Name: Dinghuibacter silviterrae DHOA34
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132486

Type strain:

Species: Dinghuibacter silviterrae

Strain Designation: DHOA34

Culture col. no.: DSM 100059, CGMCC 1.15023, KCTC 42632

Strain history: <- Lihong QIU, Sun Yat-Sen Univ., 135 Xingang Road, W., Guangzhou 510275, P.R.China

NCBI tax ID(s): 1539049 (species)

SI-ID 407237

DSM 100059

Section

Dinghuibacter silviterrae DHOA34 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from forest soil.

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Chitinophagia*
	Order	*Chitinophagales*
	Family	*Chitinophagaceae*
	Genus	*Dinghuibacter*
	Species	**Dinghuibacter silviterrae**
	Full Scientific Name (LPSN)	Dinghuibacter silviterrae Lv et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43672]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.991

[Ref.: #43672]	Cell length	0.5-1.5 µm

[Ref.: #43672]	Cell width	0.3-0.7 µm

[Ref.: #43672]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #43672]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #43672]	Colony color	Yellow
[Ref.: #43672]	Colony shape	circular
[Ref.: #43672]	Incubation period	5 days
[Ref.: #43672]	Cultivation medium used	1:6 diluted R2A agar

[Ref.: #43672]	Pigment production	yes
[Ref.: #43672]	Pigment name	Flexirubin-Type pigments

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43672]

Culture medium

1:6 diluted R2A agar

[Ref.: #43672]

Culture medium growth

[Ref.: #43672]

Culture medium

Trypticase Soy Agar (TSA)

[Ref.: #43672]

Culture medium growth

[Ref.: #24275]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #24275]

Culture medium growth

[Ref.: #24275]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24275]

Culture medium composition

expand / minimize

[Ref.: #43672]

Culture medium

LB (Luria-Bertani) MEDIUM

[Ref.: #43672]

Culture medium growth

[Ref.: #43672]

Culture medium

MacConkey agar

[Ref.: #43672]

Culture medium growth

[Ref.: #43672]

Culture medium

Nutrient agar (NA)

[Ref.: #43672]

Culture medium growth

		Temperature
[Ref.: #24275]	growth	25 °C
[Ref.: #43672]	growth	16-37 °C
[Ref.: #43672]	optimum	28-30 °C
[Ref.: #67771]	growth	28-30 °C

[Ref.: #24275]	Temperature range	mesophilic
[Ref.: #43672]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43672]			optimum	6-7
[Ref.: #43672]			growth	4-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43672]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %95
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.856

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43672]		NaCl		maximum	1	%(w/v)

[Ref.: #67771]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43672]	2-dehydro-D-gluconate ChEBI	-	assimilation
[Ref.: #43672]	3-hydroxybenzoate ChEBI	-	assimilation
[Ref.: #43672]	5-dehydro-D-gluconate ChEBI	-	assimilation
[Ref.: #43672]	adipate ChEBI	+	assimilation
[Ref.: #43672]	amygdalin ChEBI	-	assimilation
[Ref.: #43672]	arabinitol ChEBI	-	assimilation
[Ref.: #43672]	arbutin ChEBI	-	assimilation
[Ref.: #43672]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #43672]	casein	-	hydrolysis
[Ref.: #43672]	cellobiose ChEBI	-	assimilation
[Ref.: #43672]	chitin ChEBI	-	hydrolysis
[Ref.: #43672]	citrate ChEBI	-	assimilation
[Ref.: #43672]	D-arabinose ChEBI	-	assimilation
[Ref.: #43672]	D-fructose ChEBI	+	assimilation
[Ref.: #43672]	D-galactose ChEBI	+	assimilation
[Ref.: #43672]	D-lyxose ChEBI	-	assimilation
[Ref.: #43672]	D-mannose ChEBI	+	assimilation
[Ref.: #43672]	D-ribose ChEBI	-	assimilation
[Ref.: #43672]	D-sorbitol ChEBI	-	assimilation
[Ref.: #43672]	D-tagatose ChEBI	-	assimilation
[Ref.: #43672]	D-xylose ChEBI	-	assimilation
[Ref.: #43672]	decanoate ChEBI	-	assimilation
[Ref.: #43672]	erythritol ChEBI	-	assimilation
[Ref.: #43672]	esculin ChEBI	-	assimilation
[Ref.: #43672]	esculin ChEBI	+	hydrolysis
[Ref.: #43672]	fucose ChEBI	-	assimilation
[Ref.: #43672]	galactitol ChEBI	-	assimilation
[Ref.: #43672]	gelatin ChEBI	-	hydrolysis
[Ref.: #43672]	gentiobiose ChEBI	+	assimilation
[Ref.: #43672]	gluconate ChEBI	-	assimilation
[Ref.: #43672]	glucose ChEBI	+	assimilation
[Ref.: #43672]	glycerol ChEBI	-	assimilation
[Ref.: #43672]	glycogen ChEBI	-	assimilation
[Ref.: #43672]	histidine ChEBI	+/-	assimilation
[Ref.: #43672]	L-alanine ChEBI	+/-	assimilation
[Ref.: #43672]	L-arabinose ChEBI	-	assimilation
[Ref.: #43672]	L-arginine ChEBI	-	hydrolysis
[Ref.: #43672]	L-proline ChEBI	-	assimilation
[Ref.: #43672]	L-rhamnose ChEBI	+	assimilation
[Ref.: #43672]	L-serine ChEBI	-	assimilation
[Ref.: #43672]	L-sorbose ChEBI	-	assimilation
[Ref.: #43672]	lactate ChEBI	-	assimilation
[Ref.: #43672]	lactose ChEBI	+	assimilation
[Ref.: #43672]	malate ChEBI	-	assimilation
[Ref.: #43672]	maltose ChEBI	-	assimilation
[Ref.: #43672]	mannitol ChEBI	+	assimilation
[Ref.: #43672]	melezitose ChEBI	+	assimilation
[Ref.: #43672]	melibiose ChEBI	+/-	assimilation
[Ref.: #43672]	methyl alpha-D-glucopyranoside ChEBI	+	assimilation
[Ref.: #43672]	methyl alpha-D-mannoside ChEBI	+	assimilation
[Ref.: #43672]	myo-inositol ChEBI	+	assimilation
[Ref.: #43672]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #43672]	nitrate ChEBI	-	reduction
[Ref.: #43672]	phenylacetate ChEBI	-	assimilation
[Ref.: #43672]	raffinose ChEBI	+	assimilation
[Ref.: #43672]	ribitol ChEBI	-	assimilation
[Ref.: #43672]	salicin ChEBI	+	assimilation
[Ref.: #43672]	starch ChEBI	+	assimilation
[Ref.: #43672]	sucrose ChEBI	+	assimilation
[Ref.: #43672]	trehalose ChEBI	+/-	assimilation
[Ref.: #43672]	urea ChEBI	-	hydrolysis
[Ref.: #43672]	xylitol ChEBI	-	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43672]		hydrogen sulfide ChEBI	no
[Ref.: #43672]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43672]	acid phosphatase	+	3.1.3.2
[Ref.: #43672]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43672]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43672]	alpha-fucosidase	+/-	3.2.1.51
[Ref.: #43672]	alpha-galactosidase	+	3.2.1.22
[Ref.: #43672]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43672]	alpha-mannosidase	+/-	3.2.1.24
[Ref.: #43672]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43672]	beta-galactosidase	+	3.2.1.23
[Ref.: #43672]	beta-glucosidase	+	3.2.1.21
[Ref.: #43672]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43672]	catalase	-	1.11.1.6
[Ref.: #43672]	cystine arylamidase	+/-	3.4.11.3
[Ref.: #43672]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43672]	esterase (C 4)	+/-
[Ref.: #43672]	esterase Lipase (C 8)	+
[Ref.: #43672]	leucine arylamidase	+	3.4.11.1
[Ref.: #43672]	lipase (C 14)	-
[Ref.: #43672]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #43672]	naphthol-AS-BI-phosphohydrolase	+/-
[Ref.: #43672]	trypsin	-	3.4.21.4
[Ref.: #43672]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	cellulose degradation	100	5 of 5
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	1,4-dihydroxy-6-naphthoate biosynthesis	100	6 of 6
[Ref.: #66794]	starch degradation	100	10 of 10
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	CMP-KDO biosynthesis	100	4 of 4
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	kanosamine biosynthesis II	100	2 of 2
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	ceramide biosynthesis	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	phenylacetate degradation (aerobic)	100	5 of 5
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	tetrahydrofolate metabolism	92.86	13 of 14
[Ref.: #66794]	phenylalanine metabolism	92.31	12 of 13
[Ref.: #66794]	pentose phosphate pathway	90.91	10 of 11
[Ref.: #66794]	Entner Doudoroff pathway	90	9 of 10
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	NAD metabolism	88.89	16 of 18
[Ref.: #66794]	d-mannose degradation	88.89	8 of 9
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	heme metabolism	85.71	12 of 14
[Ref.: #66794]	ubiquinone biosynthesis	85.71	6 of 7
[Ref.: #66794]	proline metabolism	81.82	9 of 11
[Ref.: #66794]	propionate fermentation	80	8 of 10
[Ref.: #66794]	metabolism of amino sugars and derivatives	80	4 of 5
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	O-antigen biosynthesis	80	4 of 5
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	tyrosine metabolism	78.57	11 of 14
[Ref.: #66794]	valine metabolism	77.78	7 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	serine metabolism	77.78	7 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	77.78	7 of 9
[Ref.: #66794]	lipid A biosynthesis	77.78	7 of 9
[Ref.: #66794]	lipid metabolism	77.42	24 of 31
[Ref.: #66794]	leucine metabolism	76.92	10 of 13
[Ref.: #66794]	purine metabolism	76.6	72 of 94
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	ketogluconate metabolism	75	6 of 8
[Ref.: #66794]	degradation of sugar alcohols	75	12 of 16
[Ref.: #66794]	tryptophan metabolism	73.68	28 of 38
[Ref.: #66794]	pyrimidine metabolism	73.33	33 of 45
[Ref.: #66794]	methionine metabolism	73.08	19 of 26
[Ref.: #66794]	alanine metabolism	72.41	21 of 29
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	isoprenoid biosynthesis	69.23	18 of 26
[Ref.: #66794]	histidine metabolism	68.97	20 of 29
[Ref.: #66794]	glutamate and glutamine metabolism	67.86	19 of 28
[Ref.: #66794]	degradation of pentoses	67.86	19 of 28
[Ref.: #66794]	molybdenum cofactor biosynthesis	66.67	6 of 9
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	formaldehyde oxidation	66.67	2 of 3
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	cysteine metabolism	66.67	12 of 18
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	citric acid cycle	64.29	9 of 14
[Ref.: #66794]	degradation of sugar acids	64	16 of 25
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	lysine metabolism	61.9	26 of 42
[Ref.: #66794]	non-pathway related	60.53	23 of 38
[Ref.: #66794]	glycine betaine biosynthesis	60	3 of 5
[Ref.: #66794]	lipoate biosynthesis	60	3 of 5
[Ref.: #66794]	coenzyme M biosynthesis	60	6 of 10
[Ref.: #66794]	glutathione metabolism	57.14	8 of 14
[Ref.: #66794]	degradation of hexoses	55.56	10 of 18
[Ref.: #66794]	ascorbate metabolism	54.55	12 of 22
[Ref.: #66794]	metabolism of disaccharids	54.55	6 of 11
[Ref.: #66794]	arginine metabolism	54.17	13 of 24
[Ref.: #66794]	phenylpropanoid biosynthesis	53.85	7 of 13
[Ref.: #66794]	urea cycle	53.85	7 of 13
[Ref.: #66794]	oxidative phosphorylation	50.55	46 of 91
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	selenocysteine biosynthesis	50	3 of 6
[Ref.: #66794]	myo-inositol biosynthesis	50	5 of 10
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	50	6 of 12
[Ref.: #66794]	sphingosine metabolism	50	3 of 6
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	phenol degradation	50	10 of 20
[Ref.: #66794]	glycolate and glyoxylate degradation	50	3 of 6
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	47.06	8 of 17
[Ref.: #66794]	3-phenylpropionate degradation	46.67	7 of 15
[Ref.: #66794]	sulfate reduction	46.15	6 of 13
[Ref.: #66794]	vitamin B6 metabolism	45.45	5 of 11
[Ref.: #66794]	arachidonic acid metabolism	44.44	8 of 18
[Ref.: #66794]	daunorubicin biosynthesis	44.44	4 of 9
[Ref.: #66794]	4-hydroxyphenylacetate degradation	40	4 of 10
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	gallate degradation	40	2 of 5
[Ref.: #66794]	ethylmalonyl-CoA pathway	40	2 of 5
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	vitamin B1 metabolism	38.46	5 of 13
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	androgen and estrogen metabolism	37.5	6 of 16
[Ref.: #66794]	polyamine pathway	34.78	8 of 23
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	nitrate assimilation	33.33	3 of 9
[Ref.: #66794]	vitamin B12 metabolism	32.35	11 of 34
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	carotenoid biosynthesis	27.27	6 of 22
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	catecholamine biosynthesis	25	1 of 4
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	23.08	3 of 13
[Ref.: #66794]	4-hydroxymandelate degradation	22.22	2 of 9
[Ref.: #66794]	allantoin degradation	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24275]	Sample type/isolated from	forest soil
[Ref.: #24275]	Geographic location (country and/or sea, region)	Guangdong Province, Dinghushan Biosphere Reserve (112° 31' E 23° 10' N)
[Ref.: #24275]	Country	China
[Ref.: #24275]	Country ISO 3 Code	CHN
[Ref.: #24275]	Continent	Asia
[Ref.: #24275]	Geographic location	23.1667°/112.5170°

[Ref.: #43672]	Sample type/isolated from	Soil of the forest of Dinghushan Biosphere Reserve
[Ref.: #43672]	Geographic location (country and/or sea, region)	Guangdong Province
[Ref.: #43672]	Country	China
[Ref.: #43672]	Country ISO 3 Code	CHN
[Ref.: #43672]	Continent	Asia
[Ref.: #43672]	Geographic location	23.1660°/112.5310°

[Ref.: #67771]	Sample type/isolated from	From forest soil
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KM389530 (>99% sequence identity) for Dinghuibacter silviterrae subclade from Microbeatlas

Aquatic Samples	311
Soil Samples	7965
Animal Samples	613
Plant Samples	1006
Total Samples	9895

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24275]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24275]	Dinghuibacter silviterrae strain DHOA34 16S ribosomal RNA gene, partial sequence	KM389530	1487	ENA	1539049 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Dinghuibacter silviterrae DSM 100059	GCA_004366355	contig	GenBank	1539049 tax ID	*
[Ref.: #66792]	Dinghuibacter silviterrae strain DSM 100059	1539049.3	wgs	PATRIC	1539049 tax ID	*
[Ref.: #66792]	Dinghuibacter silviterrae DSM 100059	2788499880	draft	JGI IMG/M	1539049 tax ID	*

[Ref.: #24275]	GC-content	51.6 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	51.6 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Dinghuibacter silviterrae strain DSM 100059 PATRIC: 1539049.3
[Ref.: #69481]	spore-forming	no	95	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Dinghuibacter silviterrae strain DSM 100059 PATRIC: 1539049.3
[Ref.: #69480]	motile	no	93.051	no
[Ref.: #69480]	gram-positive	no	96.809	yes
[Ref.: #69480]	anaerobic	no	99.582	yes
[Ref.: #69480]	aerobic	yes	87.591	no
[Ref.: #69480]	halophile	no	96.005	yes
[Ref.: #69480]	spore-forming	no	94.161	no
[Ref.: #69480]	thermophile	no	98.101	yes
[Ref.: #69480]	glucose-util	yes	86.869	yes
[Ref.: #69480]	flagellated	no	97.241	yes
[Ref.: #69480]	glucose-ferment	no	87.861	no

Availability in culture collections External links

[Ref.: #24275]

Culture collection no.

DSM 100059, CGMCC 1.15023, KCTC 42632

[Ref.: #90816]

SI-ID 407237

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Dinghuibacter silviterrae gen. nov., sp. nov., isolated from forest soil.	Lv YY, Wang J, Chen MH, You J, Qiu LH	Int J Syst Evol Microbiol	10.1099/ijsem.0.000940	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24275

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100059

#43672

Ying-Ying Lv, Jia Wang, Mei-Hong Chen, Jia You, Li-Hong Qiu: Dinghuibacter silviterrae gen. nov., sp. nov., isolated from forest soil. IJSEM 66: 1785 - 1791 2016 ( DOI 10.1099/ijsem.0.000940 , PubMed 26828023 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#90816

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407237.1 )

* These data were automatically processed and therefore are not curated

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Search for species Dinghuibacter silviterrae in external resources:
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Dinghuibacter silviterrae strain DSM 100059

Dinghuibacter silviterrae strain DSM 100059

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