Name: Thiobacillus thioparus TK-m
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6146

Type strain:

Species: Thiobacillus thioparus

Strain Designation: TK-m

Culture col. no.: DSM 5368

Strain history: <- D.P. Kelly <- T. Kanagawa, TK-m (derived from strain TK-1)

NCBI tax ID(s): 931 (species)

SI-ID 47927

DSM 5368

Special Collections

DSMZ

Other strains from Thiobacillus thioparus

Section

Thiobacillus thioparus TK-m is a bacterium that was isolated from activated sludge.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Nitrosomonadales*
	Family	*Thiobacillaceae*
	Genus	*Thiobacillus*
	Species	**Thiobacillus thioparus**
	Full Scientific Name (LPSN)	Thiobacillus thioparus Beijerinck 1904 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #2007]

Incubation period

2-3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2007]

Culture medium

THIOBACILLUS THIOPARUS (TK-M) MEDIUM (DSMZ Medium 486)

[Ref.: #2007]

Culture medium growth

[Ref.: #2007]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2007]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2007]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2007]	Sample type/isolated from	activated sludge
[Ref.: #2007]	Country	Japan
[Ref.: #2007]	Country ISO 3 Code	JPN
[Ref.: #2007]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Activated sludge

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence GU967681 (>99% sequence identity) for Thiobacillus thioparus from Microbeatlas

Aquatic Samples	45
Soil Samples	14
Animal Samples	1
Plant Samples	2
Total Samples	62

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2007]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2007]	Thiobacillus thioparus strain Tk-m 16S ribosomal RNA gene, partial sequence	GU967681	1387	GenBank ENA	931 tax ID

Availability in culture collections External links

[Ref.: #2007]

Culture collection no.

DSM 5368

[Ref.: #75633]

SI-ID 47927

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Dimethyl sulfide biofiltration using immobilized Hyphomicrobium VS and Thiobacillus thioparus TK-m in sugarcane bagasse.	Treto Fernandez H, Rodriguez Rico I, Jover de la Prida J, Van Langenhove H	Environ Technol	10.1080/09593330.2012.692713	2013	*
Metabolism	Performance and microbial analysis of defined and non-defined inocula for the removal of dimethyl sulfide in a biotrickling filter.	Sercu B, Boon N, Beken SV, Verstraete W, Van Langenhove H	Biotechnol Bioeng	10.1002/bit.21059	2007	*
Metabolism	Removal of methanethiol, dimethyl sulfide, dimethyl disulfide, and hydrogen sulfide from contaminated air by Thiobacillus thioparus TK-m.	Kanagawa T, Mikami E	Appl Environ Microbiol	10.1128/aem.55.3.555-558.1989	1989	*

References

#2007

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5368

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75633

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47927.1 )

* These data were automatically processed and therefore are not curated

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