5
125438	positive		93.06
125439	positive		99.1

Colony morphology

@ref	Colony color	Incubation period	Medium used
19563	Pastel orange	10-14 days	ISP 2
19563	Pastel orange	10-14 days	ISP 3
19563	Pastel orange	10-14 days	ISP 4
19563	Pastel orange	10-14 days	ISP 5
19563	Pastel orange	10-14 days	ISP 6
19563	Pastel orange	10-14 days	ISP 7

Multicellular morphology

@ref	Forms multicellular complex	Medium name
19563		ISP 2
19563		ISP 3
19563		ISP 4
19563		ISP 5
19563		ISP 6
19563		ISP 7

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
10905	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
10905	GLYCEROL-SOIL MEDIUM (DSMZ Medium 80)	Medium recipe at MediaDive	Name: GLYCEROL-SOIL MEDIUM (DSMZ Medium 80) Composition: Glycerol 20.0 g/l Agar 15.0 g/l Peptone 5.0 g/l Beef extract 3.0 g/l Soil extract Distilled water
19563	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
19563	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
19563	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
19563	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
19563	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
19563	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
40688	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
123454	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
10905	positive	growth	37
19563	positive	optimum	37
40688	positive	growth	30
67770	positive	growth	28
123454	positive	growth	30-41
123454	negative	growth	10
123454	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
123454	obligate aerobe
125438	aerobe	91.093
125439	aerobe	96.5

Spore formation

19563

Spore formationno

Compound production

20216

CompoundMycobactin

Halophily

@ref	Salt	Growth	Tested relation	Concentration
19563	NaCl	positive	maximum	5 %

Observation

67770

Observationquinones: MK-9(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
19563	22599 ChEBI	arabinose	+/-
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68368	29016 ChEBI	arginine	+	hydrolysis	from API 20E
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
19563	62968 ChEBI	cellulose	+/-
123454	16947 ChEBI	citrate	+	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68371	18333 ChEBI	D-arabitol	+	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
123454	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
19563	28757 ChEBI	fructose	+/-
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
19563	17234 ChEBI	glucose	+/-
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
123454	606565 ChEBI	hippurate	-	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68379	17716 ChEBI	lactose	+	fermentation	from API Coryne
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68368	25094 ChEBI	lysine	-	degradation	from API 20E
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
19563	29864 ChEBI	mannitol	+/-
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
19563	17268 ChEBI	myo-inositol	+/-
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
123454	17632 ChEBI	nitrate	+	reduction
123454	17632 ChEBI	nitrate	-	respiration
123454	16301 ChEBI	nitrite	-	reduction
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
19563	16634 ChEBI	raffinose	+/-
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
19563	26546 ChEBI	rhamnose	+/-
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
19563	17992 ChEBI	sucrose	+/-
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid
19563	18222 ChEBI	xylose	+/-

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
123454	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
123454	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	+			from API 20E
123454	17234 ChEBI	glucose		-
68368	35581 ChEBI	indole			-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
123454	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
123454	amylase	-
68368	arginine dihydrolase	+	3.5.3.6	from API 20E
68382	beta-galactosidase	-	3.2.1.23	from API zym
123454	beta-galactosidase	-	3.2.1.23
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
123454	caseinase	-	3.4.21.50
123454	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
123454	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
123454	gamma-glutamyltransferase	-	2.3.2.2
123454	gelatinase	-
68379	gelatinase	+		from API Coryne
123454	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
123454	lipase	-
123454	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123454	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
123454	oxidase	-
123454	phenylalanine ammonia-lyase	+	4.3.1.24
123454	protease	-
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
123454	tryptophan deaminase	-
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
123454	tween esterase	-
123454	urease	-	3.5.1.5
68379	urease	+	3.5.1.5	from API Coryne
68368	urease	+	3.5.1.5	from API 20E
68382	valine arylamidase	+		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
19563	-	+	-	+	+	-	+	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
19563	+	-	+	+	-	-	+	-	-	+	+	not determinedn.d.	+	-	-	-	+	+	+	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
19563	not determinedn.d.	+	+	+	-	+	+	+	-	-	+	+	-	-	-	+	+	-	-	-
123454	-	+	+	+	+	+	+	+	+	-	+	+	-	-	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
123454	not determinedn.d.	-	-	+/-	-	-	-	-	-	-	-	+	+	+/-	-	+	-	-	+/-	+/-	-	-	-	-	-	-	-	-	-	-	-	+/-	+/-	-	-	-	-	-	-	-	+/-	-	-	-	-	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
123454	not determinedn.d.	-	+	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type
10905	soil
67770	Soil
123454	Environment, Soil

Taxonmaps

69479

Global distribution of 16S sequence AB920570 (>99% sequence identity) for Gordonia from Microbeatlas

Aquatic Samples	234
Soil Samples	171
Animal Samples	526
Plant Samples	48
Total Samples	979

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10905	2	Risk group (German classification) According to TRBA 466
19563	1	Risk group (German classification) According to TRBA 466
123454	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM169822v1 assembly for Gordonia terrae 3612	complete	GCA_001698225	2055.8	2773857962	2055	99.11
124043	ASM318382v1 assembly for Gordonia terrae NRRL B-16283	complete	GCA_003183825	2055.15	2846673470	2055	98.77
124043	ASM3802489v1 assembly for Gordonia terrae DSM 43249	chromosome	GCA_038024895			2055	89
66792	45296_E02 assembly for Gordonia terrae NCTC10669	contig	GCA_901542405	2055.17	8115347049	2055	78.58
67770	ASM71697v1 assembly for Gordonia terrae NRRL B-16283	contig	GCA_000716975	2055.3	2773857979	2055	57.35
67770	ASM24803v2 assembly for Gordonia terrae NBRC 100016	contig	GCA_000248035	1089454.3	2513237320	1089454	52.7

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	G.terrae 16S rRNA gene (ATCC 25594T)	X81922	1319	2055
20218	Gordonia terrae strain DSM 43249 note copy 1 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536510	429	2055
20218	Gordonia terrae strain DSM 43249 note copy 2 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536511	433	2055
20218	Gordonia terrae strain DSM 43249 note copy 3 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536512	433	2055
20218	Gordonia terrae strain DSM 43249 note copy 4 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536513	433	2055
20218	Gordonia terrae strain DSM 43249 16S ribosomal RNA gene, partial sequence	KF410339	1383	2055
20218	Gordona terrae partial 16S rRNA	X53202	1356	2055
20218	G.terrae (DSM 43249) 16S rRNA gene	X79286	1481	2055
124043	Gordonia terrae strain NBRC 100016 16S ribosomal RNA gene, partial sequence.	MZ276280	1425	2055

GC content

@ref	GC-content (mol%)	Method
67770	64	fluorimetric
67770	67.8	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Gordonia terrae strain 3612
PATRIC: 2055.8

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	96.50	no
125439	gram_stain	BacteriaNetⓘ	positive	99.10	no
125439	motility	BacteriaNetⓘ	no	86.80	no
125439	spore_formation	BacteriaNetⓘ	yes	53.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Gordonia terrae strain 3612
PATRIC: 2055.8

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	93.06	no
125438	anaerobic	anaerobicⓘ	no	98.26	yes
125438	spore-forming	spore-formingⓘ	no	62.35	yes
125438	aerobic	aerobicⓘ	yes	91.09	yes
125438	thermophilic	thermophileⓘ	no	98.00	no
125438	flagellated	motile2+ⓘ	no	91.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Computational host range prediction-The good, the bad, and the ugly.	Howell AA, Versoza CJ, Pfeifer SP.	Virus Evol	10.1093/ve/vead083	2024
Metabolism	Dynamics of bacterial populations during bench-scale bioremediation of oily seawater and desert soil bioaugmented with coastal microbial mats.	Ali N, Dashti N, Salamah S, Sorkhoh N, Al-Awadhi H, Radwan S.	Microb Biotechnol	10.1111/1751-7915.12326	2016
Phylogeny	Sphingopyxis sp. Strain OPL5, an Isoprene-Degrading Bacterium from the Sphingomonadaceae Family Isolated from Oil Palm Leaves.	Larke-Mejia NL, Carrion O, Crombie AT, McGenity TJ, Murrell JC.	Microorganisms	10.3390/microorganisms8101557	2020
Genetics	GenoType NTM-DR Performance Evaluation for Identification of Mycobacterium avium Complex and Mycobacterium abscessus and Determination of Clarithromycin and Amikacin Resistance.	Huh HJ, Kim SY, Shim HJ, Kim DH, Yoo IY, Kang OK, Ki CS, Shin SY, Jhun BW, Shin SJ, Daley CL, Koh WJ, Lee NY.	J Clin Microbiol	10.1128/jcm.00516-19	2019
Phylogeny	Identification of Mycobacterium species by secA1 sequences.	Zelazny AM, Calhoun LB, Li L, Shea YR, Fischer SH.	J Clin Microbiol	10.1128/jcm.43.3.1051-1058.2005	2005
	Draft genome sequence data of Gordonia hongkongensis strain EUFUS-Z928 isolated from the octocoral Eunicea fusca.	Sanchez-Suarez J, Diaz L, Melo-Bolivar J, Villamil L.	Data Brief	10.1016/j.dib.2022.108076	2022
	Complete removal of COD from potato processing wastewater by co-cultivation of Haematococcus pluvialis and Gordonia terrae.	Gao D, Lv J, Xing X, Dong Q, Tian J, Zhou X.	Lett Appl Microbiol	10.1093/lambio/ovaf108	2025
	Genome Sequence of Gordonia terrae Bacteriophage Wheezy.	Heyne RM, Chia CP.	MicroPubl Biol	10.17912/micropub.biology.001407	2025
	Newly isolated halotolerant Gordonia terrae S-LD serves as a microbial cell factory for the bioconversion of used soybean oil into polyhydroxybutyrate.	Xu S, Han R, Tao L, Zhang Z, Gao J, Wang X, Zhao W, Zhang X, Huang Z.	Biotechnol Biofuels Bioprod	10.1186/s13068-025-02613-w	2025
	A Patient of Spontaneous Bacterial Peritonitis in Hepatitis C Cirrhosis Caused by Gordonia terrae: A Case Report.	Zheng W, Liu J, Bai H, Xu X, Wu L, Qin X.	Infect Drug Resist	10.2147/idr.s459821	2024
Genetics	Characterization of the genomes of cluster CT Gordonia terrae phages, Horseradish and Yummy.	Bazinet N, Biro E, Geydoshek A, Hodgkin G, Jestel E, Klute E, MacDonald C, Russano M, Thatcher J, Neely MN, Molloy S.	Microbiol Resour Announc	10.1128/mra.00747-23	2023
	Genome sequence of cluster A15 Gordonia terrae bacteriophage Nebulosus.	Doyle V, Giftos G, Kugler S, Melanson A, Needham D, Raber R, Solomon J, Webster A, Neely M, Molloy S.	Microbiol Resour Announc	10.1128/mra.00699-23	2023
	Biotransformation of 3-cyanopyridine to nicotinic acid using whole-cell nitrilase of Gordonia terrae mutant MN12.	Monika, Sheetal, Thakur N, Chand Bhalla T.	Bioprocess Biosyst Eng	10.1007/s00449-022-02823-8	2023
	Genome Sequence of Gordonia terrae Phage APunk.	Anderman E, Dini T, Eldbah K, Frino T, Milavec J, Sayed A, Profrock V, Virtue R, Qyshkollari T, Harrison M.	Microbiol Resour Announc	10.1128/mra.01220-22	2023
	Isolation and identification of the alga-symbiotic bacterium Gordonia and characterisation of its exopolysaccharide.	Liu W, Xing X, Dong Q, Liu X, Li W.	Nat Prod Res	10.1080/14786419.2022.2123477	2024
	Prophage Activation: An In Silico Platform for Identifying Prophage Regulatory Elements to Inform Phage Engineering Against Drug-Resistant Bacteria.	Musrrat S, Han Z, Wang K, Huang Y, Xiang Y, Liu S, Yin W.	Life (Basel)	10.3390/life15091417	2025
	Complete Genome Sequences of Chop, DelRio, and GrandSlam, Three Gordonia Phages Isolated from Soil in Central Arkansas.	Mathes HN, Christenson EI, Crum JH, Edmondson EM, Gray KE, Lawson LW, Lee LE, Lee MP, Lipscomb JA, Masengale ME, Matthews HG, McClain CM, Melton TN, Morrow TH, Perry AM, Rainwater DR, Renois GE, Rettig MF, Troup DC, Wilson AJ, Reyna NS, Plymale R.	Microbiol Resour Announc	10.1128/mra.00023-23	2023
Pathogenicity	Annotation of Secretariat and Hydrus, two DJ cluster phages isolated on Gordonia rubripertincta.	Bland J, Miller S, Algarin-Martinez ED, Biggs AM, Cavasini MED, Chase MA, Coleman C, Correa V, Danielson DF, Dean WR, French JL, Horne ME, Macumber BM, Martini FK, Mazzei SG, McGarrah CEE, Odegaard O, Parameswaran IS, Quarterman C, Rand TM, Ruiz-Houston KM, Sciacchitano AR, Seidensticker NS, Soltys A, Terron-Osorio AE, Todd AL, Wood AR, Ungrey MD, Pollenz RS.	Microbiol Resour Announc	10.1128/mra.00623-23	2023
	Genome Sequence of a Cluster CR2 Gordonia terrae Phage, StarStruck.	Cannell W, Carrolton E, Coombs J, Gambol A, Martin M, Neely M, Molloy S.	Microbiol Resour Announc	10.1128/mra.00694-22	2022
	Genome Sequence of Singleton Gordonia terrae Bacteriophage Finkle.	Ashby S, Bressette G, Brown S, Charles S, Maginnis M, Molloy SD, Neely MN.	Microbiol Resour Announc	10.1128/mra.00693-22	2022
	Genomic Characterization of the Cluster CZ4 Gordonia terrae Phage Oregano.	Lembree H, Goktug O, Royal D, Russell A, Savage A, Sisco M, Waltner M, Chun V, Neely MN, Molloy SD.	Microbiol Resour Announc	10.1128/mra.00679-22	2022
	Genome Sequence of a Cluster DN1 Gordonia terrae Phage, Periwinkle.	Boudreaux EM, Childs SB, Dichiara A, Hardy A, Kovacs S, Kueck AF, Landesbergen PM, Neely M, Molloy S.	Microbiol Resour Announc	10.1128/mra.00696-22	2022
	Genome Sequences of Gordonia Phages GrootJr and NovumRegina.	Doyle EL, Elliott GM, Hummel SJ, Jindra KA, Marsh AT, Bowder DM.	Microbiol Resour Announc	10.1128/mra.00703-22	2022
	Genome Characterization of Gordonia Phage Amore2.	Lantis CM, Mattison EC, Miller SE, Williams AJ, Kanak AE.	Microbiol Resour Announc	10.1128/mra.00537-22	2022
	Genome Sequence of the Cluster CD Gordonia Phage Widow.	Curtis B, Ganbaatar B, Lawrence G, Oglesby W, Rice J, Tremblay E, Maginnis M, Molloy SD, Neely MN.	Microbiol Resour Announc	10.1128/mra.00695-22	2022
	Complete Genome Sequences of Actinobacteriophages Anaysia and Caviar.	Abidin ZU, Aucapina JE, Beauzil S, Berotte CM, Bonsu AO, Burgos GY, Chak STC, Collymore A, Daley ER, Defarias R, Ghobrial V, Gill SS, Huertas-Arias JM, Joseph H, Kaur N, Khan U, Klein CJ, Lazo H, Li Y, Miller OB, Munoz JJ, Nieto-Fernandez FE, Nisbett LM, Owens D, Patel SM, Paulino EJ, Pender S, Perkins SM, Persaud A, Pierrot T, Raja I, Riley KL, Romero S, Sarmiento PG, Shorter K, Smith S, Tahir W, Ukekwe CA.	Microbiol Resour Announc	10.1128/mra.00944-22	2022
	Complete Genome Sequences of Microbacterium Phages Clayda5 and Gshelby23 and Gordonia Phages Wrigley and Santhid.	Bastian AM, Blankespoor MJ, Fynaardt GK, Gilmeister SA, Hurley EE, Jones M, McKenney EJ, Olguin AN, Rens MN, Snyder G, Sterk AE, Swart SM, Trevino A, Van Egdom AN, Veach MC, Cullinan K, Van Berkum K, Pavich LR, Starr K, Noordewier B, Tolsma SS.	Microbiol Resour Announc	10.1128/mra.00789-22	2022
Biotechnology	Actinomycete-Derived Pigments: A Path Toward Sustainable Industrial Colorants.	Diez BH, Torres CAV, Gaudencio SP.	Mar Drugs	10.3390/md23010039	2025
	Case report: Mycetoma caused by Gordonia soli.	Franca JCB, Carneiro BH, Cognialli RCR, Queiroz-Telles F, Queiroz-Telles F.	Rev Soc Bras Med Trop	10.1590/0037-8682-0326-2023	2023
Metabolism	Exploring the fermentation characteristics of a newly isolated marine bacteria strain, Gordonia terrae TWRH01 for carotenoids production.	Loh WLC, Huang KC, Ng HS, Lan JC.	J Biosci Bioeng	10.1016/j.jbiosc.2020.03.007	2020
	Focusing on Gordonia Infections: Distribution, Antimicrobial Susceptibilities and Phylogeny.	Pino-Rosa S, Medina-Pascual MJ, Carrasco G, Garrido N, Villalon P, Valiente M, Valdezate S.	Antibiotics (Basel)	10.3390/antibiotics12111568	2023
	An improved process for synthesis of nicotinic acid using hyper induced whole cell nitrilase of Gordonia terrae MTCC8139.	Monika, Sheetal, Thakur N, Bhalla TC.	3 Biotech	10.1007/s13205-022-03381-2	2022
Enzymology	Bioremediation of di-(2-ethylhexyl) phthalate contaminated red soil by Gordonia terrae RL-JC02: Characterization, metabolic pathway and kinetics.	Zhang H, Lin Z, Liu B, Wang G, Weng L, Zhou J, Hu H, He H, Huang Y, Chen J, Ruth N, Li C, Ren L.	Sci Total Environ	10.1016/j.scitotenv.2020.139138	2020
	Genome Sequence of VanLee, a Singleton Actinobacteriophage That Infects Multiple Gordonia Strains.	Franco V, Barnhill K, Biggs A, Bland J, Choudhary H, Crogan T, Finocchiaro A, Fuller T, Hanwacker C, Howard Z, Iqbal M, Mathew A, Miller S, Padhye S, Rainey E, Rodriguez A, Stewart E, Chase M, Otero L, Pollenz RS.	Microbiol Resour Announc	10.1128/mra.00519-21	2021
	Genome Sequences of 20 Bacteriophages Isolated on Gordonia terrae.	Pope WH, Butela KA, Garlena RA, Jacobs-Sera D, Russell DA, Warner MH, University of Pittsburgh SEA-PHAGES, Hatfull GF.	Microbiol Resour Announc	10.1128/mra.01489-19	2020
	Genome Sequences of Gordonia Bacteriophages Jodelie19, BlingBling, and Burnsey.	Harrington DL, Barten HR, Audannio EI, Bragg FA, Garcia KA, Niswonger KM, MacAllister JR, McCarroll AM, O'Sullivan DM, Torres SE, Stanley CD, Yalzadeh D, Kimberley KW, McKenna CC, Theoret JR, Yoon EJ, Windsor EJ.	Microbiol Resour Announc	10.1128/mra.01280-20	2021
	Gordonia bronchialis Bacteremia in a Patient With Burkitt Lymphoma: A Case Report and Literature Review.	McCormick BJ, Chirila RM.	Cureus	10.7759/cureus.30644	2022
Genetics	Genomic analysis provides insights into the Gordonia sp. W3S5 taxonomy and sulfur metabolism-related genes.	Parveen S, Akhtar N, Akram J.	3 Biotech	10.1007/s13205-021-02850-4	2021
Enzymology	Mycetoma in China: A Case Report and Review of the Literature.	Wang R, Yao X, Li R.	Mycopathologia	10.1007/s11046-019-00324-z	2019
	Antifungal activity of compounds from Gordonia sp. WA8-44 isolated from the gut of Periplaneta americana and molecular docking studies.	Liu W, Li E, Liu L, Tian F, Luo X, Cai Y, Wang J, Jin X.	Heliyon	10.1016/j.heliyon.2023.e17777	2023
Metabolism	Deciphering synergistic characteristics of redox mediators-stimulated echinenone production of Gordonia terrae TWIH01.	Xu B, Chen BY, Huang KC, Sun QJ, Chi-Wei Lan J.	J Biosci Bioeng	10.1016/j.jbiosc.2018.03.019	2018
	Exploration of carotenoid-producing Rhodotorula yeasts from amazonian substrates for sustainable biotechnology applications.	Fonseca RSK, Lotas KM, Cortez ACA, Fernandes FDS, de Souza ES, Dufosse L, de Souza JVB.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100373	2025
Genetics	Microbiota of long-term indwelling hemodialysis catheters during renal transplantation perioperative period: a cross-sectional metagenomic microbial community analysis.	Yan Z, Wang Y, Zeng W, Xia R, Liu Y, Wu Z, Deng W, Zhu M, Xu J, Deng H, Miao Y.	Ren Fail	10.1080/0886022x.2023.2256421	2023
	Madura foot caused by Gordonia terrae misdiagnosed as Nocardia.	Zampella JG, Kwatra SG, Kazi N, Aguh C.	Australas J Dermatol	10.1111/ajd.12516	2017
	Antimicrobial treatment in invasive infections caused by Gordonia bronchialis: systematic review.	Zivkovic Zaric R, Canovic P, Zaric M, Vuleta M, Vuleta Nedic K, Jovanovic J, Zornic N, Nesic J, Spasic M, Jakovljevic S, Ilic M, Jovanovic D, Todorovic Z, Arsenijevic P, Sovrlic M, Milovanovic J.	Front Med (Lausanne)	10.3389/fmed.2024.1333663	2024
	Antimicrobial compounds were isolated from the secondary metabolites of Gordonia, a resident of intestinal tract of Periplaneta americana.	Ma Y, Xu M, Liu H, Yu T, Guo P, Liu W, Jin X.	AMB Express	10.1186/s13568-021-01272-y	2021
Enzymology	Synthesis of vanillic acid using whole cell nitrilase of wild and mutant Gordonia terrae.	Bhalla TC, Prashant, Kumari N, Kumar V, Kumar V, Savitri.	Bioprocess Biosyst Eng	10.1007/s00449-015-1490-8	2016
Metabolism	Bench scale synthesis of p-hydroxybenzoic acid using whole-cell nitrilase of Gordonia terrae mutant E9.	Kumar V, Kumar V, Thakur N, Bhalla TC.	Bioprocess Biosyst Eng	10.1007/s00449-015-1367-x	2015
Metabolism	Synergistic co-metabolism enhancing the crude oil degradation by Acinetobacter oleivorans DR1 and its metabolic potential.	Singha LP, Kumari R, Singha KM, Pandey P, Shukla P.	Microbiol Spectr	10.1128/spectrum.03023-24	2025
	Genome Sequences of Gordonia terrae Phages Benczkowski14 and Katyusha.	Pope WH, Benczkowski MS, Green DE, Hwang M, Kennedy B, Kocak B, Kruczek E, Lin L, Moretti ML, Onelangsy FL, Mezghani N, Milliken KA, Toner CL, Thompson PK, Ulbrich MC, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00578-16	2016
Enzymology	Purification, characterization and in-silico analysis of nitrilase from Gordonia terrae.	Kumar V, Seth A, Kumari V, Kumar V, Bhalla TC.	Protein Pept Lett	10.2174/0929866521666140909154537	2015
Phylogeny	Gordonia terrae kidney graft abscess in a renal transplant patient.	Nicodemo AC, Odongo FC, Doi AM, Sampaio JL.	Transpl Infect Dis	10.1111/tid.12252	2014
Enzymology	A Chinese patient with peritoneal dialysis-related peritonitis caused by Gordonia terrae: a case report.	Hou C, Yang Y, Li Z.	BMC Infect Dis	10.1186/s12879-017-2283-2	2017
	Genome Sequence of Gordonia Phage Emalyn.	Pope WH, Guido MJ, Iyengar P, Nigra JT, Serbin MB, Kasturiarachi NS, Pressimone CA, Schiebel JG, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00597-16	2016
	Genome Sequences of Gordonia terrae Bacteriophages Phinally and Vivi2.	Pope WH, Anderson KC, Arora C, Bortz ME, Burnet G, Conover DH, D'Incau GM, Ghobrial JA, Jonas AL, Migdal EJ, Rote NL, German BA, McDonnell JE, Mezghani N, Schafer CE, Thompson PK, Ulbrich MC, Yu VJ, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00599-16	2016
	Genome Sequences of Gordonia terrae Phages Attis and SoilAssassin.	Pope WH, Biery DN, Huff ZT, Huynh AB, McFadden WM, Mouat JS, Schneiderman SE, Song H, Szpak LE, Umbaugh MS, German BA, McDonnell JE, Mezghani N, Schafer CE, Thompson PK, Ulbrich MC, Yu VJ, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00591-16	2016
	Gordonia sputi related multiple brain abscesses, an AIDS-presenting illness: Thinking outside the box.	Eribi A, Al-Amri K, Al-Jabri A, Osman A, Mohamed Elfadil O.	IDCases	10.1016/j.idcr.2020.e00906	2020
	Analyses of single-cell RNA sequencing uncover the role of intratumoral Helicobacter pylori in shaping tumor progression and immunity in gastric cancer.	Xu J, Yang J, Sun Q, Chang J, Wang F.	Cancer Immunol Immunother	10.1007/s00262-025-04048-6	2025
	Isolation and characterization of 2-butoxyethanol degrading bacterial strains.	Woiski C, Dobslaw D, Engesser KH.	Biodegradation	10.1007/s10532-020-09900-3	2020
	Genome Sequence of Gordonia Phage BetterKatz.	Pope WH, Berryman EN, Forrest KM, McHale L, Wertz AT, Zhuang Z, Kasturiarachi NS, Pressimone CA, Schiebel JG, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00590-16	2016
	Genome Sequences of Gordonia Phages Bowser and Schwabeltier.	Montgomery MT, Pope WH, Arnold ZM, Basina A, Iyer AM, Stoner TH, Kasturiarachi NS, Pressimone CA, Schiebel JG, Furbee EC, Grubb SR, Warner MH, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00596-16	2016
	Genome Sequences of Gordonia Phages Hotorobo, Woes, and Monty.	Pope WH, Davis JP, O'Shea S, Pfeiffer AC, Rich AN, Xue JC, Shedlock KA, Stanton AC, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00598-16	2016
	Genome Sequence of Gordonia Phage Yvonnetastic.	Pope WH, Bandyopadhyay A, Carlton ML, Kane MT, Panchal NJ, Pham YC, Reynolds ZJ, Sapienza MS, German BA, McDonnell JE, Schafer CE, Yu VJ, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00594-16	2016
	Genome Sequence of Gordonia Bacteriophage Lucky10.	Pope WH, Brown AK, Fisher DJ, Okwiya NH, Savage KA, German BA, McDonnell JE, Schafer CE, Yu VJ, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00580-16	2016
	Genome Sequences of Gordonia Phages BaxterFox, Kita, Nymphadora, and Yeezy.	Pope WH, Bandla S, Colbert AK, Eichinger FG, Gamburg MB, Horiates SG, Jamison JM, Julian DR, Moore WA, Murthy P, Powell MC, Smith SV, Mezghani N, Milliken KA, Thompson PK, Toner CL, Ulbrich MC, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00600-16	2016
	Genome Sequences of Gordonia Bacteriophages Obliviate, UmaThurman, and Guacamole.	Pope WH, Akbar AF, Ayers TN, Belohoubek SG, Chung CF, Hartman AC, Kayiti T, Kessler CM, Koman PI, Kotovskiy GA, Morgan TM, Rohac RM, Silva GM, Willis CE, Milliken KA, Shedlock KA, Stanton AC, Toner CL, Furbee EC, Grubb SR, Warner MH, Montgomery MT, Garlena RA, Russell DA, Jacobs-Sera D, Hatfull GF.	Genome Announc	10.1128/genomea.00595-16	2016
	Characterization and Bioactive Potential of Carotenoid Lutein from Gordonia rubripertncta GH-1 Isolated from Traditional Pixian Douban.	Zhang Q, Zhang Q, Wang J, Li C, Zheng M, He Z, Zou Y, Xiong H, Xu B, Xiang W, Tang J.	Foods	10.3390/foods11223649	2022
Metabolism	Response of Rhodococcus cerastii IEGM 1278 to toxic effects of ibuprofen.	Ivshina IB, Tyumina EA, Bazhutin GA, Vikhareva EV.	PLoS One	10.1371/journal.pone.0260032	2021
Pathogenicity	Yet More Evidence of Collusion: a New Viral Defense System Encoded by Gordonia Phage CarolAnn.	Montgomery MT, Guerrero Bustamante CA, Dedrick RM, Jacobs-Sera D, Hatfull GF.	mBio	10.1128/mbio.02417-18	2019
	Photoprotection-related properties of a raw extract from Gordonia hongkongensis EUFUS-Z928: A culturable rare actinomycete associated with the Caribbean octocoral Eunicea fusca.	Sanchez-Suarez J, Villamil L, Coy-Barrera E, Diaz L.	Sci Prog	10.1177/00368504241272454	2024
	Enantioselective sulfoxidation using Streptomyces glaucescens GLA.0.	Salama S, Dishisha T, Habib MH, Abdelazem AZ, Bakeer W, Abdel-Latif M, Gaber Y.	RSC Adv	10.1039/d0ra05838f	2020
Phylogeny	Molecular Identification of Mycobacterium Species of Public Health Importance in Cattle in Zimbabwe by 16S rRNA Gene Sequencing.	Padya L, Chin'ombe N, Magwenzi M, Mbanga J, Ruhanya V, Nziramasanga P.	Open Microbiol J	10.2174/1874285801509010038	2015
	Insights into the phylogenetic diversity, biological activities, and biosynthetic potential of mangrove rhizosphere Actinobacteria from Hainan Island.	Ye JJ, Zou RJ, Zhou DD, Deng XL, Wu NL, Chen DD, Xu J.	Front Microbiol	10.3389/fmicb.2023.1157601	2023
	Bioactivities and Extract Dereplication of Actinomycetales Isolated From Marine Sponges.	Santos JD, Vitorino I, De la Cruz M, Diaz C, Cautain B, Annang F, Perez-Moreno G, Gonzalez Martinez I, Tormo JR, Martin JM, Urbatzka R, Vicente FM, Lage OM.	Front Microbiol	10.3389/fmicb.2019.00727	2019
	Systematic Review of Actinomycetes in the Baijiu Fermentation Microbiome.	Chen C, Yang H, Liu J, Luo H, Zou W.	Foods	10.3390/foods11223551	2022
	Isolation and chemical characterization of the biosurfactant produced by Gordonia sp. IITR100.	Zargar AN, Mishra S, Kumar M, Srivastava P.	PLoS One	10.1371/journal.pone.0264202	2022
Phylogeny	Phylogenetic diversity and activity screening of cultivable Actinobacteria isolated from marine sponges and associated environments from the western coast of India.	Baig U, Dahanukar N, Shintre N, Holkar K, Pund A, Lele U, Gujarathi T, Patel K, Jakati A, Singh R, Vidwans H, Tamhane V, Deshpande N, Watve M.	Access Microbiol	10.1099/acmi.0.000242	2021
Metabolism	Carotenoids in a Corynebacterineae, Gordonia terrae AIST-1: carotenoid glucosyl mycoloyl esters.	Takaichi S, Maoka T, Akimoto N, Carmona ML, Yamaoka Y.	Biosci Biotechnol Biochem	10.1271/bbb.80299	2008
	Specialized Metabolism of Gordonia Genus: An Integrated Survey on Chemodiversity Combined with a Comparative Genomics-Based Analysis.	Sanchez-Suarez J, Diaz L, Coy-Barrera E, Villamil L.	BioTech (Basel)	10.3390/biotech11040053	2022
Genetics	Identification and classification of the genomes of novel microviruses in poultry slaughterhouse.	Xie K, Lin B, Sun X, Zhu P, Liu C, Liu G, Cao X, Pan J, Qiu S, Yuan X, Liang M, Jiang J, Yuan L.	Front Microbiol	10.3389/fmicb.2024.1393153	2024
Enzymology	Isolation of Gordonia terrae from a patient with catheter-related bacteraemia.	Grisold AJ, Roll P, Hoenigl M, Feierl G, Vicenzi-Moser R, Marth E.	J Med Microbiol	10.1099/jmm.0.47388-0	2007
Genetics	PB-LKS: a python package for predicting phage-bacteria interaction through local K-mer strategy.	Qiu J, Nie W, Ding H, Dai J, Wei Y, Li D, Zhang Y, Xie J, Tian X, Wu N, Qiu T.	Brief Bioinform	10.1093/bib/bbae010	2024
	Rapid quantification and analysis of genetic diversity among Gordonia populations in foaming activated sludge plants.	Marrengane Z, Kumar SK, Pillay L, Bux F.	J Basic Microbiol	10.1002/jobm.201000213	2011
	Gordonia species as a rare pathogen isolated from milk of dairy cows with mastitis.	Bzdil J, Slosarkova S, Fleischer P, Matiasovic J.	Sci Rep	10.1038/s41598-022-09340-4	2022
Phylogeny	Utility of 16S rDNA Sequencing for Identification of Rare Pathogenic Bacteria.	Loong SK, Khor CS, Jafar FL, AbuBakar S.	J Clin Lab Anal	10.1002/jcla.21980	2016
Enzymology	Infections caused by Gordonia species at a medical centre in Taiwan, 1997 to 2008.	Lai CC, Wang CY, Liu CY, Tan CK, Lin SH, Liao CH, Chou CH, Huang YT, Lin HI, Hsueh PR.	Clin Microbiol Infect	10.1111/j.1469-0691.2009.03085.x	2010
	Protein-Mediated and RNA-Based Origins of Replication of Extrachromosomal Mycobacterial Prophages.	Wetzel KS, Aull HG, Zack KM, Garlena RA, Hatfull GF.	mBio	10.1128/mbio.00385-20	2020
Phylogeny	Role of Williamsia and Segniliparus in human infections with the approach taxonomy, cultivation, and identification methods.	Fatahi-Bafghi M.	Ann Clin Microbiol Antimicrob	10.1186/s12941-021-00416-z	2021
	Systematic investigation of the emerging pathogen of Tsukamurella species in a Chinese tertiary teaching hospital.	Yu S, Ding X, Hua K, Zhu H, Zhang Q, Song X, Xie X, Huang R, Xu Y, Zhang L, Yi Q, Zhao Y.	Microbiol Spectr	10.1128/spectrum.01644-23	2023
	Bacteriophage tRNA-dependent lysogeny: requirement of phage-encoded tRNA genes for establishment of lysogeny.	Guerrero-Bustamante CA, Hatfull GF.	mBio	10.1128/mbio.03260-23	2024
	Corynebacterium parakroppenstedtii secretes a novel glycolipid to promote the development of granulomatous lobular mastitis.	Liu R, Luo Z, Dai C, Wei Y, Yan S, Kuang X, Qi K, Fu A, Li Y, Fu S, Ma Z, Dai W, Xiao X, Wu Q, Zhou H, Rao Y, Yuan J, Shi T, Deng Z, Chen C, Liu T.	Signal Transduct Target Ther	10.1038/s41392-024-01984-0	2024
	[Effect of bacterial satellites on Chlamydomonas reinhardtii growth in an algo-bacterial community].	Nikolaev IuA, Plakunov VK, Voronina NA, Nemtseva NV, Plotnikov AO, Gogoleva OA, Murav'eva ME, Ovechkina GV.	Mikrobiologiia	10.1134/s0026261708010116	2008
	Bacteremia due to Gordonia polyisoprenivorans: case report and review of literature.	Ding X, Yu Y, Chen M, Wang C, Kang Y, Li H, Lou J.	BMC Infect Dis	10.1186/s12879-017-2523-5	2017
Enzymology	Mycobacterium fortuitum breast abscess after nipple piercing.	Abbass K, Adnan MK, Markert RJ, Emig M, Khan NA.	Can Fam Physician		2014
Enzymology	Catheter-related bacteremia caused by the nocardioform actinomycete Gordonia terrae.	Pham AS, De I, Rolston KV, Tarrand JJ, Han XY.	Clin Infect Dis	10.1086/367543	2003
Phylogeny	Etiological misidentification by routine biochemical tests of bacteremia caused by Gordonia terrae infection in the course of an episode of acute cholecystitis.	Gil-Sande E, Brun-Otero M, Campo-Cerecedo F, Esteban E, Aguilar L, Garcia-de-Lomas J.	J Clin Microbiol	10.1128/jcm.00444-06	2006
Metabolism	Biodegradation of ethyl t-butyl ether (ETBE), methyl t-butyl ether (MTBE) and t-amyl methyl ether (TAME) by Gordonia terrae.	Hernandez-Perez G, Fayolle F, Vandecasteele JP.	Appl Microbiol Biotechnol	10.1007/s002530000482	2001
	Complete conversion of all typical glycosylated protopanaxatriol ginsenosides to aglycon protopanaxatriol by combined bacterial beta-glycosidases.	Yang EJ, Kim TH, Shin KC, Oh DK.	AMB Express	10.1186/s13568-018-0543-1	2018
Genetics	Characterization of the genome of the polyvalent lytic bacteriophage GTE2, which has potential for biocontrol of Gordonia-, Rhodococcus-, and Nocardia-stabilized foams in activated sludge plants.	Petrovski S, Seviour RJ, Tillett D.	Appl Environ Microbiol	10.1128/aem.00025-11	2011
Genetics	Tales of diversity: Genomic and morphological characteristics of forty-six Arthrobacter phages.	Klyczek KK, Bonilla JA, Jacobs-Sera D, Adair TL, Afram P, Allen KG, Archambault ML, Aziz RM, Bagnasco FG, Ball SL, Barrett NA, Benjamin RC, Blasi CJ, Borst K, Braun MA, Broomell H, Brown CB, Brynell ZS, Bue AB, Burke SO, Casazza W, Cautela JA, Chen K, Chimalakonda NS, Chudoff D, Connor JA, Cross TS, Curtis KN, Dahlke JA, Deaton BM, Degroote SJ, DeNigris DM, DeRuff KC, Dolan M, Dunbar D, Egan MS, Evans DR, Fahnestock AK, Farooq A, Finn G, Fratus CR, Gaffney BL, Garlena RA, Garrigan KE, Gibbon BC, Goedde MA, Guerrero Bustamante CA, Harrison M, Hartwell MC, Heckman EL, Huang J, Hughes LE, Hyduchak KM, Jacob AE, Kaku M, Karstens AW, Kenna MA, Khetarpal S, King RA, Kobokovich AL, Kolev H, Konde SA, Kriese E, Lamey ME, Lantz CN, Lapin JS, Lawson TO, Lee IY, Lee SM, Lee-Soety JY, Lehmann EM, London SC, Lopez AJ, Lynch KC, Mageeney CM, Martynyuk T, Mathew KJ, Mavrich TN, McDaniel CM, McDonald H, McManus CJ, Medrano JE, Mele FE, Menninger JE, Miller SN, Minick JE, Nabua CT, Napoli CK, Nkangabwa M, Oates EA, Ott CT, Pellerino SK, Pinamont WJ, Pirnie RT, Pizzorno MC, Plautz EJ, Pope WH, Pruett KM, Rickstrew G, Rimple PA, Rinehart CA, Robinson KM, Rose VA, Russell DA, Schick AM, Schlossman J, Schneider VM, Sells CA, Sieker JW, Silva MP, Silvi MM, Simon SE, Staples AK, Steed IL, Stowe EL, Stueven NA, Swartz PT, Sweet EA, Sweetman AT, Tender C, Terry K, Thomas C, Thomas DS, Thompson AR, Vanderveen L, Varma R, Vaught HL, Vo QD, Vonberg ZT, Ware VC, Warrad YM, Wathen KE, Weinstein JL, Wyper JF, Yankauskas JR, Zhang C, Hatfull GF.	PLoS One	10.1371/journal.pone.0180517	2017
	Isolation and characterization of bacteriophages infecting nocardioforms in wastewater treatment plant.	Khairnar K, Pal P, Chandekar RH, Paunikar WN.	Biotechnol Res Int	10.1155/2014/151952	2014
	Metagenomic Shotgun Sequencing of Endocervical, Vaginal, and Rectal Samples among Fijian Women with and without Chlamydia trachomatis Reveals Disparate Microbial Populations and Function across Anatomic Sites: a Pilot Study.	Bommana S, Richards G, Kama M, Kodimerla R, Jijakli K, Read TD, Dean D.	Microbiol Spectr	10.1128/spectrum.00105-22	2022
	Genome sequences and characterization of the related Gordonia phages GTE5 and GRU1 and their use as potential biocontrol agents.	Petrovski S, Tillett D, Seviour RJ.	Appl Environ Microbiol	10.1128/aem.05584-11	2012
Genetics	Lysis to Kill: Evaluation of the Lytic Abilities, and Genomics of Nine Bacteriophages Infective for Gordonia spp. and Their Potential Use in Activated Sludge Foam Biocontrol.	Dyson ZA, Tucci J, Seviour RJ, Petrovski S.	PLoS One	10.1371/journal.pone.0134512	2015
Enzymology	A polymicrobial outbreak of surgical site infections following cardiac surgery at a community hospital in Florida, 2011-2012.	Nguyen DB, Gupta N, Abou-Daoud A, Klekamp BG, Rhone C, Winston T, Hedberg T, Scuteri A, Evans C, Jensen B, Moulton-Meissner H, Torok T, Berrios-Torres SI, Noble-Wang J, Kallen A.	Am J Infect Control	10.1016/j.ajic.2013.11.021	2014
	Antimicrobial Potential of Bacteria Associated with Marine Sea Slugs from North Sulawesi, Indonesia.	Bohringer N, Fisch KM, Schillo D, Bara R, Hertzer C, Grein F, Eisenbarth JH, Kaligis F, Schneider T, Wagele H, Konig GM, Schaberle TF.	Front Microbiol	10.3389/fmicb.2017.01092	2017
	Bacteriophages of Gordonia spp. Display a Spectrum of Diversity and Genetic Relationships.	Pope WH, Mavrich TN, Garlena RA, Guerrero-Bustamante CA, Jacobs-Sera D, Montgomery MT, Russell DA, Warner MH, Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science (SEA-PHAGES), Hatfull GF.	mBio	10.1128/mbio.01069-17	2017
	Bacteria emitted in ambient air during bronchoscopy-a risk to health care workers?	Marchand G, Duchaine C, Lavoie J, Veillette M, Cloutier Y.	Am J Infect Control	10.1016/j.ajic.2016.04.241	2016
Enzymology	Characterization of the microbiota in the guts of Triatoma brasiliensis and Triatoma pseudomaculata infected by Trypanosoma cruzi in natural conditions using culture independent methods.	Gumiel M, da Mota FF, Rizzo Vde S, Sarquis O, de Castro DP, Lima MM, Garcia Ede S, Carels N, Azambuja P.	Parasit Vectors	10.1186/s13071-015-0836-z	2015
	Biofiltration of Chloroform in a Trickle Bed Air Biofilter Under Acidic Conditions.	Palanisamy K, Mezgebe B, Sorial GA, Sahle-Demessie E.	Water Air Soil Pollut	10.1007/s11270-016-3194-3	2016
	Endocervical and vaginal microbiota in South African adolescents with asymptomatic Chlamydia trachomatis infection.	Balle C, Lennard K, Dabee S, Barnabas SL, Jaumdally SZ, Gasper MA, Maseko V, Mbulawa ZZA, Williamson AL, Bekker LG, Lewis DA, Passmore JS, Jaspan HB.	Sci Rep	10.1038/s41598-018-29320-x	2018
Enzymology	Gordonia bacteremia.	Ramanan P, Deziel PJ, Wengenack NL.	J Clin Microbiol	10.1128/jcm.01449-13	2013
	Five cases of bacteraemia due to Gordonia species.	Brust JCM, Whittier S, Scully BE, McGregor CC, Yin MT.	J Med Microbiol	10.1099/jmm.0.010272-0	2009
	Bacteria have numerous distinctive groups of phage-plasmids with conserved phage and variable plasmid gene repertoires.	Pfeifer E, Moura de Sousa JA, Touchon M, Rocha EPC.	Nucleic Acids Res	10.1093/nar/gkab064	2021
Genetics	Characterization of the public transit air microbiome and resistome reveals geographical specificity.	Leung MHY, Tong X, Boifot KO, Bezdan D, Butler DJ, Danko DC, Gohli J, Green DC, Hernandez MT, Kelly FJ, Levy S, Mason-Buck G, Nieto-Caballero M, Syndercombe-Court D, Udekwu K, Young BG, Mason CE, Dybwad M, Lee PKH.	Microbiome	10.1186/s40168-021-01044-7	2021
Enzymology	Gordonia bronchialis bacteremia and pleural infection: case report and review of the literature.	Johnson JA, Onderdonk AB, Cosimi LA, Yawetz S, Lasker BA, Bolcen SJ, Brown JM, Marty FM.	J Clin Microbiol	10.1128/jcm.02121-10	2011
Pathogenicity	More Evidence of Collusion: a New Prophage-Mediated Viral Defense System Encoded by Mycobacteriophage Sbash.	Gentile GM, Wetzel KS, Dedrick RM, Montgomery MT, Garlena RA, Jacobs-Sera D, Hatfull GF.	mBio	10.1128/mbio.00196-19	2019
	Global burden of human mycetoma: a systematic review and meta-analysis.	van de Sande WW.	PLoS Negl Trop Dis	10.1371/journal.pntd.0002550	2013
	Evaluation of microorganisms cultured from injured and repressed tissue regeneration sites in endangered giant aquatic Ozark Hellbender salamanders.	Nickerson CA, Ott CM, Castro SL, Garcia VM, Molina TC, Briggler JT, Pitt AL, Tavano JJ, Byram JK, Barrila J, Nickerson MA.	PLoS One	10.1371/journal.pone.0028906	2011
Genetics	Weirdo19ES is a novel singleton mycobacteriophage that selects for glycolipid deficient phage-resistant M. smegmatis mutants.	Suarez CA, Franceschelli JJ, Tasselli SE, Morbidoni HR.	PLoS One	10.1371/journal.pone.0231881	2020
	Reviewing a plethora of oxidative-type reactions catalyzed by whole cells of Streptomyces species.	Salama S, Habib MH, Hatti-Kaul R, Gaber Y.	RSC Adv	10.1039/d1ra08816e	2022
Genetics	A novel inducible prophage from the mycosphere inhabitant Paraburkholderia terrae BS437.	Pratama AA, van Elsas JD.	Sci Rep	10.1038/s41598-017-09317-8	2017
Enzymology	Evaluation of the Bruker MALDI Biotyper for identification of Gram-positive rods: development of a diagnostic algorithm for the clinical laboratory.	Schulthess B, Bloemberg GV, Zbinden R, Bottger EC, Hombach M.	J Clin Microbiol	10.1128/jcm.02399-13	2014
Metabolism	Mineralization of the cyclic nitramine explosive hexahydro-1,3,5-trinitro-1,3,5-triazine by Gordonia and Williamsia spp.	Thompson KT, Crocker FH, Fredrickson HL.	Appl Environ Microbiol	10.1128/aem.71.12.8265-8272.2005	2005
	Function, expression, specificity, diversity and incompatibility of actinobacteriophage parABS systems.	Dedrick RM, Mavrich TN, Ng WL, Cervantes Reyes JC, Olm MR, Rush RE, Jacobs-Sera D, Russell DA, Hatfull GF.	Mol Microbiol	10.1111/mmi.13414	2016
	Biogenic hydrogen and methane production from Chlorella vulgaris and Dunaliella tertiolecta biomass.	Lakaniemi AM, Hulatt CJ, Thomas DN, Tuovinen OH, Puhakka JA.	Biotechnol Biofuels	10.1186/1754-6834-4-34	2011
Enzymology	Novel diagnostic algorithm for identification of mycobacteria using genus-specific amplification of the 16S-23S rRNA gene spacer and restriction endonucleases.	Roth A, Reischl U, Streubel A, Naumann L, Kroppenstedt RM, Habicht M, Fischer M, Mauch H.	J Clin Microbiol	10.1128/jcm.38.3.1094-1104.2000	2000
	Molecular analysis of shower curtain biofilm microbes.	Kelley ST, Theisen U, Angenent LT, St Amand A, Pace NR.	Appl Environ Microbiol	10.1128/aem.70.7.4187-4192.2004	2004
Metabolism	Interaction of operational and physicochemical factors leading to Gordonia amarae-like foaming in an incompletely nitrifying activated sludge plant.	Asvapathanagul P, Huang Z, Gedalanga PB, Baylor A, Olson BH.	Appl Environ Microbiol	10.1128/aem.00404-12	2012
	Preparing for the crewed Mars journey: microbiota dynamics in the confined Mars500 habitat during simulated Mars flight and landing.	Schwendner P, Mahnert A, Koskinen K, Moissl-Eichinger C, Barczyk S, Wirth R, Berg G, Rettberg P.	Microbiome	10.1186/s40168-017-0345-8	2017
	Identification of Rhodococcus equi lipids recognized by host cytotoxic T lymphocytes.	Harris SP, Fujiwara N, Mealey RH, Alperin DC, Naka T, Goda R, Hines SA.	Microbiology (Reading)	10.1099/mic.0.035915-0	2010
Metabolism	A peptidoglycan hydrolase motif within the mycobacteriophage TM4 tape measure protein promotes efficient infection of stationary phase cells.	Piuri M, Hatfull GF.	Mol Microbiol	10.1111/j.1365-2958.2006.05473.x	2006
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
	Microbial ingress and in vitro degradation enhanced by glucose on bioabsorbable Mg-Li-Ca alloy.	Li LY, Han ZZ, Zeng RC, Qi WC, Zhai XF, Yang Y, Lou YT, Gu T, Xu D, Duan JZ.	Bioact Mater	10.1016/j.bioactmat.2020.06.014	2020
	Associated bacteria of a pine sawyer beetle confer resistance to entomopathogenic fungi via fungal growth inhibition.	Deng J, Xu W, Lv G, Yuan H, Zhang QH, Wickham JD, Xu L, Zhang L.	Environ Microbiome	10.1186/s40793-022-00443-z	2022
Metabolism	Analysis of the xplAB-containing gene cluster involved in the bacterial degradation of the explosive hexahydro-1,3,5-trinitro-1,3,5-triazine.	Chong CS, Sabir DK, Lorenz A, Bontemps C, Andeer P, Stahl DA, Strand SE, Rylott EL, Bruce NC.	Appl Environ Microbiol	10.1128/aem.01818-14	2014
Metabolism	Characteristics of Inorganic Phosphate-Solubilizing Bacteria from the Sediments of a Eutrophic Lake.	Li Y, Zhang J, Zhang J, Xu W, Mou Z.	Int J Environ Res Public Health	10.3390/ijerph16122141	2019
Enzymology	Cloning, expression and characterization of a versatile Baeyer-Villiger monooxygenase from Dietzia sp. D5.	Bisagni S, Hatti-Kaul R, Mamo G.	AMB Express	10.1186/s13568-014-0023-1	2014
	In silico genome analysis reveals the metabolic versatility and biotechnology potential of a halotorelant phthalic acid esters degrading Gordonia alkanivorans strain YC-RL2.	Nahurira R, Wang J, Yan Y, Jia Y, Fan S, Khokhar I, Eltoukhy A.	AMB Express	10.1186/s13568-019-0733-5	2019
	Diverse alkane hydroxylase genes in microorganisms and environments.	Nie Y, Chi CQ, Fang H, Liang JL, Lu SL, Lai GL, Tang YQ, Wu XL.	Sci Rep	10.1038/srep04968	2014
Genetics	Complete Genome Sequences of 38 Gordonia sp. Bacteriophages.	Pope WH, Montgomery MT, Bonilla JA, Dejong R, Garlena RA, Guerrero Bustamante C, Klyczek KK, Russell DA, Wertz JT, Jacobs-Sera D, Hatfull GF	Genome Announc	10.1128/genomeA.01143-16	2017
Genetics	Complete Genome Sequence of Gordonia terrae 3612.	Russell DA, Guerrero Bustamante CA, Garlena RA, Hatfull GF	Genome Announc	10.1128/genomeA.01058-16	2016
Phylogeny	Gordonia humi sp. nov., isolated from soil.	Kampfer P, Young CC, Chu JN, Frischmann A, Busse HJ, Arun AB, Shen FT, Rekha PD.	Int J Syst Evol Microbiol	10.1099/ijs.0.020545-0	2011
Phylogeny	Tsukamurella strandjordae sp. nov., a proposed new species causing sepsis.	Kattar MM, Cookson BT, Carlson LD, Stiglich SK, Schwartz MA, Nguyen TT, Daza R, Wallis CK, Yarfitz SL, Coyle MB.	J Clin Microbiol	10.1128/jcm.39.4.1467-1476.2001	2001
Phylogeny	Gordonia hongkongensis sp. nov., isolated from blood culture and peritoneal dialysis effluent of patients in Hong Kong.	Tsang CC, Xiong L, Poon RWS, Chen JHK, Leung KW, Lam JYW, Wu AKL, Chan JFW, Lau SKP, Woo PCY	Int J Syst Evol Microbiol	10.1099/ijsem.0.001292	2016
Phylogeny	Gordonia didemni sp. nov. an actinomycete isolated from the marine ascidium Didemnum sp.	de Menezes CB, Afonso RS, de Souza WR, Parma M, de Melo IS, Zucchi TD, Fantinatti-Garboggini F	Antonie Van Leeuwenhoek	10.1007/s10482-015-0632-y	2015
Phylogeny	Gordonia lacunae sp. nov., isolated from an estuary.	le Roes M, Goodwin CM, Meyers PR	Syst Appl Microbiol	10.1016/j.syapm.2007.10.001	2007
Phylogeny	Gordonia defluvii sp. nov., an actinomycete isolated from activated sludge foam.	Soddell JA, Stainsby FM, Eales KL, Seviour RJ, Goodfellow M	Int J Syst Evol Microbiol	10.1099/ijs.0.64034-0	2006

References

#10905	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43249
#19563	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) . Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40688	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68371	Automatically annotated from API 50CH acid .
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123454	Collection of Institut Pasteur ; Curators of the CIP; CIP 104295
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Gordonia terrae (DSM 43249, ATCC 25594, NCTC 10669)

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