Name: Albibacter methylovorans DM 10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7215

Type strain:

Species: Albibacter methylovorans

Strain Designation: DM 10

Culture col. no.: DSM 22840, DSM 13819, VKM B-2236

Strain history: <- N. V. Doronina, Inst. Biochem. Physiol. Microorg., RAS, Pushchino, Russia

NCBI tax ID(s): 128802 (species)

SI-ID 49528

DSM 13819, VKM B-2236, DSM 22840

Section

Albibacter methylovorans DM 10 is a mesophilic bacterium that was isolated from ground water contaminated with dichloromethane.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Methylocystaceae*
	Genus	*Albibacter*
	Species	**Albibacter methylovorans**
	Full Scientific Name (LPSN)	Albibacter methylovorans Doronina et al. 2001

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16420]

Culture medium

MINERAL MEDIUM WITH VITAMINS (DSMZ Medium 462)

[Ref.: #16420]

Culture medium growth

[Ref.: #16420]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16420]

Culture medium composition

expand / minimize

[Ref.: #16420]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #16420]

Culture medium growth

[Ref.: #16420]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16420]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16420]			growth	28 °C

[Ref.: #16420]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16420]	Sample type/isolated from	ground water contaminated with dichloromethane
[Ref.: #16420]	Country	Switzerland
[Ref.: #16420]	Country ISO 3 Code	CHE
[Ref.: #16420]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	-
#Environmental	#Aquatic	#Groundwater

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FR733694 (>99% sequence identity) for Albibacter methylovorans from Microbeatlas

Aquatic Samples	6
Soil Samples	4
Animal Samples	10
Plant Samples	1
Total Samples	21

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16420]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16420]	Albobacter methylovorans 16S ribosomal RNA gene, partial sequence	AF273213	1409	ENA	128802 tax ID
[Ref.: #20218]	Albibacter methylovorans partial 16S rRNA gene, type strain DSM22840T	FR733694	1476	ENA	128802 tax ID	*

[Ref.: #16420]

GC-content

66.7 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #16420]

Culture collection no.

DSM 22840, DSM 13819, VKM B-2236

[Ref.: #76667]

SI-ID 49528

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Chenggangzhangella methanolivorans gen. nov., sp. nov., a member of the family Methylocystaceae, transfer of Methylopila helvetica Doronina et al. 2000 to Albibacter helveticus comb. nov. and emended description of the genus Albibacter.	Yang LQ, Liu L, Salam N, Xiao M, Kim CJ, Hozzein WN, Park DJ, Li WJ, Zhang HW	Int J Syst Evol Microbiol	10.1099/ijsem.0.001062	2016	*
Phylogeny	Albibacter methylovorans gen. nov., sp. nov., a novel aerobic, facultatively autotrophic and methylotrophic bacterium that utilizes dichloromethane.	Doronina NV, Trotsenko YA, Tourova TP, Kuznetsov BB, Leisinger T	Int J Syst Evol Microbiol	10.1099/00207713-51-3-1051	2001	*

References

#16420

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22840

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#76667

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49528.1 )

* These data were automatically processed and therefore are not curated

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