Name: Microbacterium awajiense YM13-414
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7440

Type strain:

Species: Microbacterium awajiense

Strain Designation: YM13-414

Culture col. no.: DSM 18907, JCM 16544, MBIC 08276, KACC 14367, NBRC 103565

Strain history: DSM 18907 <-- H. Kasai YM13-414.

NCBI tax ID(s): 415214 (species)

SI-ID 406323

DSM 18907

Section

Microbacterium awajiense YM13-414 is a mesophilic bacterium that was isolated from sand sediment.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Microbacterium*
	Species	**Microbacterium awajiense**
	Full Scientific Name (LPSN)	Microbacterium awajiense Kageyama et al. 2008

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7767]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #7767]

Culture medium growth

[Ref.: #7767]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7767]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7767]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #7767]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-12, MK-13, MK-14

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7767]	Sample type/isolated from	sand sediment
[Ref.: #7767]	Geographic location (country and/or sea, region)	Awaji Island, shore of Yura
[Ref.: #7767]	Country	Japan
[Ref.: #7767]	Country ISO 3 Code	JPN
[Ref.: #7767]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Sediment (at a depth of 20 cm) of the shore of Yura
[Ref.: #67770]	Geographic location (country and/or sea, region)	Awaji Island, Hyogo Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Sandy
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7767]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7767]	Microbacterium awajiense gene for 16S rRNA, partial sequence	AB286027	1469	ENA	415214 tax ID

[Ref.: #7767]	GC-content	70 mol%
[Ref.: #67770]	GC-content	70 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #7767]

Culture collection no.

DSM 18907, JCM 16544, MBIC 08276, KACC 14367, NBRC 103565

[Ref.: #76888]

SI-ID 406323

References

#7767

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18907

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#76888

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406323.1 )

* These data were automatically processed and therefore are not curated

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