[Ref.: #8488] |
Sample type/isolated from |
tomato pulp |
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[Ref.: #47424] |
Sample type/isolated from |
Tomato pulp |
|
[Ref.: #67770] |
Sample type/isolated from |
Tomato pulp |
|
[Ref.: #117067] |
Sample type/isolated from |
Food, Tomato pulp |
* marker position based on {}
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Isolation sources categories |
#Host |
#Plants |
#Herbaceous plants (Grass,Crops) |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Lactobacillus buchneri gene for 16S ribosomal RNA, partial sequence, strain: JCM 1115 |
LC064887 |
1475 |
|
1581 tax ID |
[Ref.: #20218] |
Lentilactobacillus buchneri gene for 16S rRNA, partial sequence, strain: YIT 0077 |
AB429368 |
1567 |
|
1581 tax ID |
* |
[Ref.: #20218] |
Lactobacillus buchneri ATCC 4005 16S ribosomal RNA gene, partial sequence |
AF429499 |
505 |
|
1581 tax ID |
* |
[Ref.: #20218] |
Lactobacillus buchneri strain ATCC 4005 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AF429586 |
545 |
|
1581 tax ID |
* |
[Ref.: #20218] |
Lactobacillus buchneri 16S-23S ribosomal RNA intergenic spacer, complete sequence |
AY821850 |
222 |
|
1581 tax ID |
* |
[Ref.: #20218] |
Lactobacillus buchneri gene for 16S ribosomal RNA, partial sequence |
D31682 |
196 |
|
1581 tax ID |
* |
[Ref.: #20218] |
Lactobacillus buchneri 16S ribosomal RNA |
M58811 |
1521 |
|
1581 tax ID |
* |
[Ref.: #20218] |
Lactobacillus buchneri gene for 16S ribosomal RNA, partial sequence |
AB205055 |
1542 |
|
1581 tax ID |
* |
[Ref.: #20218] |
Lactobacillus buchneri gene for 16S rRNA, partial sequence, strain: JCM 1115 |
AB289055 |
677 |
|
1581 tax ID |
* |
[Ref.: #20218] |
Lactobacillus buchneri strain LMG 6892 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence |
EU161616 |
806 |
|
1581 tax ID |
* |
[Ref.: #20218] |
L.buchneri 16S rRNA gene |
X61139 |
1382 |
|
1581 tax ID |
* |
[Ref.: #124043] |
Lactobacillus buchneri gene for 16S rRNA, partial sequence, strain: NBRC 107764. |
AB626077 |
1500 |
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1581 tax ID |
* |
|
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Availability in culture collections External links
[Ref.: #8488] |
Culture collection no. |
DSM 20057, ATCC 4005, CCM 1819, NCDO 110, NCIB 8007, CCUG 21532, JCM 1115, BCRC 14066, CECT 4111, CIP 103023, KCTC 3784, LMG 6892, NBRC 107764, NCFB 110, NCIMB 8007, NRIC 1040, NRRL B-1837, VKM B-1599, VTT E-93445, IMET 10692 |
[Ref.: #75897] |
SI-ID 264238
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* |
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Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
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Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Lactobacillus buchneri subsp. silagei subsp. nov., isolated from rice grain silage. |
Tanizawa Y, Kobayashi H, Nomura M, Sakamoto M, Arita M, Nakamura Y, Ohkuma M, Tohno M |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.004138 |
2020 |
* |
Genetics |
Comparative genomics of eight Lactobacillus buchneri strains isolated from food spoilage. |
Nethery MA, Henriksen ED, Daughtry KV, Johanningsmeier SD, Barrangou R |
BMC Genomics |
10.1186/s12864-019-6274-0 |
2019 |
* |
Enzymology |
Identification, purification, and characterization of a novel amino acid racemase, isoleucine 2-epimerase, from Lactobacillus species. |
Mutaguchi Y, Ohmori T, Wakamatsu T, Doi K, Ohshima T |
J Bacteriol |
10.1128/JB.00709-13 |
2013 |
* |
Pathogenicity |
Superoxide dismutase activity in some strains of lactobacilli: induction by manganese. |
Gonzalez SN, Apella MC, Romero N, Pesce de Ruiz Holgado AA, Oliver G |
Chem Pharm Bull (Tokyo) |
10.1248/cpb.37.3026 |
1989 |
* |
Phylogeny |
Comparative characterization of spirosomes isolated from Lactobacillus brevis, Lactobacillus fermentum, and Lactobacillus buchneri. |
Nomura S, Masuda K, Kawata T |
Microbiol Immunol |
10.1111/j.1348-0421.1989.tb01494.x |
1989 |
* |
Metabolism |
Arginine dihydrolase pathway in Lactobacillus buchneri: a review. |
Manca de Nadra MC, Pesce de Ruiz Holgado AA, Oliver G |
Biochimie |
10.1016/0300-9084(88)90209-x |
1988 |
* |
Enzymology |
Carbamate kinase of Lactobacillus buchneri NCDO110. II. Kinetic studies and reaction mechanism. |
Manca de Nadra MC, Pesce de Ruiz Holgado AA, Oliver G |
Biotechnol Appl Biochem |
|
1987 |
* |
Enzymology |
Carbamate kinase of Lactobacillus buchneri NCDO110. I. Purification and properties. |
Manca de Nadra MC, Nadra Chaud CA, Pesce de Ruiz Holgado A, Oliver G |
Biotechnol Appl Biochem |
|
1986 |
* |
|
A Novel PLP-Dependent Alanine/Serine Racemase From the Hyperthermophilic Archaeon Pyrococcus horikoshii OT-3. |
Kawakami R, Ohshida T, Sakuraba H, Ohshima T |
Front Microbiol |
10.3389/fmicb.2018.01481 |
2018 |
* |
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- References
-
#8488 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20057
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-
-
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#35472 |
; Curators of the CIP;
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-
#47424 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 21532
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-
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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-
#68371 |
Automatically annotated from API 50CH acid .
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#68382 |
Automatically annotated from API zym .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#75897 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID264238.1 )
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#117067 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 103023
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#124043 |
Dr. Isabel Schober, Dr. Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
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- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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