Name: Methylobacterium goesingense iEII3
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 7199

Type strain:

Species: Methylobacterium goesingense

Strain Designation: iEII3

Culture col. no.: DSM 21331, CCUG 56109

Strain history: <- P. Kämpfer, Univ. Giessen, Germany; iEII3 <- A. Sessitsch

NCBI tax ID(s): 243690 (species)

SI-ID 400894

DSM 21331, CCUG 56109

Special Collections

DSMZ
CCUG

Section

Methylobacterium goesingense iEII3 is a bacterium that was isolated from endosphere of the Ni-hyperaccumulating plant Thlapi goesingense.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Methylobacteriaceae*
	Genus	*Methylobacterium*
	Species	**Methylobacterium goesingense**
	Full Scientific Name (LPSN)	Methylobacterium goesingense Idris et al. 2012

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15618]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #15618]

Culture medium growth

[Ref.: #15618]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15618]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #15618]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15618]	Sample type/isolated from	endosphere of the Ni-hyperaccumulating plant Thlapi goesingense
[Ref.: #15618]	Host species	Thlapi goesingense
[Ref.: #15618]	Country	Austria
[Ref.: #15618]	Country ISO 3 Code	AUT
[Ref.: #15618]	Continent	Europe

[Ref.: #60863]	Sample type/isolated from	Plant,Thlaspi goesingense,hyperaccumulating
[Ref.: #60863]	Geographic location (country and/or sea, region)	Redschlag
[Ref.: #60863]	Country	Austria
[Ref.: #60863]	Country ISO 3 Code	AUT
[Ref.: #60863]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Endosphere

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY364020 (>99% sequence identity) for Methylobacterium from Microbeatlas

Aquatic Samples	1965
Soil Samples	2415
Animal Samples	7622
Plant Samples	2969
Total Samples	14971

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15618]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15618]	Methylobacterium sp. iEII3 16S ribosomal RNA gene, partial sequence	AY364020	1476	GenBank ENA	243690 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Methylobacterium goesingense DSM 21331	2928566807	draft	JGI IMG/M	243690 tax ID	*
[Ref.: #66792]	Methylobacterium goesingense DSM 21331	GCA_022179225	contig	GenBank ENA	243690 tax ID	*

Availability in culture collections External links

[Ref.: #15618]

Culture collection no.

DSM 21331, CCUG 56109

[Ref.: #76652]

SI-ID 400894

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Characterization of Ni-tolerant methylobacteria associated with the hyperaccumulating plant Thlaspi goesingense and description of Methylobacterium goesingense sp. nov.	Idris R, Kuffner M, Bodrossy L, Puschenreiter M, Monchy S, Wenzel WW, Sessitsch A	Syst Appl Microbiol	10.1016/j.syapm.2006.01.011	2006	*

References

#15618

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21331

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#60863 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56109

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#76652

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400894.1 )

* These data were automatically processed and therefore are not curated

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