Name: Terrabacter aeriphilus 5414T-18
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6290

Type strain:

Species: Terrabacter aeriphilus

Strain Designation: 5414T-18

Culture col. no.: DSM 18563, KACC 20693, JCM 17687, KCTC 39581, NBRC 109777

Strain history: KACC 20693 <-- H.-Y. Weon 5414T-18.

NCBI tax ID(s): 515662 (species)

SI-ID 403197

DSM 18563

Section

Terrabacter aeriphilus 5414T-18 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from air.

Gram-positive
ovoid-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Intrasporangiaceae*
	Genus	*Terrabacter*
	Species	**Terrabacter aeriphilus**
	Full Scientific Name (LPSN)	Terrabacter aeriphilus Weon et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #29585]	Gram stain	positive

[Ref.: #29585]	Cell length	1.75 µm

[Ref.: #29585]	Cell width	0.9 µm

[Ref.: #29585]	Cell shape	ovoid-shaped

[Ref.: #29585]	Motility	no

[Ref.: #21351]	Colony color	Maize yellow (1006)
[Ref.: #21351]	Incubation period	10-14 days
[Ref.: #21351]	Cultivation medium used	ISP 2

[Ref.: #21351]	Colony color	Maize yellow (1006)
[Ref.: #21351]	Incubation period	10-14 days
[Ref.: #21351]	Cultivation medium used	ISP 3

[Ref.: #21351]	Colony color	Signal yellow
[Ref.: #21351]	Incubation period	10-14 days
[Ref.: #21351]	Cultivation medium used	ISP 4

[Ref.: #21351]	Colony color	Lemon yellow (1012)
[Ref.: #21351]	Incubation period	10-14 days
[Ref.: #21351]	Cultivation medium used	ISP 5

[Ref.: #21351]	Colony color	Golden yellow (1004)
[Ref.: #21351]	Incubation period	10-14 days
[Ref.: #21351]	Cultivation medium used	ISP 7

[Ref.: #29585]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7591]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #7591]

Culture medium growth

[Ref.: #7591]

Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

[Ref.: #21351]

Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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[Ref.: #21351]

Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

expand / minimize

[Ref.: #21351]

Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

expand / minimize

[Ref.: #7591]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

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Culture medium growth

[Ref.: #7591]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7591]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #7591]	growth	28 °C
[Ref.: #29585]	growth	05-35 °C
[Ref.: #29585]	optimum	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #7591]	Temperature range	mesophilic
[Ref.: #29585]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29585]			optimum	6.5
[Ref.: #29585]			growth	04-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29585]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #21351]		NaCl		growth	0	%
[Ref.: #29585]		NaCl		growth	0-7	%

[Ref.: #7591]	Murein short key	A41.02
[Ref.: #7591]	Murein types	A3gamma LL-Dpm-Gly₃; alpha-carboxyl group of D-Glu substituted by Gly

[Ref.: #67770]

Observation

quinones: MK-8(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29585]	3-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #29585]	adipate ChEBI	+	carbon source
[Ref.: #29585]	alanine ChEBI	+	carbon source
[Ref.: #21351]	arabinose ChEBI	-
[Ref.: #21351]	cellulose ChEBI	+
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #29585]	esculin ChEBI	+	hydrolysis
[Ref.: #21351]	fructose ChEBI	+
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #21351]	glucose ChEBI	+
[Ref.: #29585]	glycogen ChEBI	+	carbon source
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #29585]	histidine ChEBI	+	carbon source
[Ref.: #29585]	lactate ChEBI	+	carbon source
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #29585]	malate ChEBI	+	carbon source
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #29585]	mannitol ChEBI	+	carbon source
[Ref.: #21351]	mannose ChEBI	+
[Ref.: #29585]	mannose ChEBI	+	carbon source
[Ref.: #29585]	melibiose ChEBI	+	carbon source
[Ref.: #21351]	myo-inositol ChEBI	+
[Ref.: #29585]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #29585]	proline ChEBI	+	carbon source
[Ref.: #29585]	propionate ChEBI	+	carbon source
[Ref.: #21351]	raffinose ChEBI	+
[Ref.: #21351]	rhamnose ChEBI	+
[Ref.: #21351]	sucrose ChEBI	+
[Ref.: #29585]	sucrose ChEBI	+	carbon source
[Ref.: #68379]	sucrose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #29585]	valerate ChEBI	+	carbon source
[Ref.: #21351]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #29585]	acid phosphatase	+	3.1.3.2
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #29585]	alpha-galactosidase	+	3.2.1.22
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API Coryne
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym, API Coryne
[Ref.: #29585]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #29585]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #29585]	gelatinase	+
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68379]	urease	+	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #21351]	480	-	-	-	-	-	+	+	+/-	+/-	+	-	not determinedn.d.	-	-	-	-	-	-	+	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #21351]	992	-	-	+	+	-	+/-	-	-	-	-	+	-	+	+	-	+	+/-	+/-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7591]	Sample type/isolated from	air
[Ref.: #7591]	Geographic location (country and/or sea, region)	Taean region, Jeju
[Ref.: #7591]	Country	Republic of Korea
[Ref.: #7591]	Country ISO 3 Code	KOR
[Ref.: #7591]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Air sample in Jeju
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Air

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7591]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7591]	Terrabacter aeriphilus strain 5414T-18 16S ribosomal RNA gene, partial sequence	EU573947	1397	ENA	515662 tax ID

[Ref.: #7591]	GC-content	73 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29585]	GC-content	73 mol%

Availability in culture collections External links

[Ref.: #7591]

Culture collection no.

DSM 18563, KACC 20693, JCM 17687, KCTC 39581, NBRC 109777

[Ref.: #75765]

SI-ID 403197

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Terrabacter aeriphilus sp. nov., isolated from an air sample.	Weon HY, Son JA, Yoo SH, Kim BY, Kwon SW, Schumann P, Kroppenstedt R, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.016444-0	2009	*

References

#7591

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18563

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21351

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#29585

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25977 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#75765

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403197.1 )

#25977

IJSEM 1130 2010 ( DOI 10.1099/ijs.0.016444-0 , PubMed 19666794 )

* These data were automatically processed and therefore are not curated

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