Gordonia bronchialis (DSM 46036, CIP 104659, IMET 7421)

Name: Gordonia bronchialis (DSM 46036, CIP 104659, IMET 7421)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10546

Type strain

Strain Designation 50017

Culture col. no. DSM 46036 CIP 104659 IMET 7421 Tsukamura 50017 50017 4 more

NCBI tax ID(s) 2054

Special Collections DSMZ CIP JMRC

History DSMZ <- IMET <- M. Tsukamura, 50017 CIP <- 1995, DSM <- IMET <- M. Tsukamura: strain 50017, Rhodococcus bronchialis

Links

Gordonia bronchialis 50017 is an obligate aerobe, Gram-positive, rod-shaped bacterium that was isolated from human sputum.

Gram-positive rod-shaped obligate aerobe Bacteria

Name and taxonomic classification

SI-ID 50710

CIP 104659,DSM 46036,IMET 7421

@ref 20215

Last LPSN update 2026-05-29 08:27:21

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Gordoniaceae

Genus Gordonia

Species Gordonia bronchialis

Full scientific name Gordonia bronchialis corrig. (Tsukamura 1971) Stackebrandt et al. 1989

Synonyms (2)

Rhodococcus bronchialis
"Gordona bronchialis"

BacDive ID	Other strains from **Gordonia bronchialis** (13)	Type strain
10542	G. bronchialis 3410, DSM 43247, ATCC 25592, JCM 3198, KCC ... (type strain)
10543	G. bronchialis 3411, N 661, T2, DSM 43341
10544	G. bronchialis M 287, DSM 43343
10545	G. bronchialis 50006, Gdf N885, DSM 46035, CIP 104658, IMET ...
10547	G. bronchialis 6520, Gdf N932, N 932, DSM 46088, CIP 104652, ...
104254	G. bronchialis STI07422(IMET), 3926, 50019, GdfN887, IMET ...
152442	G. bronchialis CCUG 46800
152451	G. bronchialis CCUG 46839
156191	G. bronchialis CCUG 60666
156998	G. bronchialis CCUG 68433
157743	G. bronchialis Turin10318_C4, DSM 107232
158983	G. bronchialis TO-C12a, DSM 110988
174467	G. bronchialis 112684, DSM 112684

Morphology

Cell morphology

@ref	Gram stain	Cell shape
117052	positive	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12401	ORGANIC MEDIUM 79 (DSMZ Medium 426)	Medium recipe at MediaDive	Name: ORGANIC MEDIUM 79 (DSMZ Medium 426) Composition: Agar 15.0 g/l Peptone 10.0 g/l Dextrose 10.0 g/l NaCl 6.0 g/l Yeast extract 2.0 g/l Casein peptone 2.0 g/l Distilled water
39075	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
117052	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
12401	positive	growth	28
39075	positive	growth	30
117052	positive	growth	30-41
117052	negative	growth	10
117052	negative	growth	45

Physiology and metabolism

Oxygen tolerance

117052

Oxygen toleranceobligate aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
117052	NaCl	positive	growth	0-6 %
117052	NaCl		growth	8 %
117052	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
117052	16947 ChEBI	citrate	-	carbon source
117052	4853 ChEBI	esculin	-	hydrolysis
117052	17632 ChEBI	nitrate	+	reduction
117052	16301 ChEBI	nitrite	-	reduction
117052	132112 ChEBI	sodium thiosulfate	+	builds gas from

Metabolite production

@ref	Chebi-ID	Metabolite	Production
117052	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
117052	15688 ChEBI	acetoin	-
117052	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
117052	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
117052	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
117052	caseinase	-	3.4.21.50
117052	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
117052	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
117052	gamma-glutamyltransferase	-	2.3.2.2
117052	gelatinase	-
117052	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
117052	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
117052	ornithine decarboxylase	-	4.1.1.17
117052	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
117052	tryptophan deaminase	-
117052	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
117052	-	+	+	+	+	+	-	+	-	-	+	+	-	-	-	+	+	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
117052	not determinedn.d.	+	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Sputum

Isolation

@ref	Sample type	Host species	Isolation date
12401	human sputum	Homo sapiens
117052	Human, Sputum	Homo sapiens	1979

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12401	2	Risk group (German classification) According to TRBA 466
117052	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome-based predictions

Literature

References

#12401	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46036
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#39075	; Curators of the CIP;
#68382	Automatically annotated from API zym .
#117052	Collection of Institut Pasteur ; Curators of the CIP; CIP 104659
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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