Terrabacter aeriphilus (DSM 18563, KACC 20693, 5414T-18)

Name: Terrabacter aeriphilus (DSM 18563, KACC 20693, 5414T-18)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6290

Type strain

Strain Designation 5414T-18

Culture col. no. DSM 18563 KACC 20693 5414T-18 NBRC 109777 KCTC 39581 1 more

NCBI tax ID(s) 515662

Special Collections DSMZ JCM KCTC Wink compendium Literature strains

History <- S.-W. Kwon <- H.-Y. Weon and S.-W. Kwon, KACC; 5414T-18 KACC 20693 <-- H.-Y. Weon 5414T-18.

Links

Terrabacter aeriphilus 5414T-18 is an aerobe, Gram-positive, ovoid-shaped bacterium that was isolated from air.

Gram-positive ovoid-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 403197

JCM 17687,NBRC 109777,DSM 18563

@ref 20215

Last LPSN update 2026-02-09 11:19:10

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Intrasporangiaceae

Genus Terrabacter

Species Terrabacter aeriphilus

Full scientific name Terrabacter aeriphilus Weon et al. 2010

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
29585	positive	1.75 µm	0.9 µm	ovoid-shaped

Colony morphology

@ref	Colony color	Incubation period	Medium used
21351	Maize yellow (1006)	10-14 days	ISP 2
21351	Maize yellow (1006)	10-14 days	ISP 3
21351	Signal yellow	10-14 days	ISP 4
21351	Lemon yellow (1012)	10-14 days	ISP 5
21351	Golden yellow (1004)	10-14 days	ISP 7

Pigmentation

29585

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
7591	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
21351	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
21351	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
21351	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
21351	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
21351	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
7591	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7591	positive	growth	28
29585	positive	growth	05-35
29585	positive	optimum	30
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
29585	positive	optimum	6.5
29585	positive	growth	04-09	alkaliphile

Physiology and metabolism

Oxygen tolerance

29585

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
21351	NaCl	positive	growth	0 %
29585	NaCl	positive	growth	0-7 %

Murein

@ref	Murein short key	Type
7591	A41.02	A3gamma LL-Dpm-Gly₃; alpha-carboxyl group of D-Glu substituted by Gly

Observation

67770

Observationquinones: MK-8(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29585	37054 ChEBI	3-hydroxybutyrate	+	carbon source
29585	17128 ChEBI	adipate	+	carbon source
29585	16449 ChEBI	alanine	+	carbon source
21351	22599 ChEBI	arabinose	-
21351	62968 ChEBI	cellulose	+
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
29585	4853 ChEBI	esculin	+	hydrolysis
21351	28757 ChEBI	fructose	+
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
21351	17234 ChEBI	glucose	+
29585	28087 ChEBI	glycogen	+	carbon source
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
29585	27570 ChEBI	histidine	+	carbon source
29585	24996 ChEBI	lactate	+	carbon source
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
29585	25115 ChEBI	malate	+	carbon source
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
29585	29864 ChEBI	mannitol	+	carbon source
21351	37684 ChEBI	mannose	+
29585	37684 ChEBI	mannose	+	carbon source
29585	28053 ChEBI	melibiose	+	carbon source
21351	17268 ChEBI	myo-inositol	+
29585	506227 ChEBI	N-acetylglucosamine	+	carbon source
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
29585	26271 ChEBI	proline	+	carbon source
29585	17272 ChEBI	propionate	+	carbon source
21351	16634 ChEBI	raffinose	+
21351	26546 ChEBI	rhamnose	+
21351	17992 ChEBI	sucrose	+
29585	17992 ChEBI	sucrose	+	carbon source
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne
29585	31011 ChEBI	valerate	+	carbon source
21351	18222 ChEBI	xylose	-

Enzymes

@ref	Value	Activity	Ec
29585	acid phosphatase	+	3.1.3.2
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
29585	alpha-galactosidase	+	3.2.1.22
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
29585	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
29585	cytochrome oxidase	+	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
29585	gelatinase	+
68379	gelatinase	-		from API Coryne
68382	lipase (C 14)	-		from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
68379	urease	+	3.5.1.5	from API Coryne
68382	valine arylamidase	-		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
21351	-	-	-	-	-	+	+	+/-	+/-	+	-	not determinedn.d.	-	-	-	-	-	-	+	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
21351	-	-	+	+	-	+/-	-	-	-	-	+	-	+	+	-	+	+/-	+/-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Environmental	#Air

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
7591	air	Taean region, Jeju	Republic of Korea	KOR	Asia
67770	Air sample in Jeju		Republic of Korea	KOR	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7591	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3954298v1 assembly for Terrabacter aeriphilus JCM 17687	contig	GCA_039542985	515662	71.67

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7591	Terrabacter aeriphilus strain 5414T-18 16S ribosomal RNA gene, partial sequence	EU573947	1397		515662

GC content

@ref	GC-content (mol%)	Method
7591	73	high performance liquid chromatography (HPLC)
29585	73

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Terrabacter aeriphilus sp. nov., isolated from an air sample.	Weon HY, Son JA, Yoo SH, Kim BY, Kwon SW, Schumann P, Kroppenstedt R, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.016444-0	2009

References

#7591	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18563
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21351	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#25977	IJSEM 1130 2010 ( DOI 10.1099/ijs.0.016444-0 , PubMed 19666794 )
#29585	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25977
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Terrabacter aeriphilus (DSM 18563, KACC 20693, 5414T-18)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Murein

Observation

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039542985

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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