Name: Bartonella elizabethae B91-002005
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130214

Type strain:

Species: Bartonella elizabethae

Strain Designation: B91-002005, F9251

Culture col. no.: DSM 28217, ATCC 49927, CCUG 30455, CIP 103761

Strain history: CIP <- 1993, J.S. Daly, Med. Center of Central Massachusetts, MA, USA: strain F9251

NCBI tax ID(s): 1094555 (strain), 807 (species)

SI-ID 42759

ATCC 49927, CCUG 30455, CIP 103761

Section

Bartonella elizabethae B91-002005 is a mesophilic, Gram-negative, rod-shaped bacterium that was isolated from human blood, endocarditis.

Gram-negative
rod-shaped
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Bartonellaceae*
	Genus	*Bartonella*
	Species	**Bartonella elizabethae**
	Full Scientific Name (LPSN)	Bartonella elizabethae (Daly et al. 1993) Brenner et al. 1993

Synonym

Rochalimaea elizabethae

Information on morphological and physiological properties Morphology

[Ref.: #119008]	Gram stain	negative

[Ref.: #119008]	Cell shape	rod-shaped

[Ref.: #119008]	Motility	no

[Ref.: #21531]	Type of hemolysis	gamma
[Ref.: #21531]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21531]

Culture medium

Columbia blood agar 10% (DSMZ Medium 429e)

[Ref.: #21531]

Culture medium growth

[Ref.: #21531]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #32725]

Culture medium

MEDIUM 70 - columbia agar with horse blood and hemin for Bartonella

[Ref.: #32725]

Culture medium growth

[Ref.: #32725]

Culture medium composition

expand / minimize

[Ref.: #119008]

Culture medium

CIP Medium 70

[Ref.: #119008]

Culture medium growth

[Ref.: #119008]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #119008]

Culture medium

CIP Medium 45

[Ref.: #119008]

Culture medium growth

[Ref.: #119008]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #21531]	growth	37 °C
[Ref.: #32725]	growth	37 °C
[Ref.: #119008]	growth	30-37 °C

[Ref.: #21531]	Temperature range	mesophilic
[Ref.: #32725]	Temperature range	mesophilic
[Ref.: #119008]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #119008]	nitrate ChEBI	-	reduction
[Ref.: #119008]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #119008]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #119008]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119008]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #21531]	catalase	-	1.11.1.6
[Ref.: #119008]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #21531]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #119008]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #119008]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #119008]	oxidase	-
[Ref.: #119008]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #119008]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #119008]	9388	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119008]	7667	-	-	+	+	-	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21531]	Sample type/isolated from	human blood, endocarditis
[Ref.: #21531]	Geographic location (country and/or sea, region)	Massachusetts, Brighton
[Ref.: #21531]	Country	USA
[Ref.: #21531]	Country ISO 3 Code	USA
[Ref.: #21531]	Continent	North America
[Ref.: #21531]	Geographic location	42.3464°/-71.1627°

[Ref.: #50089]	Sample type/isolated from	Human blood,endocarditis
[Ref.: #50089]	Sampling date	1993
[Ref.: #50089]	Geographic location (country and/or sea, region)	Mass,Brighton
[Ref.: #50089]	Country	USA
[Ref.: #50089]	Country ISO 3 Code	USA
[Ref.: #50089]	Continent	North America

[Ref.: #119008]	Sample type/isolated from	Human, Blood
[Ref.: #119008]	Geographic location (country and/or sea, region)	Brighton, Massachusetts
[Ref.: #119008]	Country	United States of America
[Ref.: #119008]	Country ISO 3 Code	USA
[Ref.: #119008]	Continent	North America
[Ref.: #119008]	Isolation date	1986
* marker position based on {}

Isolation sources categories

#Infection

#Medical environment

#Clinic

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence L01260 (>99% sequence identity) for Bartonella from Microbeatlas

Aquatic Samples	22
Soil Samples	29
Animal Samples	118
Plant Samples	3
Total Samples	172

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21531]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #119008]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21531]	Rochalimaea elizabethae 16S ribosomal RNA gene	L01260	1466	ENA	807 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bartonella elizabethae F9251, ATCC 49927	2545555865	draft	JGI IMG/M	1094555 tax ID	*
[Ref.: #66792]	Bartonella elizabethae F9251 = ATCC 49927	GCA_000518165	scaffold	GenBank	1094555 tax ID	*
[Ref.: #66792]	Bartonella elizabethae F9251 = ATCC 49927	GCA_000278315	scaffold	GenBank	1094555 tax ID	*
[Ref.: #66792]	Bartonella elizabethae ATCC 49927	1408427.3	wgs	PATRIC	1094555 tax ID	*
[Ref.: #66792]	Bartonella elizabethae F9251	1094555.3	wgs	PATRIC	1094555 tax ID	*
[Ref.: #66792]	Bartonella elizabethae F9251 = ATCC 49927	1094555.4	wgs	PATRIC	1094555 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bartonella elizabethae F9251 = ATCC 49927 ATCC 49927 NCBI: GCA_902825135.1
[Ref.: #69480]	flagellated	no	97.785	no
[Ref.: #69480]	gram-positive	no	98.192	no
[Ref.: #69480]	anaerobic	no	97.543	no
[Ref.: #69480]	aerobic	no	95.055	no
[Ref.: #69480]	halophile	no	58.74	no
[Ref.: #69480]	spore-forming	no	97.417	no
[Ref.: #69480]	thermophile	no	89.8	yes
[Ref.: #69480]	glucose-util	no	50	no
[Ref.: #69480]	motile	no	90.521	no
[Ref.: #69480]	glucose-ferment	no	76.028	no

Availability in culture collections External links

[Ref.: #21531]

Culture collection no.

DSM 28217, ATCC 49927, CCUG 30455, CIP 103761

[Ref.: #88757]

SI-ID 42759

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Whole-genome sequence analysis and exploration of the zoonotic potential of a rat-borne Bartonella elizabethae.	Tay ST, Kho KL, Wee WY, Choo SW	Acta Trop	10.1016/j.actatropica.2015.11.019	2015	*
Phylogeny	Rochalimaea elizabethae sp. nov. isolated from a patient with endocarditis.	Daly JS, Worthington MG, Brenner DJ, Moss CW, Hollis DG, Weyant RS, Steigerwalt AG, Weaver RE, Daneshvar MI, O'Connor SP	J Clin Microbiol	10.1128/jcm.31.4.872-881.1993	1993	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21531

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28217

#32725 ; Curators of the CIP;
#50089 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30455

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#88757

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID42759.1 )

#119008 Collection of Institut Pasteur ; Curators of the CIP; CIP 103761
* These data were automatically processed and therefore are not curated

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Search for species Bartonella elizabethae in external resources:
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Bartonella elizabethae F9251 = ATCC 49927 ATCC 49927

Change proposal

Change proposal