Name: Kocuria rhizophila DSM 348
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 7646

Type strain:

Species: Kocuria rhizophila

Culture col. no.: DSM 348, ATCC 9341, PCI 1001, JCM 20050, BCRC 10449, CCM 552, CECT 241, CIP 53.45, CNCTC 5039, IAM 1099, IFO 12708, LMG 8194, LMG 8764, LMG 8789, LMG 8816, NBRC 103217, NBRC 12708, NBRC 3232, NCIMB 8553, NCTC 8340, IMET 10397, NCDO 758

Strain history: CIP <- 1953, Y.A. Chabbert, Inst. Pasteur, Paris, France, Micrococcus luteus <- F.D.A USA: strain PCI 1001, Sarcina lutea <- E.R. Squibb & Sons

NCBI tax ID(s): 378753 (strain), 72000 (species)

SI-ID 10565

LMG 8194, ATCC 9341, CCM 552, CCUG 12, CECT 241, IAM 1099, IFO 12708, IMET 10397, LMG 8764, LMG 8789, LMG 8816, NCDO 758, NCIB 8553, NCTC 8340, CCUG 10782, NCIMB 8553, CNCTC 5039, IFO 3232, CIP 53.45, CCRC 10449, NCFB 758, KCTC 1071, KCTC 1915, NCDO 7583, KCTC 3523, CCUG 42340, NBRC 12708, NBRC 3232, BCRC 10449, CCT 2562, NBIMCC 159, VKM Ac-2214, CCUG 1622, VTT E-91474, NCAIM B.01746, NCIM 2103, CDBB 998, ACM 2644, ACM 2998, NRRL B-1018, JCM 20050, NBRC 103217, DSM 348

Special Collections

Other strains from Kocuria rhizophila

Section

Kocuria rhizophila DSM 348 is an obligate aerobe, Gram-positive bacterium that was isolated from Soil.

Gram-positive
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Kocuria*
	Species	**Kocuria rhizophila**
	Full Scientific Name (LPSN)	Kocuria rhizophila Kovács et al. 1999

Information on morphological and physiological properties Morphology

[Ref.: #122203]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %93.025

[Ref.: #122203]	Cell shape	coccus-shaped

[Ref.: #122203]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %94.5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #141]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #141]

Culture medium growth

[Ref.: #141]

Culture medium link

Medium recipe at MediaDive

[Ref.: #141]

Culture medium composition

expand / minimize

[Ref.: #36878]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #36878]

Culture medium growth

[Ref.: #36878]

Culture medium composition

expand / minimize

[Ref.: #122203]

Culture medium

CIP Medium 72

[Ref.: #122203]

Culture medium growth

[Ref.: #122203]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #141]		growth	30 °C
[Ref.: #36878]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #122203]		growth	15-41 °C
[Ref.: #122203]	no	growth	10 °C
[Ref.: #122203]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #122203]

Oxygen tolerance

obligate aerobe

Note that the displayed test results represent raw data and therefore may deviate!

Antibiotic susceptibility testing

Test 1

Test 2

Test 3

Test 4

Reference

[Ref.: #141]
Mueller-Hinton Agar
30
2
aerob
yes
Inhibition zone diameter in mm
>50
>50
>50
>50
>50
>50
44
>50
24-26
>50
44-46
46-48
26
26
30
>50
50
26
14-16
6
6
6
42
8
20
26
44
>50
>50
>50
34
48
resistant0
48
24-26
>50

[Ref.: #141]
Mueller-Hinton Agar
37


yes
Inhibition zone diameter in mm
>50
>50
>50
>50
>50
50
40
>50
24
>50
40
42
28
30
30
44-46
40
24-26
20
resistant0
18-20
10
38
12
24
28
40-42
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.

[Ref.: #141]
Mueller-Hinton Agar
30

aerob
yes
Inhibition zone diameter in mm
>50
>50
>50
>50
>50
>50
48
>50
22
>50
42
46
30
32
28
48
44
26
22
8
22
10-12
38
10
24
30
42-44
50
50
>50
32
48
resistant0
44-46
24
>50

[Ref.: #141]
Mueller-Hinton Agar
30

aerob
yes
Inhibition zone diameter in mm
>50
>50
>50
>50
>50
>50
48
>50
22
>50
42
46
30
32
28
48
44
26
22
8
22
10-12
38
10
24
30
42-44
50
50
>50
32
48
resistant0
44-46
24
>50

Only first 15 entries are displayed. Click here to see all.

[Ref.: #141]	Name of produced compound	L sorbosone
[Ref.: #141]	Name of produced compound	6 aminopenicillanic acid
[Ref.: #20216]	Name of produced compound	L-sorbosone

[Ref.: #141]	Murein short key	A11.06
[Ref.: #141]	Murein types	A3alpha L-Lys-L-Ala₃

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #122203]	hippurate ChEBI	+	hydrolysis
[Ref.: #122203]	nitrate ChEBI	-	reduction
[Ref.: #122203]	nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #122203]		indole ChEBI	no
[Ref.: #67770]		L-sorbosone	yes

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #122203]		acetoin ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #122203]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #122203]	amylase	-
[Ref.: #122203]	beta-galactosidase	-	3.2.1.23
[Ref.: #122203]	caseinase	+	3.4.21.50
[Ref.: #122203]	catalase	+	1.11.1.6
[Ref.: #122203]	DNase	-
[Ref.: #122203]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #122203]	gelatinase	+/-
[Ref.: #122203]	lecithinase	-
[Ref.: #122203]	lipase	-
[Ref.: #122203]	lysine decarboxylase	-	4.1.1.18
[Ref.: #122203]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122203]	oxidase	-
[Ref.: #122203]	protease	-
[Ref.: #122203]	tryptophan deaminase	-
[Ref.: #122203]	tween esterase	-
[Ref.: #122203]	urease	+	3.5.1.5
	Only first 10 entries are displayed. Click here to see all.

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	gallate degradation	100	5 of 5
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	phenylacetate degradation (aerobic)	100	5 of 5
[Ref.: #66794]	vitamin K metabolism	100	5 of 5
[Ref.: #66794]	lipoate biosynthesis	100	5 of 5
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	aerobactin biosynthesis	100	1 of 1
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	allantoin degradation	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	88.89	8 of 9
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	pentose phosphate pathway	81.82	9 of 11
[Ref.: #66794]	proline metabolism	81.82	9 of 11
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	ethylmalonyl-CoA pathway	80	4 of 5
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	glutamate and glutamine metabolism	78.57	22 of 28
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	citric acid cycle	78.57	11 of 14
[Ref.: #66794]	photosynthesis	78.57	11 of 14
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	urea cycle	76.92	10 of 13
[Ref.: #66794]	leucine metabolism	76.92	10 of 13
[Ref.: #66794]	alanine metabolism	75.86	22 of 29
[Ref.: #66794]	lactate fermentation	75	3 of 4
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	dTDPLrhamnose biosynthesis	75	6 of 8
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	butanoate fermentation	75	3 of 4
[Ref.: #66794]	purine metabolism	73.4	69 of 94
[Ref.: #66794]	pyrimidine metabolism	73.33	33 of 45
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	metabolism of disaccharids	72.73	8 of 11
[Ref.: #66794]	NAD metabolism	72.22	13 of 18
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	71.43	5 of 7
[Ref.: #66794]	tetrahydrofolate metabolism	71.43	10 of 14
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	4-hydroxyphenylacetate degradation	70	7 of 10
[Ref.: #66794]	Entner Doudoroff pathway	70	7 of 10
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	phenol degradation	70	14 of 20
[Ref.: #66794]	vitamin B1 metabolism	69.23	9 of 13
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	aspartate and asparagine metabolism	66.67	6 of 9
[Ref.: #66794]	4-hydroxymandelate degradation	66.67	6 of 9
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	selenocysteine biosynthesis	66.67	4 of 6
[Ref.: #66794]	sphingosine metabolism	66.67	4 of 6
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	histidine metabolism	65.52	19 of 29
[Ref.: #66794]	isoprenoid biosynthesis	65.38	17 of 26
[Ref.: #66794]	lipid metabolism	64.52	20 of 31
[Ref.: #66794]	gluconeogenesis	62.5	5 of 8
[Ref.: #66794]	arginine metabolism	62.5	15 of 24
[Ref.: #66794]	C4 and CAM-carbon fixation	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	degradation of sugar alcohols	62.5	10 of 16
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	cysteine metabolism	61.11	11 of 18
[Ref.: #66794]	tryptophan metabolism	60.53	23 of 38
[Ref.: #66794]	methionine metabolism	57.69	15 of 26
[Ref.: #66794]	ubiquinone biosynthesis	57.14	4 of 7
[Ref.: #66794]	glutathione metabolism	57.14	8 of 14
[Ref.: #66794]	propanol degradation	57.14	4 of 7
[Ref.: #66794]	oxidative phosphorylation	57.14	52 of 91
[Ref.: #66794]	non-pathway related	55.26	21 of 38
[Ref.: #66794]	lysine metabolism	54.76	23 of 42
[Ref.: #66794]	3-phenylpropionate degradation	53.33	8 of 15
[Ref.: #66794]	androgen and estrogen metabolism	50	8 of 16
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	glycolate and glyoxylate degradation	50	3 of 6
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	cholesterol biosynthesis	45.45	5 of 11
[Ref.: #66794]	vitamin B6 metabolism	45.45	5 of 11
[Ref.: #66794]	d-xylose degradation	45.45	5 of 11
[Ref.: #66794]	ascorbate metabolism	45.45	10 of 22
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	sulfate reduction	38.46	5 of 13
[Ref.: #66794]	tyrosine metabolism	35.71	5 of 14
[Ref.: #66794]	degradation of pentoses	35.71	10 of 28
[Ref.: #66794]	polyamine pathway	34.78	8 of 23
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	octane oxidation	33.33	1 of 3
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	lipid A biosynthesis	33.33	3 of 9
[Ref.: #66794]	coenzyme M biosynthesis	30	3 of 10
[Ref.: #66794]	mevalonate metabolism	28.57	2 of 7
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	degradation of hexoses	27.78	5 of 18
[Ref.: #66794]	carotenoid biosynthesis	27.27	6 of 22
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	CMP-KDO biosynthesis	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	degradation of sugar acids	24	6 of 25
[Ref.: #66794]	phenylpropanoid biosynthesis	23.08	3 of 13
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil

[Ref.: #122203]	Sample type/isolated from	Environment, Soil
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AF542072 (>99% sequence identity) for Kocuria from Microbeatlas

Aquatic Samples	275
Soil Samples	69
Animal Samples	1797
Plant Samples	67
Total Samples	2208

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #141]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #122203]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Kocuria rhizophila 16S ribosomal RNA gene, partial sequence	AF542072	1334	GenBank ENA	378753 tax ID
[Ref.: #124043]	Kocuria rhizophila DC2201 16S ribosomal RNA gene, partial sequence.	KM460939	1453	GenBank ENA	378753 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Kocuria rhizophila NCTC8340	GCA_900637835	complete	GenBank ENA	72000 tax ID	*
[Ref.: #66792]	Kocuria rhizophila DC2201	GCA_000010285	complete	GenBank ENA	378753 tax ID	*
[Ref.: #66792]	Kocuria rhizophila DC2201	378753.5	complete	PATRIC	378753 tax ID	*
[Ref.: #66792]	Kocuria rhizophila strain NCTC8340	72000.33	complete	PATRIC	72000 tax ID	*

[Ref.: #67770]

GC-content

70.4 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Kocuria rhizophila DC2201 PATRIC: 378753.5
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	89	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Kocuria rhizophila DC2201 DC2201 (= NBRC 103217) NCBI: GCA_000010285.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	93.025	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	98.002	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	87.214	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	76.834	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.5	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	94.5	no

Availability in culture collections External links

[Ref.: #141]

Culture collection no.

DSM 348, ATCC 9341, PCI 1001, JCM 20050, BCRC 10449, CCM 552, CECT 241, CIP 53.45, CNCTC 5039, IAM 1099, IFO 12708, LMG 8194, LMG 8764, LMG 8789, LMG 8816, NBRC 103217, NBRC 12708, NBRC 3232, NCIMB 8553, NCTC 8340, IMET 10397, NCDO 758

[Ref.: #77090]

SI-ID 10565

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomadura violacea sp. nov., a madurastatin A1-producing strain isolated from lichen in Thailand.	Kanchanasin P, Phongsopitanun W, Yuki M, Kudo T, Ohkuma M, Nakashima T, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.005126	2021	*
Metabolism	In vitro validation studies for adhesion factor and adhesion efficiency of probiotic Bacillus licheniformis MCC 2514 and Bifidobacterium breve NCIM 5671 on HT-29 cell lines.	Rohith HS, Halami PM	Arch Microbiol	10.1007/s00203-021-02257-y	2021	*
Phylogeny	Genome Analysis of Lactobacillus plantarum Isolated From Some Indian Fermented Foods for Bacteriocin Production and Probiotic Marker Genes.	Goel A, Halami PM, Tamang JP	Front Microbiol	10.3389/fmicb.2020.00040	2020	*
Phylogeny	Characterisation of Two Polyketides from Streptomyces sp. SKH1-2 Isolated from Roots of Musa (ABB) cv. 'Kluai Sao Kratuep Ho'.	Kuncharoen N, Fukasawa W, Iwatsuki M, Mori M, Shiomi K, Tanasupawat S	Int Microbiol	10.1007/s10123-019-00071-7	2019	*
Pathogenicity	Characterization and mode of action of a potent bio-preservative from food-grade Bacillus licheniformis MCC 2016.	Vadakedath N, Halami PM	Prep Biochem Biotechnol	10.1080/10826068.2019.1566141	2019	*
Pathogenicity	Inhibition of bacterial biofilms by carboxymethyl chitosan combined with silver, zinc and copper salts.	Goncalves RC, da Silva DP, Signini R, Naves PLF	Int J Biol Macromol	10.1016/j.ijbiomac.2017.07.048	2017	*
Enzymology	Chemical composition and antimicrobial activity of the essential oils of Onychopetalum amazonicum R.E.Fr.	de Lima BR, da Silva FM, Soares ER, de Almeida RA, da Silva Filho FA, Pereira Junior RC, Hernandez Tasco AJ, Salvador MJ, Koolen HH, de Souza AD, Pinheiro ML	Nat Prod Res	10.1080/14786419.2016.1163691	2016	*
Metabolism	Polysaccharide-based silver nanoparticles synthesized by Klebsiella oxytoca DSM 29614 cause DNA fragmentation in E. coli cells.	Baldi F, Daniele S, Gallo M, Paganelli S, Battistel D, Piccolo O, Faleri C, Puglia AM, Gallo G	Biometals	10.1007/s10534-016-9918-4	2016	*
Genetics	Complete genome sequence of the soil actinomycete Kocuria rhizophila.	Takarada H, Sekine M, Kosugi H, Matsuo Y, Fujisawa T, Omata S, Kishi E, Shimizu A, Tsukatani N, Tanikawa S, Fujita N, Harayama S	J Bacteriol	10.1128/JB.01853-07	2008	*
Phylogeny	Reclassification of ATCC 9341 from Micrococcus luteus to Kocuria rhizophila.	Tang JS, Gillevet PM	Int J Syst Evol Microbiol	10.1099/ijs.0.02372-0	2003	*
	Comparative Study of the Antimicrobial Activity of Selenium Nanoparticles With Different Surface Chemistry and Structure.	Filipovic N, Usjak D, Milenkovic MT, Zheng K, Liverani L, Boccaccini AR, Stevanovic MM	Front Bioeng Biotechnol	10.3389/fbioe.2020.624621	2021	*
	Development of a Novel Escherichia coli-Kocuria Shuttle Vector Using the Cryptic pKPAL3 Plasmid from K. palustris IPUFS-1 and Its Utilization in Producing Enantiopure (S)-Styrene Oxide.	Toda H, Itoh N	Front Microbiol	10.3389/fmicb.2017.02313	2017	*
	Genetic Variation of pln Loci Among Probiotic Lactobacillus plantarum Group Strains with Antioxidant and Cholesterol-Lowering Ability.	Devi SM, Halami PM	Probiotics Antimicrob Proteins	10.1007/s12602-017-9336-0	2019	*

References

#141	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 348

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#36878 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#77090

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID10565.1 )

#122203 Collection of Institut Pasteur ; Curators of the CIP; CIP 53.45

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Kocuria rhizophila in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Kocuria rhizophila DC2201

Kocuria rhizophila DC2201 DC2201 (= NBRC 103217)

Change proposal

Change proposal