Name: Acinetobacter johnsonii 3865/60
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 8088

Type strain:

Species: Acinetobacter johnsonii

Strain Designation: 3865/60

Culture col. no.: DSM 6963, ATCC 17909, CIP 64.6, NCTC 10308, CCUG 19095, NCTC 12154, LMG 999, NCIMB 12460

Strain history: CIP <- 1964, W. Mannheim, Hyg. Inst., Marburg, Germany: strain 3865/60, "Achromobacter metalcaligenes"

NCBI tax ID(s): 1217663 (strain), 40214 (species)

SI-ID 389267

LMG 999, ATCC 17909, CCUG 19095, LMG 10579, LMG 1238, NCIMB 12460, NCTC 10308, NCTC 12154, DSM 6963, NCIB 12460, BCRC 14853, CCRC 14853, HAMBI 1969, HAMBI 1971, KCTC 12405, CIP 64.6, VTT E-981120

Special Collections

Other strains from Acinetobacter johnsonii

Section

Acinetobacter johnsonii 3865/60 is an aerobe, Gram-negative bacterium that was isolated from human duodenum.

Gram-negative
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Species	**Acinetobacter johnsonii**
	Full Scientific Name (LPSN)	Acinetobacter johnsonii Bouvet and Grimont 1986

Information on morphological and physiological properties Morphology

[Ref.: #120358]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99

[Ref.: #120358]	Cell shape	rod-shaped

[Ref.: #120358]	Motility	no

[Ref.: #2924]	Type of hemolysis	gamma
[Ref.: #2924]	Incubation period	1-2 days

[Ref.: #120358]	Hemolysis ability	1

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2924]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #2924]

Culture medium growth

[Ref.: #2924]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2924]

Culture medium composition

expand / minimize

[Ref.: #42154]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #42154]

Culture medium growth

[Ref.: #42154]

Culture medium composition

expand / minimize

[Ref.: #2924]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #2924]

Culture medium growth

[Ref.: #2924]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2924]

Culture medium composition

expand / minimize

[Ref.: #2924]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #2924]

Culture medium growth

[Ref.: #2924]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2924]

Culture medium composition

expand / minimize

[Ref.: #120358]

Culture medium

CIP Medium 72

[Ref.: #120358]

Culture medium growth

[Ref.: #120358]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #2924]		growth	30 °C
[Ref.: #2924]		growth	28 °C
[Ref.: #42154]		growth	30 °C
[Ref.: #46953]		growth	28-37 °C
[Ref.: #120358]	no	growth	41 °C
[Ref.: #120358]	no	growth	37 °C
[Ref.: #120358]	no	growth	25 °C
[Ref.: #120358]	no	growth	10 °C
[Ref.: #120358]		growth	30 °C
[Ref.: #120358]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #46953]	Oxygen tolerance	aerobe
[Ref.: #120358]	Oxygen tolerance	obligate aerobe

[Ref.: #69480]

Ability of spore formation

no Confidence in %95.174

	Salt	Tested relation		Salt conc.
[Ref.: #120358]	NaCl		growth	0-4	%
[Ref.: #120358]	NaCl	no	growth	6	%
[Ref.: #120358]	NaCl	no	growth	8	%
[Ref.: #120358]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE, API ID32E
[Ref.: #68374]	cellobiose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #120358]	citrate ChEBI	-	carbon source
[Ref.: #68374]	D-arabitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	D-galacturonic acid ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68374]	D-glucose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68374]	D-mannitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #120358]	glucose ChEBI	-	degradation
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68374]	L-arabinose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	L-arabitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	L-rhamnose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	lysine ChEBI	-	degradation	* from API ID32E
[Ref.: #68374]	malonate ChEBI	-	assimilation	* from API ID32E
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68374]	maltose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	myo-inositol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #120358]	nitrate ChEBI	+	reduction
[Ref.: #120358]	nitrate ChEBI	-	respiration
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #120358]	nitrite ChEBI	-	reduction
[Ref.: #68374]	ornithine ChEBI	-	degradation	* from API ID32E
[Ref.: #68374]	palatinose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	ribitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	sorbitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	sucrose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	trehalose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE, API ID32E
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE, API ID32E
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #120358]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #120358]		indole ChEBI	no
[Ref.: #68374]		indole ChEBI	no	* from API ID32E, API 20NE

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #120358]	acetoin ChEBI	-
[Ref.: #120358]	glucose ChEBI		-
[Ref.: #68374]	indole ChEBI			-	* from API ID32E, API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68374]	alpha-galactosidase	-	3.2.1.22	* from API ID32E, API zym
[Ref.: #68374]	alpha-glucosidase	-	3.2.1.20	* from API ID32E, API zym
[Ref.: #68374]	alpha-maltosidase	-		* from API ID32E
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68374]	arginine dihydrolase	-	3.5.3.6	* from API ID32E, API 20NE
[Ref.: #120358]	beta-galactosidase	-	3.2.1.23
[Ref.: #68374]	beta-galactosidase	-	3.2.1.23	* from API ID32E, API zym
[Ref.: #68374]	beta-glucosidase	-	3.2.1.21	* from API ID32E, API 20NE, API zym
[Ref.: #68374]	beta-glucuronidase	-	3.2.1.31	* from API ID32E, API zym
[Ref.: #2924]	catalase	+	1.11.1.6
[Ref.: #120358]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #2924]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #120358]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #120358]	gelatinase	-
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68374]	L-aspartate arylamidase	+	3.4.11.21	* from API ID32E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68374]	lipase	-		* from API ID32E
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #68374]	lysine decarboxylase	-	4.1.1.18	* from API ID32E
[Ref.: #68374]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API ID32E, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68374]	ornithine decarboxylase	-	4.1.1.17	* from API ID32E
[Ref.: #120358]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120358]	urease	-	3.5.1.5
[Ref.: #68374]	urease	-	3.5.1.5	* from API ID32E, API 20NE
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #2924]	25079	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	+
[Ref.: #2924]	23587	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-
[Ref.: #2924]	23586	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	not determinedn.d.
[Ref.: #2924]	23585	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120358]	3205	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	+	-	-	-	-	-	+	-	+	+	+	-	-	+	-	-	-	-	-	-	-	-	+	+	+	+	+	-	-	+	+	-

API® ID32E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Ornithine decarboxylaseODC	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Urease/urea hydrolysisURE	Acid from L-arabitolLARL	Acid from D-galacturonic acidGAT	Acid from 5-Ketogluconate5KG	LipaseLIP	Phenol red (Acidification)RP	beta-Glucosidasebeta GLU	Acid from D-mannitolMAN	Acid from maltoseMAL	Acid from D-adonitolADO	Acid from palatinosePLE	beta-Glucuronidasebeta GUR	MalonateMNT	Indole productionIND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta-Galactosidasebeta GAL	Acid from D-glucoseGLU	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	alpha-Glucosidasealpha GLU	alpha-Galactosidasealpha GAL	Acid from trehaloseTRE	Acid from L-rhamnoseRHA	Acid from inositolINO	Acid from cellobioseCEL	Acid from sorbitolSOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
[Ref.: #46953]	734	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120358]	13068	-	+	+	+	+	+	+	-	-	-	+	+	-	-	-	-	-	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2924]	Sample type/isolated from	human duodenum

[Ref.: #46953]	Sample type/isolated from	Duodenum

[Ref.: #120358]	Sample type/isolated from	Human, Duodenum
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Infection	#Patient	-
#Host Body-Site	#Gastrointestinal tract	#Small intestine

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2924]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #120358]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2924]	A.johnsonii 16S rRNA gene (DSM6963)	X81663	1460	GenBank ENA	40214 tax ID
[Ref.: #2924]	Acinetobacter johnsonii 16S rRNA gene, strain ATCC 17909	HE651920	1530	GenBank ENA	40214 tax ID
[Ref.: #20218]	Acinetobacter johnsonii 16S rRNA gene, partial	AJ247202	452	GenBank ENA	40214 tax ID	*
[Ref.: #124043]	Acinetobacter johnsonii ATCC 17909 gene for 16S rRNA, partial sequence.	LC752435	588	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii 16S rRNA gene (strain ATCC 17909T)	Z93440	1417	GenBank ENA	40214 tax ID	*
[Ref.: #124043]	Acinetobacter johnsonii strain DSM 6963 16S ribosomal RNA gene, partial sequence.	OP818102	1366	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 01	HE651868	693	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 03	HE651869	707	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 04	HE651870	717	GenBank ENA	40214 tax ID	*
[Ref.: #124043]	Acinetobacter johnsonii strain CIP 64.6(T) 16S ribosomal RNA gene, partial sequence.	OP854692	1433	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 05	HE651871	707	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 06	HE651872	731	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 09	HE651873	731	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 11	HE651874	717	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 12	HE651875	707	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 13	HE651876	717	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 14	HE651877	693	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 15	HE651878	693	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 16	HE651879	703	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii genomic DNA containing 16S-23S IGS, strain ATCC 17909, clone 18	HE651880	717	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii a6aw 16S ribosomal RNA gene, partial sequence	AF311990	496	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii a6b 16S ribosomal RNA gene, partial sequence	AF311991	496	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii a25 16S ribosomal RNA gene, partial sequence	AF311992	493	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii a39b 16S ribosomal RNA gene, partial sequence	AF311993	493	GenBank ENA	40214 tax ID	*
[Ref.: #20218]	Acinetobacter johnsonii a22 16S ribosomal RNA gene, partial sequence	AF311994	489	GenBank ENA	40214 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acinetobacter johnsonii DSM 6963	2657245534	draft	JGI IMG/M	40214 tax ID	*
[Ref.: #66792]	Acinetobacter johnsonii CIP 64.6	GCA_000368045	scaffold	GenBank ENA	1217663 tax ID	*
[Ref.: #66792]	Acinetobacter johnsonii NCTC10308	GCA_900444855	contig	GenBank ENA	40214 tax ID	*
[Ref.: #66792]	Acinetobacter johnsonii CIP 64.6	1217663.8	wgs	PATRIC	1217663 tax ID	*
[Ref.: #66792]	Acinetobacter johnsonii CIP 64.6	1217663.3	wgs	PATRIC	1217663 tax ID	*
[Ref.: #66792]	Acinetobacter johnsonii strain DSM 6963	40214.29	wgs	PATRIC	40214 tax ID	*

[Ref.: #2924]

GC-content

44.0 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acinetobacter johnsonii strain FDAARGOS_910 strain Not applicable PATRIC: 40214.169
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	99	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.417	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	95.174	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.387	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	99.475	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	81.092	no

Availability in culture collections External links

[Ref.: #2924]

Culture collection no.

DSM 6963, ATCC 17909, CIP 64.6, NCTC 10308, CCUG 19095, NCTC 12154, LMG 999, NCIMB 12460

[Ref.: #77515]

SI-ID 389267

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Acinetobacter kookii sp. nov., isolated from soil.	Choi JY, Ko G, Jheong W, Huys G, Seifert H, Dijkshoorn L, Ko KS	Int J Syst Evol Microbiol	10.1099/ijs.0.047969-0	2013	*
Phylogeny	Acinetobacter kyonggiensis sp. nov., a beta-glucosidase-producing bacterium, isolated from sewage treatment plant.	Lee HJ, Lee SS	J Microbiol	10.1007/s12275-010-0355-8	2011	*
Phylogeny	Diverse responses to UV-B radiation and repair mechanisms of bacteria isolated from high-altitude aquatic environments.	Fernandez Zenoff V, Sineriz F, Farias ME	Appl Environ Microbiol	10.1128/AEM.01333-06	2006	*

References

#2924

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6963

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#42154 ; Curators of the CIP;
#46953 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 19095

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68369

Automatically annotated from API 20NE .

#68374

Automatically annotated from API ID32E .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#77515

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389267.1 )

#120358 Collection of Institut Pasteur ; Curators of the CIP; CIP 64.6

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Acinetobacter johnsonii strain FDAARGOS_910 strain Not applicable

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