[Ref.: #24474] |
Sample type/isolated from |
soil and industrial amylase fermentations |
|
[Ref.: #49266] |
Sample type/isolated from |
Soil |
|
[Ref.: #2015] |
Sample type/isolated from |
soil |
|
[Ref.: #116352] |
Sample type/isolated from |
Environment, Soil |
* marker position based on {}
|
|
Isolation sources categories |
#Engineered |
#Industrial |
#Industrial production |
#Environmental |
#Terrestrial |
#Soil |
|
 |
-
Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #2015] |
Bacillus amyloliquefaciens gene for 16S rRNA, partial sequence |
AB006920 |
274 |
|
692420 tax ID |
[Ref.: #20218] |
Bacillus amyloliquefaciens strain DSM7 (F) 16S ribosomal RNA gene, partial sequence |
AY055225 |
500 |
|
692420 tax ID |
* |
[Ref.: #20218] |
Bacillus amyloliquefaciens strain MPA 1034 16S ribosomal RNA gene, partial sequence |
HQ231913 |
1448 |
|
1390 tax ID |
* |
[Ref.: #20218] |
B.amyloliquefaciens 16S ribosomal RNA |
X60605 |
1427 |
|
692420 tax ID |
* |
[Ref.: #20218] |
Bacillus amyloliquefaciens clone BamyloDH3R 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AF478077 |
408 |
|
692420 tax ID |
* |
[Ref.: #20218] |
Bacillus amyloliquefaciens clone DH-19 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AF478078 |
466 |
|
692420 tax ID |
* |
[Ref.: #20218] |
Bacillus amyloliquefaciens clone DH-11-1 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AF478079 |
584 |
|
692420 tax ID |
* |
|
|
Genome sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Bacillus amyloliquefaciens DSM 7 = ATCC 23350 |
GCA_000196735 |
complete |
|
692420 tax ID |
* |
|
|
-
Availability in culture collections
External links
[Ref.: #2015] |
Culture collection no. |
DSM 7, ATCC 23350, CCUG 28519, NRRL B-14393, Fukumoto strain F, CIP 103265, LMG 9814, NRRL : B-14393 |
[Ref.: #70275] |
SI-ID 1093
|
* |
 |
Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Metabolism |
Comparative Genome Analysis Reveals Phylogenetic Identity of Bacillus velezensis HNA3 and Genomic Insights into Its Plant Growth Promotion and Biocontrol Effects. |
Zaid DS, Cai S, Hu C, Li Z, Li Y |
Microbiol Spectr |
10.1128/spectrum.02169-21 |
2022 |
* |
Cultivation |
Control Efficacy of Bacillus velezensis AFB2-2 against Potato Late Blight Caused by Phytophthora infestans in Organic Potato Cultivation. |
Kim MJ, Shim CK, Park JH |
Plant Pathol J |
10.5423/PPJ.FT.09.2021.0138 |
2021 |
* |
Cultivation |
Triaging of Culture Conditions for Enhanced Secondary Metabolite Diversity from Different Bacteria. |
Schwarz J, Hubmann G, Rosenthal K, Lutz S |
Biomolecules |
10.3390/biom11020193 |
2021 |
* |
Genetics |
Complete Genome of Bacillus velezensis CMT-6 and Comparative Genome Analysis Reveals Lipopeptide Diversity. |
Deng Q, Wang R, Sun D, Sun L, Wang Y, Pu Y, Fang Z, Xu D, Liu Y, Ye R, Yin S, Xie S, Gooneratne R |
Biochem Genet |
10.1007/s10528-019-09927-z |
2019 |
* |
Genetics |
Genome and transcriptome analysis of surfactin biosynthesis in Bacillus amyloliquefaciens MT45. |
Zhi Y, Wu Q, Xu Y |
Sci Rep |
10.1038/srep40976 |
2017 |
* |
Enzymology |
Characterization of a Mannose-6-Phosphate Isomerase from Bacillus amyloliquefaciens and Its Application in Fructose-6-Phosphate Production. |
Sigdel S, Singh R, Kim TS, Li J, Kim SY, Kim IW, Jung WS, Pan CH, Kang YC, Lee JK |
PLoS One |
10.1371/journal.pone.0131585 |
2015 |
* |
Genetics |
Complete genome sequence of Bacillus amyloliquefaciens TA208, a strain for industrial production of guanosine and ribavirin. |
Zhang G, Deng A, Xu Q, Liang Y, Chen N, Wen T |
J Bacteriol |
10.1128/JB.00440-11 |
2011 |
* |
Genetics |
Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42. |
Ruckert C, Blom J, Chen X, Reva O, Borriss R |
J Biotechnol |
10.1016/j.jbiotec.2011.01.006 |
2011 |
* |
Phylogeny |
Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons. |
Borriss R, Chen XH, Rueckert C, Blom J, Becker A, Baumgarth B, Fan B, Pukall R, Schumann P, Sproer C, Junge H, Vater J, Puhler A, Klenk HP |
Int J Syst Evol Microbiol |
10.1099/ijs.0.023267-0 |
2010 |
* |
Metabolism |
Phytate utilization by genetically engineered lysine-producing Corynebacterium glutamicum. |
Tzvetkov MV, Liebl W |
J Biotechnol |
10.1016/j.jbiotec.2008.02.005 |
2008 |
* |
Biotechnology |
Cell growth and alpha-amylase production characteristics of Bacillus amyloliquefaciens. |
Roychoudhury S, Parulekar SJ, Weigand WA |
Biotechnol Bioeng |
10.1002/bit.260330209 |
1989 |
* |
Phylogeny |
Bacteriophage SPO2-mediated plasmid transduction in transpositional mutagenesis within the genus Bacillus. |
Kopec LK, Yasbin RE, Marrero R |
J Bacteriol |
10.1128/jb.164.3.1283-1287.1985 |
1985 |
* |
|
Bacillus amyloliquefaciens, Bacillus velezensis, and Bacillus siamensis Form an "Operational Group B. amyloliquefaciens" within the B. subtilis Species Complex. |
Fan B, Blom J, Klenk HP, Borriss R |
Front Microbiol |
10.3389/fmicb.2017.00022 |
2017 |
* |
|
References
-
#2015 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 7
|
-
-
-
-
#35323 |
; Curators of the CIP;
|
-
#49266 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 28519
|
-
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
#70275 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID1093.1 )
|
-
#116352 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 103265
|
-
-
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
|
|