Name: Bacillus amyloliquefaciens F
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 598

Type strain:

Species: Bacillus amyloliquefaciens

Strain Designation: F

Culture col. no.: DSM 7, ATCC 23350, CCUG 28519, NRRL B-14393, Fukumoto strain F, CIP 103265, LMG 9814, NRRL : B-14393

Strain history: CIP <- 1988, DSMZ <- ATCC <- L.L. Campbell: strain F <- J. Fukumoto, Bacillus subtilis

NCBI tax ID(s): 692420 (strain), 1390 (species)

SI-ID 1093

LMG 9814, ATCC 23350, CIP 103265, DSM 7, IFO 15535, LMG 12234, NCIMB 12077, NRRL B-14393, VTT E-80124, CCUG 28519, KCTC 1660, NCCB 91058, LMD 91.58, NBRC 15535, CFBP 4246, HAMBI 1824, NCAIM B.01704, BCRC 11601, CCRC 11601, CCMM B601

Special Collections

Other strains from Bacillus amyloliquefaciens

Section

When using BacDive for research please cite our paper

Bacillus amyloliquefaciens F is an obligate aerobe, spore-forming, Gram-positive bacterium that produces antibiotic compounds and was isolated from soil and industrial amylase fermentations.

antibiotic compound production
Gram-positive
motile
rod-shaped
spore-forming
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Bacillus*
	Species	**Bacillus amyloliquefaciens**
	Full Scientific Name (LPSN)	Bacillus amyloliquefaciens (ex Fukomoto 1943) Priest et al. 1987

Information on morphological and physiological properties Morphology

[Ref.: #24474]	Gram stain	positive
[Ref.: #116352]	Gram stain	positive

[Ref.: #24474]	Cell length	1.8-3.0 µm

[Ref.: #24474]	Cell width	0.7-0.9 µm

[Ref.: #24474]	Cell shape	rod-shaped
[Ref.: #116352]	Cell shape	rod-shaped

[Ref.: #24474]	Motility	yes
[Ref.: #116352]	Motility	no

[Ref.: #24474]	Flagellum arrangement	peritrichous

[Ref.: #24474]

Cultivation medium used

medium of Gordon et al.

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24474]

Culture medium

medium of Gordon et al.

[Ref.: #24474]

Culture medium growth

[Ref.: #35323]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #35323]

Culture medium growth

[Ref.: #35323]

Culture medium composition

expand / minimize

[Ref.: #2015]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #2015]

Culture medium growth

[Ref.: #2015]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2015]

Culture medium composition

expand / minimize

[Ref.: #116352]

Culture medium

CIP Medium 72

[Ref.: #116352]

Culture medium growth

[Ref.: #116352]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #116352]

Culture medium

CIP Medium 3

[Ref.: #116352]

Culture medium growth

[Ref.: #116352]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #2015]		growth	30 °C
[Ref.: #24474]	no	growth	<15 °C
[Ref.: #24474]	no	growth	>50 °C
[Ref.: #24474]		optimum	30-40 °C
[Ref.: #35323]		growth	30 °C
[Ref.: #116352]		growth	30-45 °C
[Ref.: #116352]	no	growth	10 °C
[Ref.: #116352]	no	growth	55 °C

	pH	Kind of pH		pH
[Ref.: #116352]			growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #116352]

Oxygen tolerance

obligate aerobe

[Ref.: #24474]	Spore description	central or paracentral
[Ref.: #24474]	Type of spore	spore
[Ref.: #24474]	Ability of spore formation	yes
[Ref.: #125438]	Ability of spore formation	yes Confidence in %96.108

[Ref.: #2015]	Name of produced compound	alpha amylase
[Ref.: #2015]	Name of produced compound	1-deoxynojirimycin
[Ref.: #2015]	Name of produced compound	inhibitors for glycoside hydrolases
[Ref.: #2015]	Name of produced compound	restriction endonuclease BamFI (BamHI)
[Ref.: #24474]	Name of produced compound	Acetoin

	Salt	Tested relation		Salt conc.
[Ref.: #24474]	NaCl		growth	5	%(w/v)
[Ref.: #24474]	NaCl		growth	10	%
[Ref.: #116352]	NaCl		growth	0-6	%
[Ref.: #116352]	NaCl	no	growth	8	%
[Ref.: #116352]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #24474]	acetoin ChEBI	+	other
[Ref.: #24474]	adenine ChEBI	-	other
[Ref.: #24474]	adenine ChEBI	-	degradation
[Ref.: #24474]	allantoin ChEBI	-	hydrolysis
[Ref.: #24474]	alpha-D-glucose ChEBI	+	builds acid from
[Ref.: #24474]	alpha-lactose ChEBI	+	builds acid from
[Ref.: #24474]	arbutin ChEBI	+	hydrolysis
[Ref.: #24474]	carboxymethylcellulose ChEBI	-	degradation
[Ref.: #24474]	casein	+	other
[Ref.: #24474]	casein	+	degradation
[Ref.: #24474]	cellobiose ChEBI	+	builds acid from
[Ref.: #24474]	cellulose ChEBI	-	other
[Ref.: #24474]	citrate ChEBI	+	growth
[Ref.: #24474]	citrate ChEBI	+	carbon source
[Ref.: #116352]	citrate ChEBI	-	carbon source
[Ref.: #24474]	dna ChEBI	+/-	degradation
[Ref.: #24474]	elastin ChEBI	+	other
[Ref.: #24474]	elastin ChEBI	+	degradation
[Ref.: #24474]	esculin ChEBI	+	hydrolysis
[Ref.: #24474]	fructose ChEBI	+	builds acid from
[Ref.: #24474]	gelatin ChEBI	+	other
[Ref.: #24474]	glucose ChEBI	+	builds acid from
[Ref.: #24474]	glycerol ChEBI	+	builds acid from
[Ref.: #24474]	guanine ChEBI	-	other
[Ref.: #24474]	guanine ChEBI	-	degradation
[Ref.: #24474]	hypoxanthine ChEBI	-	other
[Ref.: #24474]	hypoxanthine ChEBI	-	degradation
[Ref.: #24474]	lactose ChEBI	+	builds acid from
[Ref.: #24474]	maltose ChEBI	+	builds acid from
[Ref.: #24474]	mannitol ChEBI	+	builds acid from
[Ref.: #24474]	mannose ChEBI	+	builds acid from
[Ref.: #24474]	nitrate ChEBI	+	reduction
[Ref.: #116352]	nitrate ChEBI	-	reduction
[Ref.: #116352]	nitrate ChEBI	-	respiration
[Ref.: #116352]	nitrite ChEBI	-	reduction
[Ref.: #24474]	pectin ChEBI	-	degradation
[Ref.: #24474]	raffinose ChEBI	+	builds acid from
[Ref.: #24474]	salicin ChEBI	+	builds acid from
[Ref.: #24474]	sorbitol ChEBI	+	builds acid from
[Ref.: #24474]	starch ChEBI	+	other
[Ref.: #24474]	starch ChEBI	+	degradation
[Ref.: #24474]	sucrose ChEBI	+	builds acid from
[Ref.: #24474]	testosterone ChEBI	-	other
[Ref.: #24474]	testosterone ChEBI	-	degradation
[Ref.: #24474]	trehalose ChEBI	+	builds acid from
[Ref.: #24474]	tributyrin ChEBI	+	other
[Ref.: #24474]	tributyrin ChEBI	+	degradation
[Ref.: #24474]	tween 20 ChEBI	+	other
[Ref.: #24474]	tween 20 ChEBI	+	degradation
[Ref.: #24474]	tween 40 ChEBI	+	other
[Ref.: #24474]	tween 40 ChEBI	+	degradation
[Ref.: #24474]	tween 60 ChEBI	+	other
[Ref.: #24474]	tween 60 ChEBI	+	degradation
[Ref.: #24474]	tyrosine ChEBI	-	other
[Ref.: #24474]	tyrosine ChEBI	-	degradation
[Ref.: #24474]	urea ChEBI	-	other
[Ref.: #24474]	urea ChEBI	-	hydrolysis
[Ref.: #24474]	xanthine ChEBI	-	other
[Ref.: #24474]	xanthine ChEBI	-	degradation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #24474]		acetoin ChEBI	yes
[Ref.: #116352]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #24474]		acetoin ChEBI	+
[Ref.: #116352]		acetoin ChEBI	+

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116352]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #116352]	amylase	-
[Ref.: #24474]	arginine dihydrolase	-	3.5.3.6
[Ref.: #116352]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116352]	caseinase	-	3.4.21.50
[Ref.: #116352]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #116352]	gelatinase	-
[Ref.: #116352]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116352]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116352]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #116352]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #116352]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #116352]	374	not determinedn.d.	+	+	+	+	+	-	+	+	+	+	+	+	-	-	+	+	+	+	+	+	-	-	+	-	-	-	-	-	-	-	-	+	-	+	+	+	+	-	-	-	-	+	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	+	+	+	-	-	-	-	-	+	-	-	+	+	+	+	+	+	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116352]	7471	-	+	+	+	-	-	-	-	-	-	+	+	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24474]	Sample type/isolated from	soil and industrial amylase fermentations

[Ref.: #49266]	Sample type/isolated from	Soil

[Ref.: #2015]	Sample type/isolated from	soil

[Ref.: #116352]	Sample type/isolated from	Environment, Soil
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	#Industrial production
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ231913 (>99% sequence identity) for Bacillus from Microbeatlas

Aquatic Samples	2854
Soil Samples	3768
Animal Samples	9674
Plant Samples	1905
Total Samples	18201

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2015]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116352]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2015]	Bacillus amyloliquefaciens gene for 16S rRNA, partial sequence	AB006920	274	GenBank ENA	692420 tax ID
[Ref.: #20218]	Bacillus amyloliquefaciens strain DSM7 (F) 16S ribosomal RNA gene, partial sequence	AY055225	500	GenBank ENA	692420 tax ID	*
[Ref.: #20218]	Bacillus amyloliquefaciens strain MPA 1034 16S ribosomal RNA gene, partial sequence	HQ231913	1448	GenBank ENA	1390 tax ID	*
[Ref.: #20218]	B.amyloliquefaciens 16S ribosomal RNA	X60605	1427	GenBank ENA	692420 tax ID	*
[Ref.: #20218]	Bacillus amyloliquefaciens clone BamyloDH3R 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF478077	408	GenBank ENA	692420 tax ID	*
[Ref.: #20218]	Bacillus amyloliquefaciens clone DH-19 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF478078	466	GenBank ENA	692420 tax ID	*
[Ref.: #20218]	Bacillus amyloliquefaciens clone DH-11-1 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF478079	584	GenBank ENA	692420 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacillus amyloliquefaciens DSM 7 = ATCC 23350	GCA_000196735	complete	GenBank ENA	692420 tax ID	*

[Ref.: #24474]	GC-content	44.6 mol%
[Ref.: #2015]	GC-content	46.2 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #2015]	GC-content	44.5 mol%	Buoyant density centrifugation (BD)

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacillus amyloliquefaciens DSM 7 = ATCC 23350 DSM 7 NCBI: GCA_000196735.1
[Ref.: #125438]	gram-positive	gram-positiveⓘ	yes	81.413	yes
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	90.953	yes
[Ref.: #125438]	aerobic	aerobicⓘ	yes	75.362	yes
[Ref.: #125438]	spore-forming	spore-formingⓘ	yes	96.108	yes
[Ref.: #125438]	thermophile	thermophilicⓘ	no	93.333	yes
[Ref.: #125438]	motile2+	flagellatedⓘ	yes	87.322	no

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bacillus amyloliquefaciens DSM 7 = ATCC 23350 NCBI: GCA_000196735
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	yes	62.9
[Ref.: #125439]	BacteriaNet	motilityⓘ	yes	61.8
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	variable	78.9
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	facultative anaerobe	63.9

Availability in culture collections External links

[Ref.: #2015]

Culture collection no.

DSM 7, ATCC 23350, CCUG 28519, NRRL B-14393, Fukumoto strain F, CIP 103265, LMG 9814, NRRL : B-14393

[Ref.: #70275]

SI-ID 1093

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Comparative Genome Analysis Reveals Phylogenetic Identity of Bacillus velezensis HNA3 and Genomic Insights into Its Plant Growth Promotion and Biocontrol Effects.	Zaid DS, Cai S, Hu C, Li Z, Li Y	Microbiol Spectr	10.1128/spectrum.02169-21	2022	*
Cultivation	Control Efficacy of Bacillus velezensis AFB2-2 against Potato Late Blight Caused by Phytophthora infestans in Organic Potato Cultivation.	Kim MJ, Shim CK, Park JH	Plant Pathol J	10.5423/PPJ.FT.09.2021.0138	2021	*
Cultivation	Triaging of Culture Conditions for Enhanced Secondary Metabolite Diversity from Different Bacteria.	Schwarz J, Hubmann G, Rosenthal K, Lutz S	Biomolecules	10.3390/biom11020193	2021	*
Genetics	Complete Genome of Bacillus velezensis CMT-6 and Comparative Genome Analysis Reveals Lipopeptide Diversity.	Deng Q, Wang R, Sun D, Sun L, Wang Y, Pu Y, Fang Z, Xu D, Liu Y, Ye R, Yin S, Xie S, Gooneratne R	Biochem Genet	10.1007/s10528-019-09927-z	2019	*
Genetics	Genome and transcriptome analysis of surfactin biosynthesis in Bacillus amyloliquefaciens MT45.	Zhi Y, Wu Q, Xu Y	Sci Rep	10.1038/srep40976	2017	*
Enzymology	Characterization of a Mannose-6-Phosphate Isomerase from Bacillus amyloliquefaciens and Its Application in Fructose-6-Phosphate Production.	Sigdel S, Singh R, Kim TS, Li J, Kim SY, Kim IW, Jung WS, Pan CH, Kang YC, Lee JK	PLoS One	10.1371/journal.pone.0131585	2015	*
Genetics	Complete genome sequence of Bacillus amyloliquefaciens TA208, a strain for industrial production of guanosine and ribavirin.	Zhang G, Deng A, Xu Q, Liang Y, Chen N, Wen T	J Bacteriol	10.1128/JB.00440-11	2011	*
Genetics	Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42.	Ruckert C, Blom J, Chen X, Reva O, Borriss R	J Biotechnol	10.1016/j.jbiotec.2011.01.006	2011	*
Phylogeny	Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons.	Borriss R, Chen XH, Rueckert C, Blom J, Becker A, Baumgarth B, Fan B, Pukall R, Schumann P, Sproer C, Junge H, Vater J, Puhler A, Klenk HP	Int J Syst Evol Microbiol	10.1099/ijs.0.023267-0	2010	*
Metabolism	Phytate utilization by genetically engineered lysine-producing Corynebacterium glutamicum.	Tzvetkov MV, Liebl W	J Biotechnol	10.1016/j.jbiotec.2008.02.005	2008	*
Biotechnology	Cell growth and alpha-amylase production characteristics of Bacillus amyloliquefaciens.	Roychoudhury S, Parulekar SJ, Weigand WA	Biotechnol Bioeng	10.1002/bit.260330209	1989	*
Phylogeny	Bacteriophage SPO2-mediated plasmid transduction in transpositional mutagenesis within the genus Bacillus.	Kopec LK, Yasbin RE, Marrero R	J Bacteriol	10.1128/jb.164.3.1283-1287.1985	1985	*
	Bacillus amyloliquefaciens, Bacillus velezensis, and Bacillus siamensis Form an "Operational Group B. amyloliquefaciens" within the B. subtilis Species Complex.	Fan B, Blom J, Klenk HP, Borriss R	Front Microbiol	10.3389/fmicb.2017.00022	2017	*

References

#2015

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#24474

F. G. Priest, M. Goodfellow, L. A. Shute, R. C. W. Berkeley: Bacillus amyloliquefaciens sp. nov., nom. rev.. IJSEM 37: 69 - 71 1987 ( DOI 10.1099/00207713-37-1-69 )

#35323 ; Curators of the CIP;
#49266 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28519

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#70275

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID1093.1 )

#116352 Collection of Institut Pasteur ; Curators of the CIP; CIP 103265

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Bacillus amyloliquefaciens in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Bacillus amyloliquefaciens DSM 7 = ATCC 23350 DSM 7

Bacillus amyloliquefaciens DSM 7 = ATCC 23350

Change proposal

Change proposal