Ligilactobacillus apodemi (DSM 16748, ASB7)

Name: Ligilactobacillus apodemi (DSM 16748, ASB7)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6645

Type strain

Strain Designation ASB7

Culture col. no. DSM 16748 ASB7

NCBI tax ID(s) 307126

Special Collections DSMZ Mouse DZIF

History DSMZ <- R. Osawa; ASB7

Links

Ligilactobacillus apodemi ASB7 is an anaerobe bacterium that was isolated from feces, wild Japanese wood mouse.

anaerobe genome sequence Bacteria

Name and taxonomic classification

SI-ID 297633

DSM 16748

@ref 20215

Last LPSN update 2026-05-29 08:26:27

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Ligilactobacillus

Species Ligilactobacillus apodemi

Full scientific name Ligilactobacillus apodemi (Osawa et al. 2006) Zheng et al. 2020

Synonyms (1)

Lactobacillus apodemi

BacDive ID	Other strains from **Ligilactobacillus apodemi** (4)	Type strain
6646	L. apodemi ASB1, ASB-1, DSM 16634, CIP 108913, JCM 16172, ... (type strain)
6647	L. apodemi ASB2, DSM 16635
6648	L. apodemi ASB6, DSM 16648
6649	L. apodemi ASB8, DSM 16649

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	positive	92.97

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6491	MRS MEDIUM (DSMZ Medium 11)		Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
6491	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
6491	anaerobe
6491	microaerophile

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6491	feces, wild Japanese wood mouse	Kyotanabe	Japan	JPN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6491	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM2462240v1 assembly for Ligilactobacillus apodemi DSM 16748	contig	GCA_024622405	307126.4	307126	74.21

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Ligilactobacillus apodemi DSM 16748
NCBI: GCA_024622405.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.97	no
125438	anaerobic	anaerobicⓘ	no	83.91	no
125438	aerobic	aerobicⓘ	no	95.04	no
125438	spore-forming	spore-formingⓘ	no	86.45	no
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	89.00	no

Literature

Title	Authors	Journal	DOI	Year
Lactobacillus acidophilus potentiates oncolytic virotherapy through modulating gut microbiota homeostasis in hepatocellular carcinoma.	Zhang J, Yang J, Luo J, Wu W, Luo H, Wei W, Lyu H, Wang Y, Yi H, Zhang Y, Fan Z, Lyu H, Kanakaveti VP, Qin B, Yuan P, Yang R, Zhang H, Zuo T, Felsher DW, Lee MH, Li K.	Nat Commun	10.1038/s41467-025-58407-z	2025

References

#6491	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16748
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Ligilactobacillus apodemi (DSM 16748, ASB7)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_024622405

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media