Lentilactobacillus parabuchneri (DSM 5707, ATCC 49374, NCDO 2748)

Name: Lentilactobacillus parabuchneri (DSM 5707, ATCC 49374, NCDO 2748)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6541

Type strain

Strain Designation 6E

Culture col. no. DSM 5707 ATCC 49374 NCDO 2748 NCIB 8838 CCUG 32261 10 more

NCBI tax ID(s) 152331

Special Collections DSMZ CCUG JCM KCTC CIP

History <- NCDO <- M.E. Sharpe <- NCIB <- A.C. Hayward, 6E CCUG 32261 <-- NCIMB 8838 <-- A. C. Hayward 6E. CIP <- 1989, NCFB <- 1984, M.E. Sharpe, reading, UK <- 1960, NCIB <- A.C. Hayward: strain 6E, Lactobacillus buchneri

Links

Lentilactobacillus parabuchneri 6E is an anaerobe, mesophilic prokaryote that was isolated from human saliva.

anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 127919

NBRC 107865,LMG 11457,DSM 5707,NCDO 2748,ATCC 49374,CCUG 32261,CIP 103368,NCFB 2748,NCIMB 8838,JCM12493,NCIB 8838,CECT 5740,BCRC 14743,CCRC 14743,KCTC 3503,VTT E-93503

@ref 20215

Last LPSN update 2026-02-09 11:19:14

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lentilactobacillus

Species Lentilactobacillus parabuchneri

Full scientific name Lentilactobacillus parabuchneri (Farrow et al. 1989) Zheng et al. 2020

Synonyms (2)

Lactobacillus ferintoshensis
Lactobacillus parabuchneri

BacDive ID	Other strains from **Lentilactobacillus parabuchneri** (5)	Type strain
6540	L. parabuchneri A16, DSM 5706, NCDO 1066
6542	L. parabuchneri DSM 5708, ATCC 11307, CCM 1833, DSM 20173, ...
6543	L. parabuchneri Lb 14, DSM 5987, LTH 1389
6544	L. parabuchneri R7-84, DSM 15352, CIP 106749, JCM 12511, ...
173357	L. parabuchneri OC 770, CRBIP24.87

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		90
125438		94.034	positive

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
2300	MRS MEDIUM (DSMZ Medium 11)	Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
34251	MEDIUM 41- for Lactobacillus, Leuconostoc, Weissella, Pediococcus, Sporolactobacillus inulinus		Distilled water make up to (1000.000 ml);Man Rogosa Sharp broth (55.000 g)
121542	CIP Medium 41	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
2300	positive	growth	28	mesophilic
34251	positive	growth	30	mesophilic
50937	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
50937	anaerobe
50937	microaerophile
125439	microaerophile	95.2

Spore formation

@ref	Spore formation	Confidence
125439		98

Murein

@ref	Murein short key	Type
2300	A11.31	A4alpha L-Lys-D-Asp

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	+	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
2300	-	-	-	-	+	+	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	+/-	-	not determinedn.d.
2300	-	-	-	-	+	+	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	+/-	not determinedn.d.	+/-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Oral cavity and Airways	#Saliva

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
2300	human saliva
50937	Human saliva	United Kingdom	GBR	Europe
67770	Human saliva
121542	Human, Saliva

Taxonmaps

69479

Global distribution of 16S sequence LC383822 (>99% sequence identity) for Lentilactobacillus from Microbeatlas

Aquatic Samples	1599
Soil Samples	1041
Animal Samples	7375
Plant Samples	556
Total Samples	10571

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2300	1	Risk group (German classification) According to TRBA 466
121542	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2982306v1 assembly for Lentilactobacillus parabuchneri LMG 11457	scaffold	GCA_029823065	152331.102	8116807758	152331	72.29
67770	ASM143531v1 assembly for Lentilactobacillus parabuchneri DSM 5707 = NBRC 107865	scaffold	GCA_001435315	1423784.4	2667527643	1423784	69.08
66792	ASM159188v1 assembly for Lentilactobacillus parabuchneri DSM 5707 = NBRC 107865	contig	GCA_001591885	1423784.5	2731957671	1423784	59.68

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Lactobacillus parabuchneri gene for 16S ribosomal RNA, partial sequence, strain: DSM 5707	AB370877	1497	152331
20218	Lactobacillus parabuchneri strain DSM 5707 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence	EU161610	521	152331
20218	Lactobacillus parabuchneri gene for 16S ribosomal RNA, partial sequence	AB205056	1556	152331
20218	Lactobacillus parabuchneri gene for 16S rRNA, partial sequence, strain: JCM 12493	AB289211	489	152331
20218	Lactobacillus parabuchneri 16S rRNA gene, type strain: LMG 11457	AJ970317	1527	152331
20218	Lactobacillus parabuchneri 16S ribosomal RNA gene, partial sequence	AY026751	1219	152331
67770	Lactobacillus parabuchneri JCM 12493 gene for 16S ribosomal RNA, partial sequence	LC383822	1513	152331

GC content

@ref	GC-content (mol%)	Method
2300	44.0
67770	44	thermal denaturation, midpoint method (Tm)
67770	43.5	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Lentilactobacillus parabuchneri DSM 5707 = NBRC 107865
NCBI: GCA_001435315

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.00	no
125439	motility	BacteriaNetⓘ	no	78.10	no
125439	gram_stain	BacteriaNetⓘ	positive	60.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	95.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus parabuchneri DSM 5707 = NBRC 107865
PATRIC: 1423784.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	94.03	no
125438	anaerobic	anaerobicⓘ	no	80.96	no
125438	spore-forming	spore-formingⓘ	no	80.14	no
125438	aerobic	aerobicⓘ	no	90.35	no
125438	thermophilic	thermophileⓘ	no	96.36	yes
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	In vitro characterization of lactic acid bacteria and bifidobacteria from wild and domestic pigs: probiotic potential for post-weaning piglets.	Kavanova K, Kostovova I, Moravkova M, Kubasova T, Crhanova M.	BMC Microbiol	10.1186/s12866-024-03711-9	2025
Genetics	Comparative Genomics of Lentilactobacillus parabuchneri isolated from dairy, KEM complex, Makgeolli, and Saliva Microbiomes.	Gumustop I, Ortakci F.	BMC Genomics	10.1186/s12864-022-09053-y	2022
	alpha-Lipoic acid increases phagocytosis of some lactic acid bacteria via modulation of CD36 expression.	Nomura N, Miyadai N, Kawase I.	Biosci Microbiota Food Health	10.12938/bmfh.2024-019	2025
Pathogenicity	Bacterial Metabolite Reuterin Attenuated LPS-Induced Oxidative Stress and Inflammation Response in HD11 Macrophages.	Xu Y, Ding X, Wang Y, Li D, Xie L, Liang S, Zhang Y, Li W, Fu A, Zhan X.	Antioxidants (Basel)	10.3390/antiox11091662	2022
	Mature Biofilm Degradation by Potential Probiotics: Aggregatibacter actinomycetemcomitans versus Lactobacillus spp.	Jaffar N, Ishikawa Y, Mizuno K, Okinaga T, Maeda T.	PLoS One	10.1371/journal.pone.0159466	2016
Phylogeny	Lentilactobacillus laojiaonis sp. nov., isolated from the mud in a fermentation cellar for the production of Chinese liquor.	Zhao Q, Yang S, Bao G, Wang W, Miao L, Wang S, Shen C, Li Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.005349	2022

References

#2300	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5707
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#34251	; Curators of the CIP;
#50937	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 32261
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121542	Collection of Institut Pasteur ; Curators of the CIP; CIP 103368
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Lentilactobacillus parabuchneri (DSM 5707, ATCC 49374, NCDO 2748)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Murein

Metabolite utilization

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_029823065

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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