Plantactinospora mayteni (DSM 45238, BCC 55027, CCTCC AA 208022)

Name: Plantactinospora mayteni (DSM 45238, BCC 55027, CCTCC AA 208022)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 8045

Type strain

Culture col. no. DSM 45238 BCC 55027 CCTCC AA 208022 JCM 16905 NBRC 109088 2 more

NCBI tax ID(s) 566021

Special Collections DSMZ JCM Wink compendium Literature strains

History <- S.-K. Tang, YIM; YIM 61359 <- S. Qin and et al. DSM 45238 <-- S.-K. Tang <-- S. Qin et al. YIM 61359.

Links

Plantactinospora mayteni DSM 45238 is an aerobe, spore-forming, Gram-positive bacterium that builds an aerial mycelium and was isolated from surface-sterilized roots of Maytenus austroyunnanensis collected from tropical rainforest.

spore-forming Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 396846

TBRC2210,NBRC 109088,JCM 16905,DSM 45238

@ref 20215

Last LPSN update 2026-02-09 11:19:37

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micromonosporales

Family Micromonosporaceae

Genus Plantactinospora

Species Plantactinospora mayteni

Full scientific name Plantactinospora mayteni Qin et al. 2009

Morphology

Cell morphology

@ref	Gram stain	Confidence
29317	positive
125439	positive	99.8
125438	positive	90.783

Colony morphology

@ref	Colony color	Incubation period	Medium used
19927	Golden yellow	10-14 days	ISP 2
19927	Golden yellow	10-14 days	ISP 3
19927	Grey olive	10-14 days	ISP 4
19927	Signal white	10-14 days	ISP 5
19927	Zinc yellow	10-14 days	ISP 6
19927	Cream	10-14 days	ISP 7

Multicellular morphology

@ref	Complex name	Complex color	Medium name
19927	Aerial Mycelium	Light ivory	ISP 2
19927			ISP 3
19927			ISP 4
19927			ISP 5
19927			ISP 6
19927			ISP 7

Pigmentation

29317

Productionno

Multimedia

@ref:	15913
multimedia content:	DSM_45238.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45238.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
15913	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
15913	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
19927	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
19927	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
19927	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
19927	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
19927	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
19927	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
15913	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
15913	positive	growth	28
19927	positive	optimum	28
29317	positive	growth	15-37
29317	positive	optimum	28
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH
29317	positive	optimum	7
29317	positive	growth	6.0-8.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
29317	aerobe
125438	aerobe	90.092
125439	obligate aerobe	99.8

Spore formation

@ref	Spore formation	Confidence
29317
125438		90.806

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29317	NaCl	positive	optimum	4 %

Observation

67770

Observationquinones: MK-10(H₆), MK-10(H₈), MK-10(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
19927	22599 ChEBI	arabinose	+/-
29317	22599 ChEBI	arabinose	+	carbon source
29317	17057 ChEBI	cellobiose	+	carbon source
19927	62968 ChEBI	cellulose	-
19927	28757 ChEBI	fructose	+/-
29317	28757 ChEBI	fructose	+	carbon source
29317	28260 ChEBI	galactose	+	carbon source
19927	17234 ChEBI	glucose	+
29317	17234 ChEBI	glucose	+	carbon source
29317	17716 ChEBI	lactose	+	carbon source
29317	17306 ChEBI	maltose	+	carbon source
19927	29864 ChEBI	mannitol	+/-
29317	29864 ChEBI	mannitol	+	carbon source
29317	37684 ChEBI	mannose	+	carbon source
19927	17268 ChEBI	myo-inositol	-
29317	17632 ChEBI	nitrate	+	reduction
19927	16634 ChEBI	raffinose	-
29317	16634 ChEBI	raffinose	+	carbon source
19927	26546 ChEBI	rhamnose	+/-
29317	26546 ChEBI	rhamnose	+	carbon source
29317	33942 ChEBI	ribose	+	carbon source
29317	30911 ChEBI	sorbitol	+	carbon source
19927	17992 ChEBI	sucrose	+/-
29317	17992 ChEBI	sucrose	+	carbon source
29317	27082 ChEBI	trehalose	+	carbon source
19927	18222 ChEBI	xylose	-
29317	18222 ChEBI	xylose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
29317	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68382	trypsin	+	3.4.21.4	from API zym
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
19927	not determinedn.d.	+	+	+	+	+	+	+	+	+	-	+	-	+	-	+	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Tree
#Host Body-Site	#Plant	#Root (Rhizome)
#Host Body-Site	#Plant	#Sterilized plant part
#Climate	#Hot	#Tropical

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
15913	surface-sterilized roots of Maytenus austroyunnanensis collected from tropical rainforest	Maytenus austroyunnanensis	Yunnan Province, Xishuangbanna	China	CHN	Asia
67770	Surface-sterilized roots of Maytenus austroyunnanensis from a tropical rainforest	Maytenus austroyunnanensis	Xishuangbanna, Yunnan Province, south-west China	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
15913	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1686293v1 assembly for Plantactinospora mayteni NBRC 109088	contig	GCA_016862935	566021.3	3001240269	566021	48.69
124043	ASM3953698v1 assembly for Plantactinospora mayteni JCM 16905	scaffold	GCA_039536985			566021	38.91

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
15913	Plantactinospora mayteni strain YIM 61359 16S ribosomal RNA gene, partial sequence	FJ214343	1427		566021

GC content

@ref	GC-content (mol%)	Method
15913	69.7	high performance liquid chromatography (HPLC)
29317	69.7

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Plantactinospora mayteni NBRC 109088
NCBI: GCA_016862935

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	88.40	no
125439	motility	BacteriaNetⓘ	no	88.80	no
125439	gram_stain	BacteriaNetⓘ	positive	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Plantactinospora mayteni strain NBRC 109088
PATRIC: 566021.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.78	no
125438	anaerobic	anaerobicⓘ	no	94.54	no
125438	spore-forming	spore-formingⓘ	yes	90.81	no
125438	aerobic	aerobicⓘ	yes	90.09	yes
125438	thermophilic	thermophileⓘ	no	94.91	yes
125438	flagellated	motile2+ⓘ	no	87.00	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
	Unravelling the microbiome of eggs of the endangered sea turtle Eretmochelys imbricata identifies bacteria with activity against the emerging pathogen Fusarium falciforme.	Sarmiento-Ramirez JM, van der Voort M, Raaijmakers JM, Dieguez-Uribeondo J.	PLoS One	10.1371/journal.pone.0095206	2014
Phylogeny	Plantactinospora sonchi sp. nov., an actinobacterium isolated from the leaves of common sowthistle (Sonchus oleraceus L.).	Ma Z, Liu C, Fan J, He H, Li C, Li J, Zhao S, Xiang W, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.000668	2015
Phylogeny	Plantactinospora veratri sp. nov., an actinomycete isolated from black false hellebore root (Veratrum nigrum L.).	Xing H, Liu C, Zhang Y, Zhao J, Li C, Liu H, Li L, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijs.0.000180	2015
Phylogeny	Plantactinospora endophytica sp. nov., an actinomycete isolated from Camptotheca acuminata Decne., reclassification of Actinaurispora siamensis as Plantactinospora siamensis comb. nov. and emended descriptions of the genus Plantactinospora and Plantactinospora mayteni.	Zhu WY, Zhao LX, Zhao GZ, Duan XW, Qin S, Li J, Xu LH, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.036459-0	2011
Phylogeny	Description of Verrucosispora qiuiae sp. nov., isolated from mangrove swamp sediment, and emended description of the genus Verrucosispora.	Xi L, Zhang L, Ruan J, Huang Y	Int J Syst Evol Microbiol	10.1099/ijs.0.033787-0	2011
Phylogeny	Plantactinospora mayteni gen. nov., sp. nov., a member of the family Micromonosporaceae.	Qin S, Li J, Zhang YQ, Zhu WY, Zhao GZ, Xu LH, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.010793-0	2009

References

#15913	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45238
#19927	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25730	IJSEM 2527 2009 ( DOI 10.1099/ijs.0.010793-0 , PubMed 19622648 )
#29317	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25730
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Plantactinospora mayteni (DSM 45238, BCC 55027, CCTCC AA 208022)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_016862935

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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