Peribacillus psychrosaccharolyticus (DSM 6, ATCC 23296, DSM 13778)

Name: Peribacillus psychrosaccharolyticus (DSM 6, ATCC 23296, DSM 13778)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 748

Type strain

Strain Designation T25B, B-3394

Culture col. no. DSM 6 ATCC 23296 DSM 13778 LMG 9580 NCIMB 11729 4 more

NCBI tax ID(s) 1174504 1407

Special Collections DSMZ CCUG CIP

History <- J.L. Stokes, T25B CIP <- 2001, CCUG <- 1991, L.K. Nakamura, NRRL, Peoria, USA: strain B-3394

Links

Peribacillus psychrosaccharolyticus T25B is an obligate aerobe, Gram-positive, motile bacterium that was isolated from soil or lowland marsh.

Gram-positive motile rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 1166

LMG 9580,ATCC 23296,CCM 2118,DSM 6,NCIMB 11729,NCIB 11729,CCUG 28882,NRRL B-3394,DSM 13778,CECT 4074,CCRC 11739,CFBP 2980,CIP 106932,KCTC 3399,BCRC 11739,KACC 10924,NRRL NRS-1518,NBRC 101233,CGMCC 1.3664,VTT E-021925

@ref 20215

Last LPSN update 2026-02-09 11:17:56

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Peribacillus

Species Peribacillus psychrosaccharolyticus

Full scientific name Peribacillus psychrosaccharolyticus (Priest et al. 1989 ex Larkin and Stokes 1967) Patel and Gupta 2020

Synonyms (1)

Bacillus psychrosaccharolyticus

BacDive ID	Other strains from **Peribacillus psychrosaccharolyticus** (2)	Type strain
746	P. psychrosaccharolyticus T15A, DSM 2270, ATCC 23297
747	P. psychrosaccharolyticus T27B, DSM 2271, ATCC 23298

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
122032	positive	rod-shaped

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
2014	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
2014	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
41557	MEDIUM 29- Brain heart agar		Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g)
122032	CIP Medium 29	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
2014	positive	growth	20
41557	positive	growth	20
122032	positive	growth	22-45
122032	negative	growth	10
122032	negative	growth	55

Culture pH

@ref	Ability	Type	PH
122032	positive	growth	6

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
122032	obligate aerobe
125439	obligate aerobe	95.4

Spore formation

@ref	Spore formation	Confidence
125438		93.802

Halophily

@ref	Salt	Growth	Tested relation	Concentration
122032	NaCl	positive	growth	0-2 %
122032	NaCl		growth	4 %
122032	NaCl		growth	6 %
122032	NaCl		growth	8 %
122032	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
122032	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
122032	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
122032	17632 ChEBI	nitrate	+	reduction
122032	17632 ChEBI	nitrate	-	respiration
122032	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
122032	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
122032	15688 ChEBI	acetoin	-
122032	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
122032	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
122032	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
122032	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122032	caseinase	-	3.4.21.50
122032	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
122032	DNase	+
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	+		from API zym
122032	gamma-glutamyltransferase	-	2.3.2.2
122032	gelatinase	-
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
122032	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
122032	ornithine decarboxylase	-	4.1.1.17
122032	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
122032	tryptophan deaminase	-
122032	tween esterase	-
122032	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122032	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
122032	not determinedn.d.	+	-	-	+	+	+	-	-	-	-	+	-	+	-	-	-	+/-	+	-	-	-	+	+	+	+	+	+	+	+	+/-	+/-	+	-	+/-	+/-	-	+/-	-	+	-	-	-	-	-	-	-	+	-	+/-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122032	not determinedn.d.	+	-	-	+	-	-	-	-	-	+	+	-	+	-	-	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Environmental	#Terrestrial	#Wetland (Swamp)

Isolation

2014

Sample typesoil or lowland marsh

Taxonmaps

69479

Global distribution of 16S sequence AB681415 (>99% sequence identity) for Peribacillus psychrosaccharolyticus subclade from Microbeatlas

Aquatic Samples	78
Soil Samples	50
Animal Samples	32
Plant Samples	3
Total Samples	163

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2014	1	Risk group (German classification) According to TRBA 466
122032	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	BacPsy2.0 assembly for Peribacillus psychrosaccharolyticus ATCC 23296	contig	GCA_000305495	1174504.3	2547132175	1174504	20.93

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Bacillus psychrosaccharolyticus gene for 16S ribosomal RNA	AB021195	1507	1174504
20218	B.psychrosaccharolyticus 16S ribosomal RNA	X60635	1426	1174504
20218	Bacillus psychrosaccharolyticus gene for 16S rRNA, partial sequence, strain: NBRC 101233	AB681415	1471	1174504
124043	Peribacillus psychrosaccharolyticus ATCC 23296 16S ribosomal RNA gene, partial sequence.	KY471022	599	1174504

GC content

@ref	GC-content (mol%)	Method
2014	38.5	Buoyant density centrifugation (BD)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Peribacillus psychrosaccharolyticus ATCC 23296
NCBI: GCA_000305495

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	95.40	no
125439	gram_stain	BacteriaNetⓘ	variable	82.60	no
125439	motility	BacteriaNetⓘ	yes	81.90	no
125439	spore_formation	BacteriaNetⓘ	yes	88.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacillus psychrosaccharolyticus ATCC 23296
PATRIC: 1174504.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	75.40	no
125438	anaerobic	anaerobicⓘ	no	93.77	yes
125438	spore-forming	spore-formingⓘ	yes	93.80	no
125438	aerobic	aerobicⓘ	yes	71.36	yes
125438	thermophilic	thermophileⓘ	no	92.91	yes
125438	flagellated	motile2+ⓘ	yes	84.04	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Genome of the Psychrophilic Bacterium Bacillus psychrosaccharolyticus, a Potential Source of 2'-Deoxyribosyltransferase for Industrial Nucleoside Synthesis.	Fresco-Taboada A, Del Cerro C, Fernandez-Lucas J, Arroyo M, Acebal C, Garcia JL, de la Mata I.	Genome Announc	10.1128/genomea.00309-13	2013
Enzymology	Nucleoside 2'-deoxyribosyltransferase from psychrophilic bacterium Bacillus psychrosaccharolyticus--preparation of an immobilized biocatalyst for the enzymatic synthesis of therapeutic nucleosides.	Fresco-Taboada A, Serra I, Fernandez-Lucas J, Acebal C, Arroyo M, Terreni M, de la Mata I.	Molecules	10.3390/molecules190811231	2014
	Productive and economic effects of adding Bacillus amyloliquefaciens CECT 5940 to bread waste-based diets in laying hens	Manteiga A, Changule A, Manjate N, Magaia D, Chilala F, Joaquim L, Chivale E, dos Anjos F, Garcia-Herreros M, Bila C.	Vet World		2025
	Application of Bacillus amyloliquefaciens CECT 5940 influenced muscle satellite cells, PCNA and acute phase protein secretion in broilers.	Karaffova V, Szaboova R, Tothova C, Zitnan R, Cechova M, Levkut M, Hudec E, Sevcikova Z, Rontgen M, Albrecht E, Herich R.	Vet Res Commun	10.1007/s11259-025-10769-x	2025
	Safety and efficacy of a feed additive consisting of Bacillus velezensis CECT 5940 (Ecobiol®) for laying hens and other birds for egg production (Evonik Operations GmbH).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Villa RE, Azimonti G, Bonos E, Christensen H, Durjava M, Dusemund B, Gehring R, Glandorf B, Kouba M, Lopez-Alonso M, Marcon F, Nebbia C, Pechova A, Prieto-Maradona M, Rohe I, Theodoridou K, Anguita M, Innocenti ML, Brozzi R, Garcia-Cazorla Y, Ortuno J, Valeri P.	EFSA J	10.2903/j.efsa.2025.9554	2025
	Optimizing laying hen diets: effect of partial maize meal replacement with wheat bran or biscuits crumbs and Bacillus amyloliquefaciens CECT 5940.	Manteiga AF, Changule AP, Magaia DH, Manjate NJ, Chilala FD, Joaquim LA, Chivale EJ, Anjos FD, Tomo OHT, Garcia-Herreros M, Bila C.	Front Vet Sci	10.3389/fvets.2025.1557640	2025
	Bacillus amyloliquefaciens Regulates the Keap1/Nrf2 Signaling Pathway to Improve the Intestinal (Caco-2 Cells and Chicken Jejunum) Oxidative Stress Response Induced by Lipopolysaccharide (LPS).	Chen X, Zheng A, Li S, Wang Z, Chen Z, Chen J, Zou Z, Liang H, Liu G.	Antioxidants (Basel)	10.3390/antiox13121550	2024
Pathogenicity	Streamlining Bacillus Strain Selection Against Listeria monocytogenes Using a Fluorescence-Based Infection Assay Integrated into a Multi-Tiered Validation Pipeline	Lorente-Torres B, Castanera P, Ferrero H, Fernandez-Martinez S, Adejoh Ocholi S, Llano-Verdeja J, Javadimarand F, Carnicero-Mayo Y, Herrero-Gonzalez A, Puente-Sanz A, Sainz Machin I, Voigt I, Guerrero Villanueva S, Lopez Garcia A, Martin Gomez E, Ogbonna J, Gonzalo-Orden J, Aparicio J, Mateos L, Mourenza A, Letek M.	Antibiotics (Basel)		2025
Metabolism	Antimicrobial and bactericidal impacts of Bacillus amyloliquefaciens CECT 5940 on fecal shedding of pathogenic bacteria in dairy calves and adult dogs.	Vazquez-Mendoza P, Elghandour MMM, Alaba PA, Sanchez-Aparicio P, Alonso-Fresan MU, Barbabosa-Pliego A, Salem AZM.	Microb Pathog	10.1016/j.micpath.2017.11.040	2018
	Potential of Bacillus pumilus to directly promote plant growth.	Dobrzynski J, Jakubowska Z, Dybek B.	Front Microbiol	10.3389/fmicb.2022.1069053	2022
Pathogenicity	Antimicrobial Properties of Essential Oils Obtained from Autochthonous Aromatic Plants.	Boy FR, Benito MJ, Cordoba MG, Rodriguez A, Casquete R.	Int J Environ Res Public Health	10.3390/ijerph20031657	2023
	Dietary Bacillus velezensis KNF-209 supplementation improves growth performance, enhances immunity, and promotes gut health in broilers.	Liu Y, Xiong M, Hu X, Li Y, Zhang W, He W, Luo S, Zang J, Yang W, Chen Y.	Poult Sci	10.1016/j.psj.2024.103946	2024
Genetics	Comparative Genomics Within the Bacillus Genus Reveal the Singularities of Two Robust Bacillus amyloliquefaciens Biocontrol Strains.	Magno-Perez-Bryan MC, Martinez-Garcia PM, Hierrezuelo J, Rodriguez-Palenzuela P, Arrebola E, Ramos C, de Vicente A, Perez-Garcia A, Romero D.	Mol Plant Microbe Interact	10.1094/mpmi-02-15-0023-r	2015
	In vitro assessment of the immunomodulatory effects of probiotic Bacillus strains on chicken PBMCs.	Larsberg F, Sprechert M, Hesse D, Falker-Gieske C, Loh G, Brockmann GA, Kreuzer-Redmer S.	Front Immunol	10.3389/fimmu.2024.1415009	2024
	Growth Increase in the Herbaceous Plant Centella asiatica by the Plant Growth-Promoting Rhizobacteria Priestia megaterium HyangYak-01.	Jo H, Lim K, Ibal JC, Kim MC, Kim HB, Baek C, Heo YM, Lee H, Kang S, Lee DG, Shin JH.	Plants (Basel)	10.3390/plants12132398	2023
	Effects of different addition levels of CHM-JM113 on growth performance, antioxidant capacity, organ index, and intestinal health of AA broilers.	Fu G, Zhang M, Huang Y, Han R, Qi K, Yin L, Zhao D, Huang Y, Ma T, Wang L.	Front Vet Sci	10.3389/fvets.2024.1388173	2024
Phylogeny	Effects of dietary supplementation of Bacillus amyloliquefaciens CECT 5940 and Enterococcus faecium CECT 4515 in adult healthy dogs.	Gonzalez-Ortiz G, Castillejos L, Mallo JJ, Angels Calvo-Torras M, Dolores Baucells M.	Arch Anim Nutr	10.1080/1745039x.2013.830517	2013
Metabolism	Metabolites of Lactobacillus plantarum 2142 prevent oxidative stress-induced overexpression of proinflammatory cytokines in IPEC-J2 cell line.	Paszti-Gere E, Szeker K, Csibrik-Nemeth E, Csizinszky R, Marosi A, Palocz O, Farkas O, Galfi P.	Inflammation	10.1007/s10753-012-9462-5	2012
	Safety and efficacy of the feed additive consisting of Bacillus velezensis CECT 5940 (Ecobiol^®) for turkeys for fattening, turkeys reared for breeding, minor poultry species for fattening and reared for laying and ornamental birds (Evonik Operations GmbH).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Fasmon Durjava M, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Ramos F, Sanz Y, Villa RE, Woutersen R, Saarela M, Brozzi R, Galobart J, Pettenati E, Revez J.	EFSA J	10.2903/j.efsa.2021.6620	2021
	Probiotic Bacillus Strains Enhance T Cell Responses in Chicken.	Larsberg F, Sprechert M, Hesse D, Loh G, Brockmann GA, Kreuzer-Redmer S.	Microorganisms	10.3390/microorganisms11020269	2023
	Role of fourteen XRE-DUF397 pairs from Streptomyces coelicolor as regulators of antibiotic production and differentiation. New players in a complex regulatory network.	Riascos C, Martinez-Carrasco A, Diaz M, Santamaria RI.	Front Microbiol	10.3389/fmicb.2023.1217350	2023
	Garvicins AG1 and AG2: Two Novel Class IId Bacteriocins of Lactococcus garvieae Lg-Granada.	Maldonado-Barragan A, Alegria-Carrasco E, Blanco MDM, Vela AI, Fernandez-Garayzabal JF, Rodriguez JM, Gibello A.	Int J Mol Sci	10.3390/ijms23094685	2022
	Effects of dietary Bacillus amyloliquefaciens CECT 5940 supplementation on growth performance, antioxidant status, immunity, and digestive enzyme activity of broilers fed corn-wheat-soybean meal diets.	Sun Y, Zhang Y, Liu M, Li J, Lai W, Geng S, Yuan T, Liu Y, Di Y, Zhang W, Zhang L.	Poult Sci	10.1016/j.psj.2021.101585	2022
	Phytochemicals Determination, and Antioxidant, Antimicrobial, Anti-Inflammatory and Anticancer Activities of Blackberry Fruits.	Gil-Martinez L, Mut-Salud N, Ruiz-Garcia JA, Falcon-Pineiro A, Maijo-Ferre M, Banos A, De la Torre-Ramirez JM, Guillamon E, Verardo V, Gomez-Caravaca AM.	Foods	10.3390/foods12071505	2023
	Establishment of a Sonotrode Extraction Method and Evaluation of the Antioxidant, Antimicrobial and Anticancer Potential of an Optimized Vaccinium myrtillus L. Leaves Extract as Functional Ingredient.	Gil-Martinez L, Aznar-Ramos MJ, Del Carmen Razola-Diaz M, Mut-Salud N, Falcon-Pineiro A, Banos A, Guillamon E, Gomez-Caravaca AM, Verardo V.	Foods	10.3390/foods12081688	2023
	Dietary Use of Methionine Sources and Bacillus amyloliquefaciens CECT 5940 Influences Growth Performance, Hepatopancreatic Histology, Digestion, Immunity, and Digestive Microbiota of Litopenaeus vannamei Fed Reduced Fishmeal Diets.	Casillas-Hernandez R, Gonzalez-Galaviz JR, Rodriguez-Anaya LZ, Gil-Nunez JC, Rodriguez-Jaramillo MDC.	Animals (Basel)	10.3390/ani13010043	2022
	Antioxidant, Antihypertensive and Antimicrobial Properties of Phenolic Compounds Obtained from Native Plants by Different Extraction Methods.	Boy FR, Casquete R, Martinez A, Cordoba MG, Ruiz-Moyano S, Benito MJ.	Int J Environ Res Public Health	10.3390/ijerph18052475	2021
Metabolism	Antifungal Activity of Biocontrol Agents In Vitro and Potential Application to Reduce Mycotoxins (Aflatoxin B1 and Ochratoxin A).	Illueca F, Vila-Donat P, Calpe J, Luz C, Meca G, Quiles JM.	Toxins (Basel)	10.3390/toxins13110752	2021
	Exploring the Antibacterial Activity of Pestalotiopsis spp. under Different Culture Conditions and Their Chemical Diversity Using LC-ESI-Q-TOF-MS.	Aguilar-Perez MM, Torres-Mendoza D, Vasquez R, Rios N, Cubilla-Rios L.	J Fungi (Basel)	10.3390/jof6030140	2020
Metabolism	A colorimetric assay for the determination of acetyl xylan esterase or cephalosporin C acetyl esterase activities using 7-amino cephalosporanic acid, cephalosporin C, or acetylated xylan as substrate.	Martinez-Martinez I, Montoro-Garcia S, Lozada-Ramirez JD, Sanchez-Ferrer A, Garcia-Carmona F.	Anal Biochem	10.1016/j.ab.2007.06.030	2007
	Assessment of the application for renewal of authorisation of Ecobiol^® (Bacillus amyloliquefaciens CECT 5940) as a feed additive for chickens for fattening and its extension of use for chickens reared for laying.	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Kos Durjava M, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Sanz Y, Villa RE, Jaume Galobart RW, Galobart J, Gregoretti L, Innocenti M, Lopez-Galvez G, Sofianidis K, Vettori MV, Brozzi R.	EFSA J	10.2903/j.efsa.2020.6014	2020
	Bacillus spp. and Pisolithus tinctorius effects on Quercus ilex ssp. ballota: a study on tree growth, rhizosphere community structure and mycorrhizal infection.	Domenech J, Ramos-Solano B, Probanza A, Lucas-Garcia JA, Colon JJ, Gutierrez-Manero FJ.	For Ecol Manage	10.1016/j.foreco.2004.02.026	2004
	Brown Macroalgae (Phaeophyceae): A Valuable Reservoir of Antimicrobial Compounds on Northern Coast of Spain.	Rubino S, Peteiro C, Aymerich T, Hortos M.	Mar Drugs	10.3390/md20120775	2022
	Multi-Strain-Probiotic-Loaded Nanoparticles Reduced Colon Inflammation and Orchestrated the Expressions of Tight Junction, NLRP3 Inflammasome and Caspase-1 Genes in DSS-Induced Colitis Model.	Alkushi AG, Elazab ST, Abdelfattah-Hassan A, Mahfouz H, Salem GA, Sheraiba NI, Mohamed EAA, Attia MS, El-Shetry ES, Saleh AA, ElSawy NA, Ibrahim D.	Pharmaceutics	10.3390/pharmaceutics14061183	2022
	Addition of Grape Skin and Stems Extracts in Wines during the Storage to Reduce the Sulfur Dioxide: Impact on Red Wine Quality.	Casquete R, Benito MJ, Perez-Nevado F, Martinez A, Martin A, de Guia Cordoba M.	Int J Environ Res Public Health	10.3390/ijerph18052783	2021
	Modulations of genes related to gut integrity, apoptosis, and immunity underlie the beneficial effects of Bacillus amyloliquefaciens CECT 5940 in broilers fed diets with different protein levels in a necrotic enteritis challenge model.	Gharib-Naseri K, de Paula Dorigam JC, Doranalli K, Kheravii S, Swick RA, Choct M, Wu SB.	J Anim Sci Biotechnol	10.1186/s40104-020-00508-4	2020
	Effects of Inoculation with PGPR Bacillus and Pisolithus tinctorius on Pinus pinea L. Growth, Bacterial rhizosphere Colonization, and Mycorrhizal Infection.	Probanza A, Mateos JL, Lucas Garcia JA, Ramos B, De Felipe MR, Gutierrez Manero FJ.	Microb Ecol	10.1007/s002480000081	2001
	Probiotic Properties of Bifidobacterium longum KABP042 and Pediococcus pentosaceus KABP041 Show Potential to Counteract Functional Gastrointestinal Disorders in an Observational Pilot Trial in Infants.	Asto E, Huedo P, Altadill T, Aguilo Garcia M, Sticco M, Perez M, Espadaler-Mazo J.	Front Microbiol	10.3389/fmicb.2021.741391	2021
	Bacillus amyloliquefaciens CECT 5940 alone or in combination with antibiotic growth promoters improves performance in broilers under enteric pathogen challenge.	de Oliveira MJK, Sakomura NK, de Paula Dorigam JC, Doranalli K, Soares L, Viana GDS.	Poult Sci	10.3382/ps/pez223	2019
Enzymology	Expression and secretion of Bacillus polymyxa neopullulanase in Saccharomyces cerevisiae.	Yebra MJ, Blasco A, Sanz P.	FEMS Microbiol Lett	10.1111/j.1574-6968.1999.tb13353.x	1999
	Synthesis, In Silico and In Vitro Evaluation of Antimicrobial and Toxicity Features of New 4-[(4-Chlorophenyl)sulfonyl]benzoic Acid Derivatives.	Apostol TV, Chifiriuc MC, Draghici C, Socea LI, Marutescu LG, Olaru OT, Nitulescu GM, Pahontu EM, Saramet G, Barbuceanu SF.	Molecules	10.3390/molecules26165107	2021
	Bacillus amyloliquefaciens CECT 5940 improves performance and gut function in broilers fed different levels of protein and/or under necrotic enteritis challenge.	Gharib-Naseri K, Dorigam JCP, Doranalli K, Morgan N, Swick RA, Choct M, Wu SB.	Anim Nutr	10.1016/j.aninu.2020.05.004	2021
	Dominant Bacterial Phyla from the Human Gut Show Widespread Ability To Transform and Conjugate Bile Acids.	Lucas LN, Barrett K, Kerby RL, Zhang Q, Cattaneo LE, Stevenson D, Rey FE, Amador-Noguez D.	mSystems	10.1128/msystems.00805-21	2021
Enzymology	Bacterial Cyanuric Acid Hydrolase for Water Treatment.	Yeom S, Mutlu BR, Aksan A, Wackett LP.	Appl Environ Microbiol	10.1128/aem.02175-15	2015
	Sodium salt medium-chain fatty acids and Bacillus-based probiotic strategies to improve growth and intestinal health of gilthead sea bream (Sparus aurata).	Simo-Mirabet P, Piazzon MC, Calduch-Giner JA, Ortiz A, Puyalto M, Sitja-Bobadilla A, Perez-Sanchez J.	PeerJ	10.7717/peerj.4001	2017
	Vitellogenins are new high molecular weight components and allergens (Api m 12 and Ves v 6) of Apis mellifera and Vespula vulgaris venom.	Blank S, Seismann H, McIntyre M, Ollert M, Wolf S, Bantleon FI, Spillner E.	PLoS One	10.1371/journal.pone.0062009	2013
	Recent Trends on Mitigative Effect of Probiotics on Oxidative-Stress-Induced Gut Dysfunction in Broilers under Necrotic Enteritis Challenge: A Review.	Obianwuna UE, Agbai Kalu N, Wang J, Wang J, Zhang H, Qi G, Qiu K, Wu S.	Antioxidants (Basel)	10.3390/antiox12040911	2023
Enzymology	Innovative Approaches Using Lichen Enriched Media to Improve Isolation and Culturability of Lichen Associated Bacteria.	Biosca EG, Flores R, Santander RD, Diez-Gil JL, Barreno E.	PLoS One	10.1371/journal.pone.0160328	2016
Pathogenicity	Efficacy of iclaprim against wild-type and thymidine kinase-deficient methicillin-resistant Staphylococcus aureus isolates in an in vitro fibrin clot model.	Entenza JM, Haldimann A, Giddey M, Lociuro S, Hawser S, Moreillon P.	Antimicrob Agents Chemother	10.1128/aac.00325-09	2009
Metabolism	Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family.	Seffernick JL, Erickson JS, Cameron SM, Cho S, Dodge AG, Richman JE, Sadowsky MJ, Wackett LP.	J Bacteriol	10.1128/jb.00791-12	2012
Enzymology	Multiplex detection of nine food-borne pathogens by mPCR and capillary electrophoresis after using a universal pre-enrichment medium.	Villamizar-Rodriguez G, Fernandez J, Marin L, Muniz J, Gonzalez I, Lombo F.	Front Microbiol	10.3389/fmicb.2015.01194	2015
Metabolism	The RNA polymerase omega factor RpoZ is regulated by PhoP and has an important role in antibiotic biosynthesis and morphological differentiation in Streptomyces coelicolor.	Santos-Beneit F, Barriuso-Iglesias M, Fernandez-Martinez LT, Martinez-Castro M, Sola-Landa A, Rodriguez-Garcia A, Martin JF.	Appl Environ Microbiol	10.1128/aem.00465-11	2011
Enzymology	Biochemical and mutational studies of the Bacillus cereus CECT 5050T formamidase support the existence of a C-E-E-K tetrad in several members of the nitrilase superfamily.	Soriano-Maldonado P, Martinez-Gomez AI, Andujar-Sanchez M, Neira JL, Clemente-Jimenez JM, Las Heras-Vazquez FJ, Rodriguez-Vico F, Martinez-Rodriguez S.	Appl Environ Microbiol	10.1128/aem.00312-11	2011
Metabolism	Assessment of the bacteriocinogenic potential of marine bacteria reveals lichenicidin production by seaweed-derived Bacillus spp.	Prieto ML, O'Sullivan L, Tan SP, McLoughlin P, Hughes H, O'Connor PM, Cotter PD, Lawlor PG, Gardiner GE.	Mar Drugs	10.3390/md10102280	2012
Metabolism	Iron requirements and aluminum sensitivity of an hydroxamic acid-requiring strain of Bacillus megaterium.	Davis WB, McCauley MJ, Byers BR.	J Bacteriol	10.1128/jb.105.2.589-594.1971	1971
Enzymology	Structure and function of L-lactate dehydrogenases from thermophilic, mesophilic and psychrophilic bacteria, IX. Identification, isolation and nucleotide sequence of two L-lactate dehydrogenase genes of the psychrophilic bacterium Bacillus psychrosaccharolyticus.	Vckovski V, Schlatter D, Zuber H	Biol Chem Hoppe Seyler	10.1515/bchm3.1990.371.1.103	1990
Genetics	Noncontiguous finished genome sequence and description of Bacillus testis strain SIT10 sp. nov.	Cimmino T, Traore SI, Valentini C, le Page S, Sokhna C, Diallo A, Raoult D, Rolain JM.	New Microbes New Infect	10.1016/j.nmni.2016.03.007	2016
Phylogeny	Bacillus gossypii sp. nov., isolated from the stem of Gossypium hirsutum.	Kampfer P, Busse HJ, McInroy JA, Glaeser SP	Int J Syst Evol Microbiol	10.1099/ijsem.0.000555	2015
Phylogeny	Bacillus huizhouensis sp. nov., isolated from a paddy field soil.	Li J, Yang G, Wu M, Zhao Y, Zhou S	Antonie Van Leeuwenhoek	10.1007/s10482-014-0208-2	2014

References

#2014	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#41557	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122032	Collection of Institut Pasteur ; Curators of the CIP; CIP 106932
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Peribacillus psychrosaccharolyticus (DSM 6, ATCC 23296, DSM 13778)

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