[Ref.: #4506]
Sample type/isolated from
industrial red wine vinegar fermentation
[Ref.: #4506]
Geographic location (country and/or sea, region)
Southern Part of Germany
[Ref.: #4506]
Country
Germany
[Ref.: #4506]
Country ISO 3 Code
DEU
[Ref.: #4506]
Continent
Europe
[Ref.: #67770]
Sample type/isolated from
Submerged cider vinegar fermentation at a factory
[Ref.: #67770]
Country
Germany
[Ref.: #67770]
Country ISO 3 Code
DEU
[Ref.: #67770]
Continent
Europe
* marker position based on {}
Isolation sources categories
#Engineered
#Food production
#Fermented
#Engineered
#Industrial
-
#Engineered
#Food production
#Beverage
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
16S Sequence information:
Only first 5 entries are displayed. Click here to see all. Click here to see only first 5 entries.
Sequence accession description
Seq. accession number
Sequence length (bp)
Sequence database
Associated NCBI tax ID
[Ref.: #20218]
Gluconacetobacter oboediens gene for 16S rRNA, partial sequence, strain: JCM 16937
AB645733
1411
65958 tax ID
*
[Ref.: #20218]
Gluconacetobacter oboediens strain LMG 18849 16S ribosomal RNA gene, partial sequence
JF794004
1352
65958 tax ID
*
[Ref.: #20218]
Gluconacetobacter oboediens strain DSM 11826 16S ribosomal RNA gene, partial sequence
JF794005
1352
65958 tax ID
*
[Ref.: #20218]
Gluconacetobacter oboediens strain LMG 18849T 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence
KC478455
740
65958 tax ID
*
[Ref.: #20218]
Gluconacetobacter oboediens strain DSM 11826T 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence
KC478456
746
65958 tax ID
*
[Ref.: #4506]
Acetobacter oboediens 16S ribosomal RNA gene
AJ001631
1482
65958 tax ID
[Ref.: #4506]
Gluconacetobacter oboediens gene for 16S rRNA, partial sequence, strain: DSM 11826
AB205221
1449
65958 tax ID
Genome sequence information:
Sequence accession description
Seq. accession number
Assembly level (bp)
Sequence database
Associated NCBI tax ID
[Ref.: #66792]
Komagataeibacter oboediens strain LMG 18849
65958.4
wgs
65958 tax ID
*
[Ref.: #66792]
Komagataeibacter oboediens LMG 18849
2846433441
draft
65958 tax ID
*
[Ref.: #67770]
Komagataeibacter oboediens LMG 18849
GCA_003207815
contig
65958 tax ID
[Ref.: #66792]
Acidobacteria bacterium CS2-C035
GCA_011773095
scaffold
1978231 tax ID
*
[Ref.: #4506]
GC-content
59.9 mol%
thermal denaturation, midpoint method (Tm)
Availability in culture collections External links
[Ref.: #4506]
Culture collection no.
DSM 11826 , JCM 16937 , LMG 18849 , NCIMB 13557, LTH 2460, BCC 36445 , BCRC 17057 , CIP 105763
[Ref.: #20218]
Associated Passport(s) in StrainInfo
48125 , 869140 , 48124 , 346575
Literature:
Topic
Title
Authors
Journal
DOI
Year
Phylogeny
Description of Acetobacter oboediens sp. nov. and Acetobacter pomorum sp. nov., two new species isolated from industrial vinegar fermentations.
Sokollek SJ, Hertel C, Hammes WP
Int J Syst Bacteriol
10.1099/00207713-48-3-935
1998
*
References
#4506
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 11826
#39823
; Curators of the CIP;
#67770
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
* These data were automatically processed and therefore are not curated
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