Name: Methanosphaera cuniculi 1R-7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6979

Type strain:

Species: Methanosphaera cuniculi

Strain Designation: 1R-7

Culture col. no.: DSM 4103, OCM 183

Strain history: <- B. Biavati, 1R-7

NCBI tax ID(s): 1077256 (species)

SI-ID 47793

DSM 4103

Section

Methanosphaera cuniculi 1R-7 is an anaerobe, mesophilic archaeon that was isolated from rectum of rabbit.

anaerobe
mesophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Methanobacteria*
	Order	*Methanobacteriales*
	Family	*Methanobacteriaceae*
	Genus	*Methanosphaera*
	Species	**Methanosphaera cuniculi**
	Full Scientific Name (LPSN)	Methanosphaera cuniculi Biavati et al. 1990

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1589]

Culture medium

METHANOSPHAERA CUNICULI MEDIUM (DSMZ Medium 404)

[Ref.: #1589]

Culture medium growth

[Ref.: #1589]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1589]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1589]			growth	37 °C

[Ref.: #1589]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1589]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1589]	Sample type/isolated from	rectum of rabbit
[Ref.: #1589]	Geographic location (country and/or sea, region)	Bologna
[Ref.: #1589]	Country	Italy
[Ref.: #1589]	Country ISO 3 Code	ITA
[Ref.: #1589]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Leporidae (Rabbit/Hare)
#Host Body-Site	#Gastrointestinal tract	#Rectum

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1589]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1589]	Methanosphaera cuniculi partial 16S rRNA gene, type strain DSM 4103T	HE582783	1486	ENA	1077256 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Methanosphaera cuniculi 1R-7	GCA_002287195	contig	GenBank	1077256 tax ID	*
[Ref.: #66792]	Methanosphaera cuniculi DSM 4103	GCA_003149675	contig	GenBank	1077256 tax ID	*
[Ref.: #66792]	Methanosphaera cuniculi 1R-7	2802429591	draft	JGI IMG/M	1077256 tax ID	*
[Ref.: #66792]	Methanosphaera cuniculi strain DSM 4103	1077256.4	wgs	PATRIC	1077256 tax ID	*

[Ref.: #1589]

GC-content

23.0 mol%

Availability in culture collections External links

[Ref.: #1589]

Culture collection no.

DSM 4103, OCM 183

[Ref.: #76440]

SI-ID 47793

References

#1589

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4103

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#76440

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47793.1 )

* These data were automatically processed and therefore are not curated

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