Schumannella luteola (DSM 23141, IAM 15435, JCM 23215)

Name: Schumannella luteola (DSM 23141, IAM 15435, JCM 23215)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 7501

Type strain

Strain Designation KHIA

Culture col. no. DSM 23141 IAM 15435 JCM 23215 TISTR 1824 KHIA

NCBI tax ID(s) 472059

Special Collections DSMZ JCM

History <- JCM/RIKEN <- IAM <- S.-Y. An, Inst. Molecular and Cellular Biosci., Univ. Tokyo, Japan; KHIA IAM 15435 <-- S.-Y. An strain KHIA.

Links

Schumannella luteola KHIA is a mesophilic prokaryote that was isolated from lichen.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 404033

JCM 23215,DSM 23141

@ref 20215

Last LPSN update 2026-02-09 11:19:29

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Microbacteriaceae

Genus Schumannella

Species Schumannella luteola

Full scientific name Schumannella luteola An et al. 2009

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125439	positive	98.8
125438		90

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16726	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
16726	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.8

Observation

67770

Observationquinones: MK-11 (59%), MK-10 (28%), MK-9 (13%)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Other	#Lichen

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
16726	lichen	Tokyo	Japan	JPN	Asia
67770	Lichen	Tokyo	Japan	JPN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16726	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM1340868v1 assembly for Schumannella luteola DSM 23141	contig	GCA_013408685	472059.4	2844605367	472059	78.49
66792	ASM651745v1 assembly for Schumannella luteola KHIA	scaffold	GCA_006517455	472059.3		472059

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16726	Schumannella luteola gene for 16S ribosomal RNA, partial sequence	AB362159	1466		472059

GC content

@ref	GC-content (mol%)	Method
16726	58.7	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Schumannella luteola KHIA
NCBI: GCA_006517455

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	58.20	no
125439	motility	BacteriaNetⓘ	no	69.00	no
125439	gram_stain	BacteriaNetⓘ	positive	98.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Schumannella luteola KHIA
NCBI: GCA_006517455.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	87.95	no
125438	anaerobic	anaerobicⓘ	no	97.06	no
125438	aerobic	aerobicⓘ	yes	87.50	no
125438	spore-forming	spore-formingⓘ	no	70.91	no
125438	thermophilic	thermophileⓘ	no	96.43	yes
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Phylogenetic conservation of substrate use specialization in leaf litter bacteria.	Dolan KL, Pena J, Allison SD, Martiny JB.	PLoS One	10.1371/journal.pone.0174472	2017
Genetics	Polyphasic taxonomy and genome mining of Desertivibrio insolitus gen. nov., sp. nov., a novel psychrotolerant pectin-degrading actinobacterium isolated from desert soil.	Li S, Liu J, He HH, Han JR, Huang J, Lian WH, Liu YH, Dong L, Li WJ.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100438	2025
Phylogeny	Schumannella soli sp. nov., a novel actinomycete isolated from mangrove soil by in situ cultivation.	Li F, Lu Q, Liao S, Tuo L, Liu S, Yang Q, Shen A, Sun C	Antonie Van Leeuwenhoek	10.1007/s10482-021-01631-6	2021
Phylogeny	Schumannella luteola gen. nov., sp. nov., a novel genus of the family Microbacteriaceae.	An SY, Xiao T, Yokota A	J Gen Appl Microbiol	10.2323/jgam.54.253	2008

References

#16726	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23141
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Schumannella luteola (DSM 23141, IAM 15435, JCM 23215)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_013408685

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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