[Ref.: #2925] |
Sample type/isolated from |
human urine |
|
[Ref.: #44296] |
Sample type/isolated from |
Human urine |
|
[Ref.: #120367] |
Sample type/isolated from |
Human, Urine |
* marker position based on {}
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Isolation sources categories |
#Host |
#Human |
- |
#Host Body Product |
#Fluids |
#Urine |
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-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #2925] |
A.junii 16S rRNA gene (DSM6964) |
X81664 |
1459 |
|
40215 tax ID |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, direct sequence All |
HE651782 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 01 |
HE651783 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 02 |
HE651784 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 03 |
HE651785 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 05 |
HE651786 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 06 |
HE651787 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 07 |
HE651788 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 09 |
HE651789 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 10 |
HE651790 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 11 |
HE651791 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 12 |
HE651792 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 13 |
HE651793 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii 16S rRNA gene, partial |
AJ247204 |
452 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 14 |
HE651794 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii genomic DNA containing 16S-23S IGS, strain ATCC 17908, clone 15 |
HE651795 |
707 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii 16S rRNA gene (strain ATCC 17908T) |
Z93438 |
1416 |
|
40215 tax ID |
* |
[Ref.: #20218] |
Acinetobacter junii 16S rRNA gene, strain ATCC 17908 |
HE651916 |
1529 |
|
40215 tax ID |
* |
|
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Genome sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Acinetobacter junii NCTC10307 |
GCA_900444875 |
contig |
|
40215 tax ID |
* |
[Ref.: #66792] |
Acinetobacter junii strain NCTC10307 |
40215.64 |
wgs |
|
40215 tax ID |
* |
|
[Ref.: #2925] |
GC-content |
42.0 mol% |
thermal denaturation, midpoint method (Tm) |
|
-
Availability in culture collections External links
[Ref.: #2925] |
Culture collection no. |
DSM 6964, ATCC 17908, NCTC 10307, CCUG 889, KCTC 12406, CIP 64.5, CCM 2376, LMG 998, NCIMB 12459 |
[Ref.: #77513] |
SI-ID 389268
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
The impact of horizontal gene transfer on targeting the internal transcribed spacer region (ITS) to identify Acinetobacter junii strains. |
Maslunka C, Gurtler V, Seviour RJ |
J Appl Microbiol |
10.1111/jam.12800 |
2015 |
* |
|
- References
-
#2925 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 6964
|
-
-
-
#42155 |
; Curators of the CIP;
|
-
#44296 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 889
|
-
-
#68369 |
Automatically annotated from API 20NE .
|
-
#68382 |
Automatically annotated from API zym .
|
-
-
-
#77513 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID389268.1 )
|
-
#120367 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 64.5
|
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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