Name: Dactylosporangium aurantiacum D-748
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7869

Type strain:

Species: Dactylosporangium aurantiacum

Strain Designation: D-748

Culture col. no.: DSM 43157, ATCC 23491, IFO 12592, IMET 9028, JCM 3083, KCC A-0083, NBRC 12592, RIA 922, BCRC 13312, CBS 621.67, CECT 3288, CGMCC 4.1066, IFM 1208, IMSNU 22001, IMSNU 22064, KCTC 9073, MTCC 500, NCIMB 12887, NRRL B-8018, NRRL B-8111, VKM Ac-654

Strain history: KCC A-0083 <-- J. E. Thiemann D-748.

NCBI tax ID(s): 35754 (species)

SI-ID 38041

ATCC 23491, DSM 43157, IFO 12592, IMET 9028, JCM 3083, CCRC 13312, KCTC 9073, NCIMB 12887, NRRL B-8018, NRRL B-8111, VKM Ac-654, CBS 621.67, AS 4.1066, CECT 3288, NBRC 12592, AS4.1006, BCRC 13312, CGMCC 4.1066, CGMCC 4.1006

Section

Dactylosporangium aurantiacum D-748 is a mesophilic bacterium that was isolated from soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Dactylosporangium*
	Species	**Dactylosporangium aurantiacum**
	Full Scientific Name (LPSN)	Dactylosporangium aurantiacum Thiemann et al. 1967 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10825]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10825]

Culture medium growth

[Ref.: #10825]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10825]

Culture medium composition

expand / minimize

[Ref.: #10825]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #10825]

Culture medium growth

[Ref.: #10825]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10825]

Culture medium composition

expand / minimize

[Ref.: #10825]

Culture medium

CZAPEK PEPTONE AGAR (DSMZ Medium 83)

[Ref.: #10825]

Culture medium growth

[Ref.: #10825]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10825]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10825]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #10825]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9(H₈), MK-9(H₆)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10825]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence U58528 (>99% sequence identity) for Dactylosporangium from Microbeatlas

Aquatic Samples	58
Soil Samples	1581
Animal Samples	75
Plant Samples	21
Total Samples	1735

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10825]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Dactylosporangium aurantiacum 16S ribosomal RNA gene sequence	U58528	1410	ENA	35754 tax ID	*
[Ref.: #20218]	D.aurantiacum gene for 16S rRNA (DSM 43157)	X72779	1358	ENA	35754 tax ID	*
[Ref.: #20218]	D.aurantiacum 16S rRNA gene	X93191	1476	ENA	35754 tax ID	*
[Ref.: #20218]	Dactylosporangium aurantiacum gene for 16S ribosomal RNA, partial sequence	D85480	1472	ENA	35754 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Dactylosporangium aurantiacum NRRL B-8018	GCA_000716715	contig	GenBank	35754 tax ID
[Ref.: #67770]	Dactylosporangium aurantiacum NRRL B-8111	GCA_000716055	scaffold	GenBank	35754 tax ID

[Ref.: #67770]	GC-content	73 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	73.2 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Dactylosporangium aurantiacum NRRL B-8111 NCBI: GCA_000716055.1
[Ref.: #69480]	motile	yes	57.151	no
[Ref.: #69480]	flagellated	no	93.248	no
[Ref.: #69480]	gram-positive	yes	87.665	no
[Ref.: #69480]	anaerobic	no	98.957	no
[Ref.: #69480]	halophile	no	95.851	no
[Ref.: #69480]	spore-forming	yes	93.562	no
[Ref.: #69480]	thermophile	no	98.981	yes
[Ref.: #69480]	glucose-util	yes	89.744	no
[Ref.: #69480]	aerobic	yes	90.933	no
[Ref.: #69480]	glucose-ferment	no	90.455	no

Availability in culture collections External links

[Ref.: #10825]

Culture collection no.

DSM 43157, ATCC 23491, IFO 12592, IMET 9028, JCM 3083, KCC A-0083, NBRC 12592, RIA 922, BCRC 13312, CBS 621.67, CECT 3288, CGMCC 4.1066, IFM 1208, IMSNU 22001, IMSNU 22064, KCTC 9073, MTCC 500, NCIMB 12887, NRRL B-8018, NRRL B-8111, VKM Ac-654

[Ref.: #77305]

SI-ID 38041

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Dactylosporangium cerinum sp. nov., a novel actinobacterium isolated from the rhizosphere of Pinus koraiensis Sieb. et Zucc.	Liu C, Guan X, Jin P, Li J, Li Y, Li L, Zhou Y, Shen Y, Wang X, Xiang W	Antonie Van Leeuwenhoek	10.1007/s10482-015-0478-3	2015	*
Phylogeny	Dactylosporangium maewongense sp. nov., isolated from soil.	Chiaraphongphon S, Suriyachadkun C, Tamura T, Thawai C	Int J Syst Evol Microbiol	10.1099/ijs.0.016378-0	2009	*

References

#10825

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43157

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#77305

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID38041.1 )

* These data were automatically processed and therefore are not curated

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Dactylosporangium aurantiacum NRRL B-8111

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