Listeria marthii DSM 23813 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from soil.
Gram-positive motile rod-shaped aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Listeriaceae |
| Genus Listeria |
| Species Listeria marthii |
| Full scientific name Listeria marthii Graves et al. 2010 |
| BacDive ID | Other strains from Listeria marthii (3) | Type strain |
|---|---|---|
| 155029 | L. marthii CCUG 56149 | |
| 155030 | L. marthii CCUG 56150 | |
| 155031 | L. marthii CCUG 56151 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 17384 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 17384 | BHI MEDIUM (DSMZ Medium 215) | Medium recipe at MediaDive | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water | ||
| 40548 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 120844 | CIP Medium 6 | Medium recipe at CIP |
| 29490 | Spore formationno |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | + | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68376 | 18333 ChEBI | D-arabitol | + | builds acid from | from API LIST |
| 68371 | 18333 ChEBI | D-arabitol | + | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68376 | 16988 ChEBI | D-ribose | - | builds acid from | from API LIST |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68376 | 16443 ChEBI | D-tagatose | - | builds acid from | from API LIST |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68376 | 65327 ChEBI | D-xylose | - | builds acid from | from API LIST |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 29490 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68376 | 4853 ChEBI | esculin | + | hydrolysis | from API LIST |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 29490 | 17234 ChEBI | glucose | + | carbon source | |
| 68376 | 29042 ChEBI | glucose 1-phosphate | - | builds acid from | from API LIST |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68376 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API LIST |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 29490 | 17716 ChEBI | lactose | + | carbon source | |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 29490 | 17306 ChEBI | maltose | + | carbon source | |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68376 | 320061 ChEBI | methyl alpha-D-glucopyranoside | + | builds acid from | from API LIST |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | + | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | + | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 120844 | 17632 ChEBI | nitrate | - | reduction | |
| 120844 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | + | builds acid from | from API 50CH acid |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | + | 3.2.1.24 | from API zym |
| 68376 | alpha-mannosidase | + | 3.2.1.24 | from API LIST |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68376 | beta-glucosidase | + | 3.2.1.21 | from API LIST |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 17384 | catalase | + | 1.11.1.6 | |
| 29490 | catalase | + | 1.11.1.6 | |
| 120844 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 17384 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 120844 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 120844 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120844 | not determinedn.d. | + | - | - | - | - | - | - | - | - | - | + | + | + | - | - | - | - | - | - | + | + | + | + | + | + | + | + | + | + | - | - | + | - | - | - | +/- | - | + | + | - | - | - | - | - | + | - | - | - | - |
| @ref | Differentiation L. innocura(+)/ L.monoytogenes(-)DIM | ESC | alpha MAN | DARL | XYL | RHA | Acid from methyl-alpha-D-glucopyranosideMDG | RIB | G1P | TAG | beta hemolysis presentbeta HEM | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17384 | - | + | + | + | - | - | + | - | - | - | not determinedn.d. | |
| 17384 | - | + | + | + | - | - | + | - | - | - | not determinedn.d. |
| @ref | Sample type | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 17384 | soil | Finger Lakes National Forest, New York | USA | USA | North America | ||
| 60878 | Soil,forest area | 1997-07-14 | NY,Finger Lakes National Forest | USA | USA | North America | |
| 120844 | Environment, Soil, forest | Finger lakes national forest, New York | United States of America | USA | North America |
Global distribution of 16S sequence EU545982 (>99% sequence identity) for Listeria monocytogenes from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | |
|---|---|---|---|---|---|---|---|
| 124043 | ASM18386v1 assembly for Listeria marthii FSL S4-120 | chromosome | 702457 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 17384 | Listeria marthii strain NR-9579 16S ribosomal RNA gene, partial sequence | EU545982 | 1394 | 529731 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Metabolism | Characterization and regulation of expression of an antifungal peptide from hemolymph of an insect, Manduca sexta. | Al Souhail Q, Hiromasa Y, Rahnamaeian M, Giraldo MC, Takahashi D, Valent B, Vilcinskas A, Kanost MR. | Dev Comp Immunol | 10.1016/j.dci.2016.03.006 | 2016 | |
| Bacterial Microcompartment-Dependent 1,2-Propanediol Utilization Stimulates Anaerobic Growth of Listeria monocytogenes EGDe. | Zeng Z, Smid EJ, Boeren S, Notebaart RA, Abee T. | Front Microbiol | 10.3389/fmicb.2019.02660 | 2019 | ||
| Genetics | Comparative Genomics Reveal the Utilization Ability of Variable Carbohydrates as Key Genetic Features of Listeria Pathogens in Their Pathogenic Lifestyles. | Lu Q, Zhu X, Long Q, Yi X, Yang A, Long X, Cao D. | Pathogens | 10.3390/pathogens11121430 | 2022 | |
| Genetics | An Educational Bioinformatics Project to Improve Genome Annotation. | Amatore Z, Gunn S, Harris LK. | Front Microbiol | 10.3389/fmicb.2020.577497 | 2020 | |
| Genetics | Comparative Genomics of Listeria Sensu Lato: Genus-Wide Differences in Evolutionary Dynamics and the Progressive Gain of Complex, Potentially Pathogenicity-Related Traits through Lateral Gene Transfer. | Chiara M, Caruso M, D'Erchia AM, Manzari C, Fraccalvieri R, Goffredo E, Latorre L, Miccolupo A, Padalino I, Santagada G, Chiocco D, Pesole G, Horner DS, Parisi A. | Genome Biol Evol | 10.1093/gbe/evv131 | 2015 | |
| Biotechnology | Establishment of a simple and rapid identification method for Listeria spp. by using high-resolution melting analysis, and its application in food industry. | Ohshima C, Takahashi H, Phraephaisarn C, Vesaratchavest M, Keeratipibul S, Kuda T, Kimura B. | PLoS One | 10.1371/journal.pone.0099223 | 2014 | |
| Ultra deep sequencing of Listeria monocytogenes sRNA transcriptome revealed new antisense RNAs. | Behrens S, Widder S, Mannala GK, Qing X, Madhugiri R, Kefer N, Abu Mraheil M, Rattei T, Hain T. | PLoS One | 10.1371/journal.pone.0083979 | 2014 | ||
| Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss. | den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M. | BMC Genomics | 10.1186/1471-2164-11-688 | 2010 | ||
| Phylogenetic identification of bacterial MazF toxin protein motifs among probiotic strains and foodborne pathogens and potential implications of engineered probiotic intervention in food. | Yan X, Gurtler JB, Fratamico PM, Hu J, Juneja VK. | Cell Biosci | 10.1186/2045-3701-2-39 | 2012 | ||
| Metabolism | Structural basis for the inhibition of the chromatin repressor BAHD1 by the bacterial nucleomodulin LntA. | Lebreton A, Job V, Ragon M, Le Monnier A, Dessen A, Cossart P, Bierne H. | mBio | 10.1128/mbio.00775-13 | 2014 | |
| Phylogeny | Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest. | Graves LM, Helsel LO, Steigerwalt AG, Morey RE, Daneshvar MI, Roof SE, Orsi RH, Fortes ED, Milillo SR, den Bakker HC, Wiedmann M, Swaminathan B, Sauders BD | Int J Syst Evol Microbiol | 10.1099/ijs.0.014118-0 | 2009 |
| #17384 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23813 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #29490 | Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25890 (see below) |
| #40548 | ; Curators of the CIP; |
| #60878 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56148 |
| #68371 | Automatically annotated from API 50CH acid . |
| #68376 | Automatically annotated from API LIST . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #120844 | Collection of Institut Pasteur ; Curators of the CIP; CIP 110187 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data