Komagataeibacter oboediens LTH 2460 | Type strain | DSM 11826, JCM 16937, LMG 18849, NCIMB 13557

Strain identifier

BacDive ID: 91

Type strain:

Species: Komagataeibacter oboediens

Strain Designation: LTH 2460

Culture col. no.: DSM 11826, JCM 16937, LMG 18849, NCIMB 13557

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #4506]	Domain	Bacteria
[Ref.: #4506]	Phylum	Proteobacteria
[Ref.: #4506]	Class	Alphaproteobacteria
[Ref.: #4506]	Order	Rhizobiales
[Ref.: #4506]	Family	Acetobacteraceae
[Ref.: #4506]	Genus	Komagataeibacter
[Ref.: #4506]	Species	Komagataeibacter oboediens
[Ref.: #4506]	Full Scientific Name	Komagataeibacter oboediens (Sokollek et al. 1998) Yamada et al. 2013
[Ref.: #4506]	Strain Designation	LTH 2460
[Ref.: #4506]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	13-08-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Proteobacteria
[Ref.: #20215]	Class	Alphaproteobacteria		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Family	Acetobacteraceae		Int. J. Syst. Bacteriol. 30:7*
[Ref.: #20215]	Genus	Komagataeibacter	gen. nov. (VL)	Int. J. Syst. Evol. Microbiol. 63:1
[Ref.: #20215]	Species	Komagataeibacter oboediens	comb. nov. (VL)	Int. J. Syst. Evol. Microbiol. 63:1
[Ref.: #20215]	Full Scientific Name	Komagataeibacter oboediens (Sokollek et al. 1998) Yamada et al. 2013

[Ref.: #20215]	Synonym	Acetobacter oboediens
[Ref.: #20215]	Synonym	Gluconacetobacter oboediens
[Ref.: #20215]	Synonym	Komagatabacter oboediens

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #4506]

Culture medium

RAE MEDIUM (DSMZ Medium 848), 30°C

[Ref.: #4506]

Culture medium growth

[Ref.: #4506]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #39823]

Culture medium

MEDIUM 289 - for Acetobacter intermedius

[Ref.: #39823]

Culture medium growth

[Ref.: #39823]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4506]			growth	30 ̊C
[Ref.: #39823]			growth	30 ̊C

[Ref.: #4506]	Temperature range	mesophilic
[Ref.: #39823]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #4506]

Sample type/isolated from

industrial red wine vinegar fermentation

[Ref.: #4506]

Geographic location (country and/or sea, region)

Southern Part of Germany

[Ref.: #4506]

Country

Germany

[Ref.: #4506]

Continent

Europe

Isolation sources categories

#Engineered	#Food production	#Fermented beverage
#Engineered	#Industrial	-

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #4506]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #4506]

GC-content

59.9 mol%

thermal denaturation, midpoint method (Tm)

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Gluconacetobacter oboediens gene for 16S rRNA, partial sequence, strain: JCM 16937	AB645733	16S	1411	65958	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Gluconacetobacter oboediens partial recA gene for recombinase A, strain DSM 11826	AJ519467		458	65958	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Gluconacetobacter oboediens partial dnaK gene, type strain LMG 18849T	FN391631		788	65958	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Gluconacetobacter oboediens partial groEL gene, type strain LMG 18849T	FN391704		945	65958	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Gluconacetobacter oboediens partial rpoB gene for RNA polymerase beta subunit, type strain LMG 18849T	FN391777		928	65958	*
[Ref.: #20218]	EMBL Genome project data	Gluconacetobacter oboediens genomic DNA containing ITS1, strain LMG 18849	FR716490		727	65958	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Gluconacetobacter oboediens strain LMG 18849 16S ribosomal RNA gene, partial sequence	JF794004	16S	1352	65958	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Gluconacetobacter oboediens strain DSM 11826 16S ribosomal RNA gene, partial sequence	JF794005	16S	1352	65958	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Gluconacetobacter oboediens strain LMG 18849T 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence	KC478455	16S	740	65958	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Gluconacetobacter oboediens strain DSM 11826T 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence	KC478456	16S	746	65958	*
[Ref.: #4506]	EMBL Direct submission		AJ001631
[Ref.: #4506]	DDBJ EMBL Direct submission		AB205221

Availability in culture collectionsStrain availability

[Ref.: #4506]

Culture collection no.

DSM 11826, JCM 16937, LMG 18849, NCIMB 13557

[Ref.: #4506]	Strain history	<- S. J. Sokollek and W. P. Hammes; LTH 2460
[Ref.: #39823]	Strain history	1998, G. Schüller, Univ. Hohenheim, Stuttgart, Germany: strain LTH 2460

[Ref.: #20218]

Associated Passport(s) in StrainInfo

48125, 869140, 48124, 346575

References

#4506

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11826

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39823 ; Curators of the CIP;
* These References are textmined

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