Name: Methanobacterium aarhusense H2-LR
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6948

Type strain:

Species: Methanobacterium aarhusense

Strain Designation: H2-LR

Culture col. no.: DSM 15219, ATCC BAA-828, NBRC 105225

Strain history: <- A. G. Shlimon, University of Aarhus, Department of Microbiology, Institute of Biological Sciences, Denmark; H2-LR <- A. G. Shlimon {2001}

NCBI tax ID(s): 256826 (species)

SI-ID 132021

ATCC BAA-828, DSM 15219

Special Collections

DSMZ

Section

Methanobacterium aarhusense H2-LR is an anaerobe archaeon that was isolated from marine sediment.

anaerobe
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Methanobacteria*
	Order	*Methanobacteriales*
	Family	*Methanobacteriaceae*
	Genus	*Methanobacterium*
	Species	**Methanobacterium aarhusense**
	Full Scientific Name (LPSN)	Methanobacterium aarhusense Shlimon et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #5763]

Incubation period

3-7 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5763]

Culture medium

METHANOGENIUM MEDIUM (H2/CO2) (DSMZ Medium 141)

[Ref.: #5763]

Culture medium growth

[Ref.: #5763]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5763]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5763]			growth	40 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5763]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5763]	Sample type/isolated from	marine sediment
[Ref.: #5763]	Geographic location (country and/or sea, region)	Arhus Bay
[Ref.: #5763]	Country	Denmark
[Ref.: #5763]	Country ISO 3 Code	DNK
[Ref.: #5763]	Continent	Europe
[Ref.: #5763]	Geographic location	56.1556°/10.3233°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY386124 (>99% sequence identity) for Methanobacterium aarhusense subclade from Microbeatlas

Aquatic Samples	227
Soil Samples	18
Animal Samples	13
Plant Samples	11
Total Samples	269

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5763]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5763]	Methanobacterium aarhusense 16S ribosomal RNA gene, partial sequence	AY386124	1333	GenBank ENA	256826 tax ID

[Ref.: #5763]

GC-content

34.9 mol%

Availability in culture collections External links

[Ref.: #5763]

Culture collection no.

DSM 15219, ATCC BAA-828, NBRC 105225

[Ref.: #76410]

SI-ID 132021

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Methanobacterium aarhusense sp. nov., a novel methanogen isolated from a marine sediment (Aarhus Bay, Denmark).	Shlimon AG, Friedrich MW, Niemann H, Ramsing NB, Finster K	Int J Syst Evol Microbiol	10.1099/ijs.0.02994-0	2004	*

References

#5763

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15219

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#76410

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID132021.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Methanobacterium aarhusense in external resources:
SILVA
BRENDA
PANGAEA
GBIF