Bacillus amyloliquefaciens (DSM 7, ATCC 23350, CCUG 28519)

Name: Bacillus amyloliquefaciens (DSM 7, ATCC 23350, CCUG 28519)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 598

Type strain

Strain Designation F

Culture col. no. DSM 7 ATCC 23350 CCUG 28519 NRRL B-14393 F 4 more

NCBI tax ID(s) 692420 1390

Special Collections DSMZ CCUG Literature strains CIP

History <- ATCC <- L.L. Campbell, F (Bacillus subtilis) CIP <- 1988, DSMZ <- ATCC <- L.L. Campbell: strain F <- J. Fukumoto, Bacillus subtilis

Links

Bacillus amyloliquefaciens F is an obligate aerobe, spore-forming, Gram-positive bacterium that produces antibiotic compounds and was isolated from soil and industrial amylase fermentations.

antibiotic compound production spore-forming Gram-positive motile rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 1093

LMG 9814,ATCC 23350,CIP 103265,DSM 7,IFO 15535,LMG 12234,NCIMB 12077,NRRL B-14393,VTT E-80124,CCUG 28519,KCTC 1660,NCCB 91058,LMD 91.58,NBRC 15535,CFBP 4246,HAMBI 1824,NCAIM B.01704,BCRC 11601,CCRC 11601,CCMM B601

@ref 20215

Last LPSN update 2026-02-09 11:17:54

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Bacillus

Species Bacillus amyloliquefaciens

Full scientific name Bacillus amyloliquefaciens (ex Fukomoto 1943) Priest et al. 1987

BacDive ID	Other strains from **Bacillus amyloliquefaciens** (21)	Type strain
590	B. amyloliquefaciens KA 63, DSM 1060
591	B. amyloliquefaciens K, DSM 1061, IAM 1523, JCM 20197
592	B. amyloliquefaciens DSM 1062, IFO 3034, NBRC 3034, OUT 8108, ...
593	B. amyloliquefaciens DSM 1063, IFO 3037, NBRC 3037, OUT 8110, ...
594	B. amyloliquefaciens S 202, DSM 1064, OUT 8419
595	B. amyloliquefaciens S 204, DSM 1065, OUT 8420
596	B. amyloliquefaciens S219, DSM 1066, OUT 8421
597	B. amyloliquefaciens 8426, S242, DSM 1067, OUT 8426
139242	B. amyloliquefaciens CIP 104911, ATCC 9799, NCTC 6276, NCIMB 6276
145819	B. amyloliquefaciens CCUG 29690 B
146967	B. amyloliquefaciens CCUG 32562
147051	B. amyloliquefaciens CCUG 32744
147052	B. amyloliquefaciens CCUG 32745
147532	B. amyloliquefaciens CCUG 33754
148350	B. amyloliquefaciens CCUG 35269
148433	B. amyloliquefaciens CCUG 35441
149420	B. amyloliquefaciens CCUG 37700 A
149590	B. amyloliquefaciens CCUG 38022
159924	B. amyloliquefaciens Bak15a SBUG 1718, SBUG 1837, DSM 100597
162806	B. amyloliquefaciens JCM 20195, IAM 1521
162807	B. amyloliquefaciens JCM 20196, IAM 1522

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Flagellum arrangement
24474	positive	1.8-3.0 µm	0.7-0.9 µm	rod-shaped		peritrichous
116352	positive			rod-shaped

Colony morphology

24474

Medium usedmedium of Gordon et al.

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
24474	medium of Gordon et al.
35323	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
2015	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
116352	CIP Medium 72	Medium recipe at CIP
116352	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
2015	positive	growth	30
24474	negative	growth	<15
24474	negative	growth	>50
24474	positive	optimum	30-40
35323	positive	growth	30
116352	positive	growth	30-45
116352	negative	growth	10
116352	negative	growth	55

Culture pH

@ref	Ability	Type	PH
116352	positive	growth	6

Physiology and metabolism

Oxygen tolerance

116352

Oxygen toleranceobligate aerobe

Spore formation

@ref	Spore description	Type of spore	Spore formation	Confidence
24474	central or paracentral	spore
125438				96.108

Compound production

@ref	Compound
2015	alpha amylase
2015	1-deoxynojirimycin
2015	inhibitors for glycoside hydrolases
2015	restriction endonuclease BamFI (BamHI)
24474	Acetoin

Halophily

@ref	Salt	Growth	Tested relation	Concentration
24474	NaCl	positive	growth	5 %(w/v)
24474	NaCl	positive	growth	10 %
116352	NaCl	positive	growth	0-6 %
116352	NaCl		growth	8 %
116352	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
24474	15688 ChEBI	acetoin	+	other
24474	16708 ChEBI	adenine	-	other
24474	16708 ChEBI	adenine	-	degradation
24474	15676 ChEBI	allantoin	-	hydrolysis
24474	17925 ChEBI	alpha-D-glucose	+	builds acid from
24474	36219 ChEBI	alpha-lactose	+	builds acid from
24474	18305 ChEBI	arbutin	+	hydrolysis
24474	85146 ChEBI	carboxymethylcellulose	-	degradation
24474		casein	+	other
24474		casein	+	degradation
24474	17057 ChEBI	cellobiose	+	builds acid from
24474	62968 ChEBI	cellulose	-	other
24474	16947 ChEBI	citrate	+	growth
24474	16947 ChEBI	citrate	+	carbon source
116352	16947 ChEBI	citrate	-	carbon source
24474	16991 ChEBI	dna	+/-	degradation
24474	4767 ChEBI	elastin	+	other
24474	4767 ChEBI	elastin	+	degradation
24474	4853 ChEBI	esculin	+	hydrolysis
24474	28757 ChEBI	fructose	+	builds acid from
24474	5291 ChEBI	gelatin	+	other
24474	17234 ChEBI	glucose	+	builds acid from
24474	17754 ChEBI	glycerol	+	builds acid from
24474	16235 ChEBI	guanine	-	other
24474	16235 ChEBI	guanine	-	degradation
24474	17368 ChEBI	hypoxanthine	-	other
24474	17368 ChEBI	hypoxanthine	-	degradation
24474	17716 ChEBI	lactose	+	builds acid from
24474	17306 ChEBI	maltose	+	builds acid from
24474	29864 ChEBI	mannitol	+	builds acid from
24474	37684 ChEBI	mannose	+	builds acid from
24474	17632 ChEBI	nitrate	+	reduction
116352	17632 ChEBI	nitrate	-	reduction
116352	17632 ChEBI	nitrate	-	respiration
116352	16301 ChEBI	nitrite	-	reduction
24474	17309 ChEBI	pectin	-	degradation
24474	16634 ChEBI	raffinose	+	builds acid from
24474	17814 ChEBI	salicin	+	builds acid from
24474	30911 ChEBI	sorbitol	+	builds acid from
24474	28017 ChEBI	starch	+	other
24474	28017 ChEBI	starch	+	degradation
24474	17992 ChEBI	sucrose	+	builds acid from
24474	17347 ChEBI	testosterone	-	other
24474	17347 ChEBI	testosterone	-	degradation
24474	27082 ChEBI	trehalose	+	builds acid from
24474	35020 ChEBI	tributyrin	+	other
24474	35020 ChEBI	tributyrin	+	degradation
24474	53424 ChEBI	tween 20	+	other
24474	53424 ChEBI	tween 20	+	degradation
24474	53423 ChEBI	tween 40	+	other
24474	53423 ChEBI	tween 40	+	degradation
24474	53425 ChEBI	tween 60	+	other
24474	53425 ChEBI	tween 60	+	degradation
24474	18186 ChEBI	tyrosine	-	other
24474	18186 ChEBI	tyrosine	-	degradation
24474	16199 ChEBI	urea	-	other
24474	16199 ChEBI	urea	-	hydrolysis
24474	15318 ChEBI	xanthine	-	other
24474	15318 ChEBI	xanthine	-	degradation

Metabolite production

@ref	Chebi-ID	Metabolite	Production
24474	15688 ChEBI	acetoin
116352	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
24474	15688 ChEBI	acetoin	+
116352	15688 ChEBI	acetoin	+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116352	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116352	amylase	-
24474	arginine dihydrolase	-	3.5.3.6
68382	beta-galactosidase	-	3.2.1.23	from API zym
116352	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116352	caseinase	-	3.4.21.50
116352	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116352	gelatinase	-
116352	lecithinase	+
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
116352	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116352	ornithine decarboxylase	-	4.1.1.17
116352	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
116352	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116352	-	+	+	+	-	-	-	-	-	-	+	+	-	-	-	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116352	not determinedn.d.	+	+	+	+	+	-	+	+	+	+	+	+	-	-	+	+	+	+	+	+	-	-	+	-	-	-	-	-	-	-	-	+	-	+	+	+	+	-	-	-	-	+	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	+	+	+	-	-	-	-	-	+	-	-	+	+	+	+	+	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Industrial production
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type
24474	soil and industrial amylase fermentations
49266	Soil
2015	soil
116352	Environment, Soil

Taxonmaps

69479

Global distribution of 16S sequence HQ231913 (>99% sequence identity) for Bacillus from Microbeatlas

Aquatic Samples	2854
Soil Samples	3768
Animal Samples	9674
Plant Samples	1905
Total Samples	18201

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2015	1	Risk group (German classification) According to TRBA 466
116352	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM19673v1 assembly for Bacillus amyloliquefaciens DSM 7 = ATCC 23350	complete	GCA_000196735	692420.6	649633008	692420	97.73
124043	ASM5047368v1 assembly for Bacillus amyloliquefaciens NRRL B-14393	contig	GCA_050473685			1390	68.81

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Bacillus amyloliquefaciens strain DSM7 (F) 16S ribosomal RNA gene, partial sequence	AY055225	500	692420
20218	Bacillus amyloliquefaciens strain MPA 1034 16S ribosomal RNA gene, partial sequence	HQ231913	1448	1390
20218	B.amyloliquefaciens 16S ribosomal RNA	X60605	1427	692420
2015	Bacillus amyloliquefaciens gene for 16S rRNA, partial sequence	AB006920	274	692420
124043	Bacillus amyloliquefaciens strain DSM 7 (T) 16S ribosomal RNA gene, partial sequence.	KY047618	640	1390

GC content

@ref	GC-content (mol%)	Method
24474	44.6
2015	46.2	thermal denaturation, midpoint method (Tm)
2015	44.5	Buoyant density centrifugation (BD)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bacillus amyloliquefaciens DSM 7 = ATCC 23350
NCBI: GCA_000196735

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	62.90	no
125439	motility	BacteriaNetⓘ	yes	61.80	no
125439	gram_stain	BacteriaNetⓘ	variable	78.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	63.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacillus amyloliquefaciens DSM 7 = ATCC 23350 DSM 7
NCBI: GCA_000196735.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	81.41	yes
125438	anaerobic	anaerobicⓘ	no	90.95	yes
125438	aerobic	aerobicⓘ	yes	75.36	yes
125438	spore-forming	spore-formingⓘ	yes	96.11	yes
125438	thermophilic	thermophileⓘ	no	93.33	yes
125438	flagellated	motile2+ⓘ	yes	87.32	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Mining the nanotube-forming Bacillus amyloliquefaciens MR14M3 genome for determining anti-Candida auris and anti-Candida albicans potential by pathogenicity and comparative genomics analysis.	Borgio JF, Alhujaily R, Alquwaie R, Alabdullah MJ, AlHasani E, Alothman W, Alaqeel RK, Alfaraj AS, Kaabi A, Alhur NF, Akhtar S, AlJindan R, Almofty S, Almandil NB, AbdulAzeez S.	Comput Struct Biotechnol J	10.1016/j.csbj.2023.08.031	2023
	Selective and Sustainable Production of Sub-terminal Hydroxy Fatty Acids by a Self-Sufficient CYP102 Enzyme from Bacillus Amyloliquefaciens.	Zong L, Zhang Y, Shao Z, Ljubic A, Jacobsen C, Gao R, Eser BE, Wang Y, Guo Z.	Chembiochem	10.1002/cbic.202300368	2023
	From genome to field: Bacillus halotolerans BJ-3 as a novel biocontrol solution for grapevine Botryosphaeria dieback.	Madushani MA, Li Y, Li X, Liu M, Chen P, Zhang W, Yan J.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100483	2025
	Comparative Study of Bacillus-Based Plant Biofertilizers: A Proposed Index.	Barros-Rodriguez A, Pacheco P, Penas-Corte M, Fernandez-Gonzalez AJ, Cobo-Diaz JF, Enrique-Cruz Y, Manzanera M.	Biology (Basel)	10.3390/biology13090668	2024
Biotechnology	Confrontations of the Pathogenic Fungus Colletotrichum graminicola With a Biocontrol Bacterium or a Ubiquitous Fungus Trigger Synthesis of Secondary Metabolites With Lead Structures of Synthetic Fungicides.	Fernando Devasahayam BR, Uthe H, Poeschl Y, Deising HB.	Environ Microbiol	10.1111/1462-2920.70145	2025
	Morphogenesis and mechanical properties of Bacillus amyloliquefaciens biofilms: a comparative study of rough and smooth morphotypes	Baudu E, Raspaud E, Fontagne-Faucher C, Nait Chabane Y, Marcato-Romain C.	Curr Res Microb Sci		2025
Biotechnology	Fungicide sensitivity of grapevine bacteria with plant growth-promoting traits and antagonistic activity as non-target microorganisms.	Andreolli M, Lampis S, Tosi L, Marano V, Zapparoli G.	World J Microbiol Biotechnol	10.1007/s11274-023-03569-5	2023
	Identifying, Characterizing, and Engineering a Phenolic Acid-Responsive Transcriptional Factor from Bacillus amyloliquefaciens.	Li C, Zhou Y, Zou Y, Jiang T, Gong X, Yan Y.	ACS Synth Biol	10.1021/acssynbio.3c00206	2023
Genetics	Diosgenin producing Bacillus sp. strain IRMC27M2 as a genome-mined weapon against multidrug-resistant Candidozyma (Candida) auris	Alquwaie R, Almandil N, AlJindan R, Mahmoud N, Almofty S, Almohazey D, Alqudihi H, Hunachagi S, Dhas T, Sowmiya P, AbdulAzeez S, Borgio J.	Comput Struct Biotechnol J		2025
Genetics	Bacillus cabrialesii subsp. cabrialesii Strain TE5: A Promising Biological Control Bacterium Against the Causal Agent of Spot Blotch in Wheat.	Campos-Avelar I, Garcia Jaime MF, Morales Sandoval PH, Parra-Cota FI, de Los Santos Villalobos S.	Plants (Basel)	10.3390/plants14020209	2025
	Microtiter Plate Cultivation Systems Enable Chemically Diverse Metabolic Footprints During Bacterial Natural Product Discovery.	Lindig A, Hubmann G, Lutz S.	Biotechnol Bioeng	10.1002/bit.29002	2025
Genetics	Genomic insights into the taxonomic status and bioactive gene cluster profiling of Bacillus velezensis RVMD2 isolated from desert rock varnish in Ma'an, Jordan.	Alnaimat SM, Abushattal S, Dmour SM, Al-Awaida WJ, Ayyash AM, Goh KW.	PLoS One	10.1371/journal.pone.0319345	2025
	Impact of lifestyle on cytochrome P450 monooxygenase repertoire is clearly evident in the bacterial phylum Firmicutes.	Padayachee T, Nzuza N, Chen W, Nelson DR, Syed K.	Sci Rep	10.1038/s41598-020-70686-8	2020
Genetics	Complete genome analysis and antimicrobial mechanism of Bacillus velezensis GX0002980 reveals its biocontrol potential against mango anthracnose disease.	Wang J, Xie X, Li B, Yang L, Song F, Zhou Y, Jiang M.	Microbiol Spectr	10.1128/spectrum.02685-24	2025
	Complete Genome Sequences of Three Bacillus amyloliquefaciens Strains That Inhibit the Growth of Listeria monocytogenes In Vitro.	Tran TD, Huynh S, Parker CT, Hnasko R, Gorski L, McGarvey JA.	Genome Announc	10.1128/genomea.00579-18	2018
Genetics	Improving Beneficial Traits in Bacillus cabrialesii subsp. cabrialesii TE3^T through UV-Induced Genomic Changes.	Morales Sandoval PH, Ortega Urquieta ME, Valenzuela Ruiz V, Montanez Acosta K, Campos Castro KA, Parra Cota FI, Santoyo G, de Los Santos Villalobos S.	Plants (Basel)	10.3390/plants13182578	2024
	Engineering of acyl ligase domain in non-ribosomal peptide synthetases to change fatty acid moieties of lipopeptides.	Aoki R, Kumagawa E, Kamata K, Ago H, Sakai N, Hasunuma T, Taoka N, Ohta Y, Kobayashi S.	Commun Chem	10.1038/s42004-024-01379-w	2025
Genetics	Draft genome sequence of a thermostable, alkaliphilic alpha-amylase and protease producing Bacillus amyloliquefaciens strain KCP2.	Prajapati VS, Ray S, Narayan J, Joshi CC, Patel KC, Trivedi UB, Patel RM.	3 Biotech	10.1007/s13205-017-1005-1	2017
	Development of a Real-Time Quantitative PCR Assay for the Specific Detection of Bacillus velezensis and Its Application in the Study of Colonization Ability.	Xu S, Xie X, Shi Y, Chai A, Li B, Li L.	Microorganisms	10.3390/microorganisms10061216	2022
	Biocontrol of Peach Gummosis by Bacillus velezensis KTA01 and Its Antifungal Mechanism.	Kang TA, Lee G, Kim K, Hahn D, Shin JH, Kim WC.	J Microbiol Biotechnol	10.4014/jmb.2310.10005	2024
	Isolation and Characterization of Fengycins Produced by Bacillus amyloliquefaciens JFL21 and Its Broad-Spectrum Antimicrobial Potential Against Multidrug-Resistant Foodborne Pathogens.	Lin LZ, Zheng QW, Wei T, Zhang ZQ, Zhao CF, Zhong H, Xu QY, Lin JF, Guo LQ.	Front Microbiol	10.3389/fmicb.2020.579621	2020
	Whole-genome analysis of bacillus velezensis ZF2, a biocontrol agent that protects cucumis sativus against corynespora leaf spot diseases.	Xu S, Xie X, Zhao Y, Shi Y, Chai A, Li L, Li B.	3 Biotech	10.1007/s13205-020-2165-y	2020
Genetics	Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential.	Pinto C, Sousa S, Froufe H, Egas C, Clement C, Fontaine F, Gomes AC.	Stand Genomic Sci	10.1186/s40793-018-0327-x	2018
	Antimicrobial Effects of Potential Probiotics of Bacillus spp. Isolated from Human Microbiota: In Vitro and In Silico Methods.	Torres-Sanchez A, Pardo-Cacho J, Lopez-Moreno A, Ruiz-Moreno A, Cerk K, Aguilera M.	Microorganisms	10.3390/microorganisms9081615	2021
Genetics	Identification of Beneficial Microbial Consortia and Bioactive Compounds with Potential as Plant Biostimulants for a Sustainable Agriculture.	Tabacchioni S, Passato S, Ambrosino P, Huang L, Caldara M, Cantale C, Hett J, Del Fiore A, Fiore A, Schluter A, Sczyrba A, Maestri E, Marmiroli N, Neuhoff D, Nesme J, Sorensen SJ, Aprea G, Nobili C, Presenti O, Giovannetti G, Giovannetti C, Pihlanto A, Brunori A, Bevivino A.	Microorganisms	10.3390/microorganisms9020426	2021
Genetics	Genome Sequencing and Characterization of Bacillus velezensis N23 as Biocontrol Agent against Plant Pathogens.	Yang P, Zeng Q, Jiang W, Wang L, Zhang J, Wang Z, Wang Q, Li Y.	Microorganisms	10.3390/microorganisms12020294	2024
Metabolism	Comparative Analyses of Cytochrome P450s and Those Associated with Secondary Metabolism in Bacillus Species.	Mthethwa BC, Chen W, Ngwenya ML, Kappo AP, Syed PR, Karpoormath R, Yu JH, Nelson DR, Syed K.	Int J Mol Sci	10.3390/ijms19113623	2018
	Draft genome sequence data of a chromium reducing bacterium, Bacillus licheniformis strain KNP.	Arora PK, Mishra R, Omar RA, Saroj RS, Srivastava A, Garg SK, Singh VP.	Data Brief	10.1016/j.dib.2020.106640	2021
	Agricultural Biotechnological Potential of Bacillus velezensis C3-3 and Cytobacillus sp. T106 from Resource Islands of a Semi-arid Zone of La Guajira-Colombia.	Suarez-Bautista JD, Manotas-Viloria HS, Leal-Mejia L, Boyaca-Vasquez J, Pineros-Castro Y, Corrales LC, Cuervo-Soto L, Vanegas J.	Curr Microbiol	10.1007/s00284-024-03804-8	2024
Metabolism	Surfactin Stimulated by Pectin Molecular Patterns and Root Exudates Acts as a Key Driver of the Bacillus-Plant Mutualistic Interaction.	Hoff G, Arguelles Arias A, Boubsi F, Prsic J, Meyer T, Ibrahim HMM, Steels S, Luzuriaga P, Legras A, Franzil L, Lequart-Pillon M, Rayon C, Osorio V, de Pauw E, Lara Y, Deboever E, de Coninck B, Jacques P, Deleu M, Petit E, Van Wuytswinkel O, Ongena M.	mBio	10.1128/mbio.01774-21	2021
Phylogeny	Addition of plant-growth-promoting Bacillus subtilis PTS-394 on tomato rhizosphere has no durable impact on composition of root microbiome.	Qiao J, Yu X, Liang X, Liu Y, Borriss R, Liu Y.	BMC Microbiol	10.1186/s12866-017-1039-x	2017
Metabolism	Comparative Genomics of Bacillus amyloliquefaciens Strains Reveals a Core Genome with Traits for Habitat Adaptation and a Secondary Metabolites Rich Accessory Genome.	Belbahri L, Chenari Bouket A, Rekik I, Alenezi FN, Vallat A, Luptakova L, Petrovova E, Oszako T, Cherrad S, Vacher S, Rateb ME.	Front Microbiol	10.3389/fmicb.2017.01438	2017
Metabolism	Daqu Fermentation Selects for Heat-Resistant Enterobacteriaceae and Bacilli.	Wang Z, Li P, Luo L, Simpson DJ, Ganzle MG.	Appl Environ Microbiol	10.1128/aem.01483-18	2018
	Cloning and expression of a thermostable Î²-1,3-1,4-glucanase from Bacillus amyloliquefaciens ATCC 23350	Sun J, Wang H, Lv W, Ma C, Lou Z, Yao H, Dai Y.	Ann Microbiol	10.1007/s13213-011-0366-7	2012
Genetics	A comparative genomic study of a hydrocarbon-degrading marine bacterial consortium.	Rojas-Vargas J, Rebollar EA, Sanchez-Flores A, Pardo-Lopez L.	PLoS One	10.1371/journal.pone.0303363	2024
	An Integrated Pipeline and Overexpression of a Novel Efflux Transporter, YoeA, Significantly Increases Plipastatin Production in Bacillus subtilis.	Wang M, Zheng J, Sun S, Wu Z, Shao Y, Xiang J, Yin C, Sedjoah RCAA, Xin Z.	Foods	10.3390/foods13111785	2024
Metabolism	Analysis of RNA Methylation by Phylogenetically Diverse Cfr Radical S-Adenosylmethionine Enzymes Reveals an Iron-Binding Accessory Domain in a Clostridial Enzyme.	Gumkowski JD, Martinie RJ, Corrigan PS, Pan J, Bauerle MR, Almarei M, Booker SJ, Silakov A, Krebs C, Boal AK.	Biochemistry	10.1021/acs.biochem.9b00197	2019
Metabolism	Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.	Liu L, Wang G, Song L, Lv B, Liang W.	Sci Rep	10.1038/srep20108	2016
Genetics	A Bacillus velezensis strain isolated from oats with disease-preventing and growth-promoting properties.	Cheng C, Su S, Bo S, Zheng C, Liu C, Zhang L, Xu S, Wang X, Gao P, Fan K, He Y, Zhou D, Gong Y, Zhong G, Liu Z.	Sci Rep	10.1038/s41598-024-63756-8	2024
	Nutraceuticals in Pregnancy: A Special Focus on Probiotics.	Perna A, Venditti N, Merolla F, Fusco S, Guerra G, Zoroddu S, De Luca A, Bagella L.	Int J Mol Sci	10.3390/ijms25179688	2024
	The Use of Probiotics for Management and Improvement of Reproductive Eubiosis and Function.	Hashem NM, Gonzalez-Bulnes A.	Nutrients	10.3390/nu14040902	2022
Phylogeny	Operon-based approach for the inference of rRNA and tRNA evolutionary histories in bacteria.	Pawliszak T, Chua M, Leung CK, Tremblay-Savard O.	BMC Genomics	10.1186/s12864-020-6612-2	2020
	A novel biocontrol agent Bacillus velezensis K01 for management of gray mold caused by Botrytis cinerea.	Xue Y, Zhang Y, Huang K, Wang X, Xing M, Xu Q, Guo Y.	AMB Express	10.1186/s13568-023-01596-x	2023
	Insights Into the Cultivable Microbial Ecology of "Manna" Ash Products Extracted From Fraxinus angustifolia (Oleaceae) Trees in Sicily, Italy.	Guarcello R, Gaglio R, Todaro A, Alfonzo A, Schicchi R, Cirlincione F, Moschetti G, Francesca N.	Front Microbiol	10.3389/fmicb.2019.00984	2019
Metabolism	Expression of the lantibiotic mersacidin in Bacillus amyloliquefaciens FZB42.	Herzner AM, Dischinger J, Szekat C, Josten M, Schmitz S, Yakeleba A, Reinartz R, Jansen A, Sahl HG, Piel J, Bierbaum G.	PLoS One	10.1371/journal.pone.0022389	2011
	The Soil Nutrient Environment Determines the Strategy by Which Bacillus velezensis HN03 Suppresses Fusarium wilt in Banana Plants.	Wu X, Shan Y, Li Y, Li Q, Wu C.	Front Plant Sci	10.3389/fpls.2020.599904	2020
	Profiling for Bioactive Peptides and Volatiles of Plant Growth Promoting Strains of the Bacillus subtilis Complex of Industrial Relevance.	Mulner P, Schwarz E, Dietel K, Junge H, Herfort S, Weydmann M, Lasch P, Cernava T, Berg G, Vater J.	Front Microbiol	10.3389/fmicb.2020.01432	2020
	Probiotics Dietary Supplementation for Modulating Endocrine and Fertility Microbiota Dysbiosis.	Lopez-Moreno A, Aguilera M.	Nutrients	10.3390/nu12030757	2020
Metabolism	Biodegradation and Removal of PAHs by Bacillus velezensis Isolated from Fermented Food.	Sultana OF, Lee S, Seo H, Mahmud HA, Kim S, Seo A, Kim M, Song HY.	J Microbiol Biotechnol	10.4014/jmb.2104.04023	2021
Metabolism	Towards semi-synthetic microbial communities: enhancing soy sauce fermentation properties in B. subtilis co-cultures.	Det-Udom R, Gilbert C, Liu L, Prakitchaiwattana C, Ellis T, Ledesma-Amaro R.	Microb Cell Fact	10.1186/s12934-019-1149-2	2019
	Computational analysis of LexA regulons in Proteus species.	Lu Y, Cheng L.	3 Biotech	10.1007/s13205-021-02683-1	2021
	The Identification of Novel Diagnostic Marker Genes for the Detection of Beer Spoiling Pediococcus damnosus Strains Using the BlAst Diagnostic Gene findEr.	Behr J, Geissler AJ, Schmid J, Zehe A, Vogel RF.	PLoS One	10.1371/journal.pone.0152747	2016
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	Aminoacyl-tRNA Synthetases as Valuable Targets for Antimicrobial Drug Discovery.	Pang L, Weeks SD, Van Aerschot A.	Int J Mol Sci	10.3390/ijms22041750	2021
Metabolism	Antibiotic production by a Roseobacter clade-affiliated species from the German Wadden Sea and its antagonistic effects on indigenous isolates.	Brinkhoff T, Bach G, Heidorn T, Liang L, Schlingloff A, Simon M.	Appl Environ Microbiol	10.1128/aem.70.4.2560-2565.2003	2004
	Genotyping and toxigenic potential of Bacillus subtilis and Bacillus pumilus strains occurring in industrial and artisanal cured sausages.	Matarante A, Baruzzi F, Cocconcelli PS, Morea M.	Appl Environ Microbiol	10.1128/aem.70.9.5168-5176.2004	2004
Genetics	Characterization and complete genome analysis of the surfactin-producing, plant-protecting bacterium Bacillus velezensis 9D-6.	Grady EN, MacDonald J, Ho MT, Weselowski B, McDowell T, Solomon O, Renaud J, Yuan ZC.	BMC Microbiol	10.1186/s12866-018-1380-8	2019
Metabolism	Detection of late intermediates in virus capsid assembly by charge detection mass spectrometry.	Pierson EE, Keifer DZ, Selzer L, Lee LS, Contino NC, Wang JC, Zlotnick A, Jarrold MF.	J Am Chem Soc	10.1021/ja411460w	2014
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	Ranking of Prokaryotic Genomes Based on Maximization of Sortedness of Gene Lengths.	Bolshoy A, Salih B, Cohen I, Tatarinova T.	J Data Mining Genomics Proteomics	10.4172/2153-0602.1000151	2014
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	Isolation and identification of protease-producing Bacillus amyloliquefaciens LX-6 and its application in the solid fermentation of soybean meal.	Huang X, Li H, Han T, Wang J, Ma Z, Yu X.	Front Bioeng Biotechnol	10.3389/fbioe.2023.1226988	2023
	Engineering of thermostable phytase-xylanase for hydrolysis of complex biopolymers.	Patel DK, Patel K, Patel D, Dave G.	3 Biotech	10.1007/s13205-021-02936-z	2021
Metabolism	Isolation and characterization of a Bacillus amyloliquefaciens strain with zearalenone removal ability and its probiotic potential.	Lee A, Cheng KC, Liu JR.	PLoS One	10.1371/journal.pone.0182220	2017
Metabolism	Pulp Enhancement of Oil Palm Empty Fruit Bunches (OPEFBs) via Biobleaching by Using Xylano-Pectinolytic Enzymes of Bacillus amyloliquefaciens ADI2.	Nawawi MH, Mohamad R, Tahir PM, Asa'ari AZ, Saad WZ.	Molecules	10.3390/molecules26144279	2021
Biotechnology	Survival and virulence of Acinetobacter baumannii in microbial mixtures.	Tayabali AF, Dirieh Y, Groulx E, Elfarawi N, Di Fruscio S, Melanson K, Moteshareie H, Al-Gafari M, Navarro M, Bernatchez S, Demissie Z, Anoop V.	BMC Microbiol	10.1186/s12866-024-03471-6	2024
	Discrimination between the Two Closely Related Species of the Operational Group B. amyloliquefaciens Based on Whole-Cell Fatty Acid Profiling.	Huynh T, Voros M, Kedves O, Turbat A, Sipos G, Leitgeb B, Kredics L, Vagvolgyi C, Szekeres A.	Microorganisms	10.3390/microorganisms10020418	2022
	Characterization of a Thermostable Lichenase from Bacillus subtilis B110 and Its Effects on beta-Glucan Hydrolysis.	Huang Z, Ni G, Wang F, Zhao X, Chen Y, Zhang L, Qu M.	J Microbiol Biotechnol	10.4014/jmb.2111.11017	2022
	Bacillus spp. Isolated from Puba as a Source of Biosurfactants and Antimicrobial Lipopeptides.	Perez KJ, Viana JD, Lopes FC, Pereira JQ, Dos Santos DM, Oliveira JS, Velho RV, Crispim SM, Nicoli JR, Brandelli A, Nardi RM.	Front Microbiol	10.3389/fmicb.2017.00061	2017
Pathogenicity	Antibiotic-resistant bacteria in the guts of insects feeding on plants: prospects for discovering plant-derived antibiotics.	Ignasiak K, Maxwell A.	BMC Microbiol	10.1186/s12866-017-1133-0	2017
Enzymology	Sensitive and Specific Recombinase Polymerase Amplification Assays for Fast Screening, Detection, and Identification of Bacillus anthracis in a Field Setting.	Bentahir M, Ambroise J, Delcorps C, Pilo P, Gala JL.	Appl Environ Microbiol	10.1128/aem.00506-18	2018
Phylogeny	Molecular characterization and identification of Bacillus clausii Strains marketed for use in oral bacteriotherapy.	Senesi S, Celandroni F, Tavanti A, Ghelardi E.	Appl Environ Microbiol	10.1128/aem.67.2.834-839.2001	2001
Enzymology	Increased production of alpha-amylase by Bacillus amyloliquefaciens in the presence of glycine.	Zhang Q, Tsukagoshi N, Miyashiro S, Udaka S.	Appl Environ Microbiol	10.1128/aem.46.1.293-295.1983	1983
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	Compilation of small ribosomal subunit RNA structures.	Neefs JM, Van de Peer Y, De Rijk P, Chapelle S, De Wachter R.	Nucleic Acids Res	10.1093/nar/21.13.3025	1993
Genetics	High-Level Heat Resistance of Spores of Bacillus amyloliquefaciens and Bacillus licheniformis Results from the Presence of a spoVA Operon in a Tn1546 Transposon.	Berendsen EM, Koning RA, Boekhorst J, de Jong A, Kuipers OP, Wells-Bennik MH.	Front Microbiol	10.3389/fmicb.2016.01912	2016
	Structure determination and interception of biosynthetic intermediates for the plantazolicin class of highly discriminating antibiotics.	Molohon KJ, Melby JO, Lee J, Evans BS, Dunbar KL, Bumpus SB, Kelleher NL, Mitchell DA.	ACS Chem Biol	10.1021/cb200339d	2011
	Bioconversion and proteolytic of Hermetia illucens pupal exuviae into functional feed additive by Bacillus amyloliquefaciens fermentation.	Chang CL, Chang SC, Lin LJ, Chang JS, Lin MJ, Lee TT.	Biosci Biotechnol Biochem	10.1093/bbb/zbaf158	2025
	Rational Construction of a Robust Bacillus amyloliquefaciens Cell Factory for Acid-Stable alpha Amylase Production.	Zhang J, Li X, Wang M, Ren S, Li M, Liu Y, Lu F, Li Q, Li Y.	J Agric Food Chem	10.1021/acs.jafc.5c04227	2025
	Cover crops as a vehicle for soil application of bio-inputs based on Azospirillum brasilense and Bacillus amyloliquefaciens.	Pedrozo CD, Ferrari AS, Fronza LGL, Hintz AHR, Marques ACR, Michelon CJ, Junges E.	Braz J Biol	10.1590/1519-6984.299282	2025
Genetics	Antifungal activity and genome annotation of Bacillus amyloliquefaciens subsp. plantarum SMLR1, a potential biocontrol agent of Rhizoctonia solani.	Marzouk T, Mahjoub FH, Khiari B, Djebali N.	World J Microbiol Biotechnol	10.1007/s11274-025-04631-0	2025
	Evaluation of colonization efficiency and migration pathways of Bacillus amyloliquefaciens GZY63 in Camellia oleifera.	Zhang H, Ning Y, Sun C, Du H, Lei L, Liao Y, Liu H, Luan F.	Lett Appl Microbiol	10.1093/lambio/ovaf101	2025
	Purification and identification of novel alpha-glucosidase inhibitors in okara fermented with Bacillus amyloliquefaciens YP2.	Ji N, Li HL, Ren F, Zhang Y, Zhao B, Chen C, Zhu Y.	J Sci Food Agric	10.1002/jsfa.70185	2026
	Bacillus amyloliquefaciens YB1701 Enhances Rice Tolerance to Saline-Alkali Stress Via ROS Scavenging and Ion Homeostasis.	Yi E, Zhang J, Jiang Y, Yang L, Sun M, Wang L, Li X, Li Y, Dong Y, Ma L.	Curr Microbiol	10.1007/s00284-025-04560-z	2025
	Combined efficacy of Bacillus amyloliquefaciens CIM95 and melatonin in reducing anthracnose in strawberries (Fragaria × ananassa Duch.) by enhancing antioxidant activity and defense-related genes	Moosa A, AL-Huqail AA, Alshehri D, Alghanem SMS, Zulfiqar F, El-Shaboury GA, Al-Asmari F, Alzamel NM, Alahmari LA, Izgu T.	International Journal of Food Microbiology.		2025
Pathogenicity	Enhanced Iturin A Synthesis and Antifungal Effect of Bacillus amyloliquefaciens by Genetic Engineering of Protease, ATP Supply and itu Operon.	Zhang D, Huang K, Zou D, Wang B, Wu X, Ye C, Wei X.	J Agric Food Chem	10.1021/acs.jafc.5c05592	2025
Biotechnology	High-efficiency secretory expression of polyethylene terephthalate hydrolases in Bacillus amyloliquefaciens 205 and complete degradation of PET by its crude enzyme.	Liang H, Dong W, Fu X, Zheng H, Li M, Bai W.	Int J Biol Macromol	10.1016/j.ijbiomac.2025.148111	2025
	Multimodular Pathway Engineering of Bacillus amyloliquefaciens for Intensifying Iturin A Production.	Hou ZJ, Shang W, Song KG, Liu JH, Xu QM, Cheng JS.	J Agric Food Chem	10.1021/acs.jafc.5c06329	2025
	Separation and characterization of a novel AA9-LPMO from Bacillus amyloliquefaciens and unveiling the antibacterial and anti-cyanobacterial effects.	Li H, Rajan DK, Divya D, Zhang S, Zeng L, Li J, Zhang S.	Int J Biol Macromol	10.1016/j.ijbiomac.2025.147757	2025
	Enhancement of Thermostability and Catalytic Activity of beta-1,4-Xylanase via Rational and Semi-rational Collaborative Engineering.	Mu D, Wang D, Montalban-Lopez M, Wu X, Li X.	J Agric Food Chem	10.1021/acs.jafc.5c09584	2025
	Synergistic Effects of Bacillus subtilis and Bacillus amyloliquefaciens on Growth, Immunity, Enzymatic Indices, Immune Gene Expression, and Survival of Labeo rohita Fry in a Biofloc Culture System.	Choudhary P, Rath D, Dash SP, Kumari R, Muduli C, Das R.	Probiotics Antimicrob Proteins	10.1007/s12602-025-10733-w	2025
	Microreactors derived from water-in-water pickering emulsions for Bacillus amyloliquefaciens proliferation and synthesis of 4-methyl-5-thiazoleethanol.	Ding X, Huang W, Cao H, Ao S, Zou D, Wei X, Liu S.	Bioresour Technol	10.1016/j.biortech.2025.133231	2025
	Two antagonistic bacteria strains as potential biocontrol agents against potato late blight caused by Phytophthora infestans.	Lan Q, Liu Y, Zhang H, Su X, Li J, Tian Y.	J Appl Microbiol	10.1093/jambio/lxaf261	2025
	Safety evaluation of an extension of use of the food enzyme bacillolysin from the non-genetically modified Bacillus amyloliquefaciens strain AGS 430.	EFSA Panel on Food Enzymes (FEZ), Zorn H, Barat Baviera JM, Bolognesi C, Catania F, Gadermaier G, Greiner R, Mayo B, Mortensen A, Roos YH, Solano MLM, Van Loveren H, Vernis L, Pasch J, Liu Y.	EFSA J	10.2903/j.efsa.2025.9620	2025
Pathogenicity	Biogenic synthesis of selenium nanoparticles by Bacillus amyloliquefaciens: A promising method for mitigating mycotoxin contamination and fighting Fusarium graminearum.	Ibrahim E, Fang Y, Nasser R, Wang D, Kafsheer DAEK, Ayoade SO, Hafeez R, Al-Megrin WAI, Li B, Lin H.	J Hazard Mater	10.1016/j.jhazmat.2025.140267	2025
Biotechnology	Statistical optimization of amylase production from Bacillus amyloliquefaciens using agro-industrial waste (mango peels) under submerged fermentation by response surface methodology.	Saeed S, Shakir HA, Qazi JI.	J Microbiol Methods	10.1016/j.mimet.2025.107208	2025
	Inhibition of aflatoxin B1-induced murine hepatocyte pyroptosis by Bacillus amyloliquefaciens by activation of the Nrf2/HO-1 pathway.	Wang J, Zhao Y, Zhou Y, Wang K, Liu X, Yang J, Zhang L, Qu W, Wei H, Gu X.	Ecotoxicol Environ Saf	10.1016/j.ecoenv.2025.118688	2025
	The Monofunctional FMN Riboswitch-Binding Regulator RibR From Bacillus amyloliquefaciens Promotes Riboflavin Biosynthesis.	Hubenthal A, Mack M.	Mol Microbiol	10.1111/mmi.70015	2025
	Exploration of polyhydroxyalkanoate-producing bacteria in diverse soils with emphasis on bioremediation.	Rao N, Rai D, Madival S, S R S, Mithoor D.	Int J Environ Health Res	10.1080/09603123.2025.2589935	2025
	A Deeper Insight into the Thermostability of a Novel Laccase Designed by Data-Driven Mining and Rational Engineering.	Wang Q, Zabed HM, Zhao M, Qi X.	J Agric Food Chem	10.1021/acs.jafc.5c03876	2025
	Evaluation of Bacillus amyloliquefaciens isolate BX13 for the biocontrol of Fusarium incarnatum, a causal agent of fruit rot in postharvest muskmelon.	Xu C, Liu J, Zhang X, Jia Y, You H, Wang X, Li Y.	Pest Manag Sci	10.1002/ps.70132	2025
	Cloning, Heterologous Expression, and Antifungal Activity Evaluation of a Novel Truncated TasA Protein from Bacillus amyloliquefaciens BS-3.	Dai LM, He LL, Li LL, Liu YX, Shi YP, Su HP, Cai ZY.	Int J Mol Sci	10.3390/ijms26157529	2025
	Development and Evaluation of Antioxidant Postbiotics from Bacillus amyloliquefaciens C-1 to Alleviate DSS-Induced Colitis.	Hou X, Feng J, Qin J, Mo J, Yu R, Lv J, Li S, Tian J, Cheng Y, Han B.	Probiotics Antimicrob Proteins	10.1007/s12602-025-10689-x	2025
	Evaluation of organic products to control blueberry rust	Barry KM, Buntain M, Chau E, Simpson M, Morris S, Anderson J.	Crop Prot		2025
	Dual-cell co-catalytic system engineering enhances N-acetylneuraminic acid synthesis by Bacillus amyloliquefaciens.	Dong X, Han Z, Zou D, Guo A, Ye C, Wei X.	Bioresour Technol	10.1016/j.biortech.2025.132969	2025
	Improvement of neutral protease activity of Bacillus amyloliquefaciens LX-6 by combined ribosome engineering and medium optimization and its application in soybean meal fermentation.	Zhu Y, Huang X, Han T, Wang J, Yu X, Ma Z.	J Zhejiang Univ Sci B	10.1631/jzus.b2400477	2025
	Bacillus amyloliquefaciens HN11 enhances cowpea growth and systemic resistance to Spodoptera litura via JA/SA pathways and growth-mediated tolerance.	Yan W, Zheng Q, Luo C, Zhang Z, Xu H.	Pest Manag Sci	10.1002/ps.70022	2025
	Seed inhabiting bacterial endophyte Bacillus amyloliquefaciens (SS7) defends sorghum Sudan grass seedlings from a phytopathogen Rhizoctonia solani.	Kumar K, Kumar D, Pal G, Verma SK.	World J Microbiol Biotechnol	10.1007/s11274-025-04455-y	2025
Enzymology	Combined efficacy of Bacillus amyloliquefaciens CIM95 and melatonin in reducing anthracnose in strawberries (Fragaria × ananassa Duch.) by enhancing antioxidant activity and defense-related genes.	Moosa A, Al-Huqail AA, Alshehri D, Alghanem SMS, Zulfiqar F, El-Shaboury GA, Al-Asmari F, Alzamel NM, Alahmari LA, Izgu T.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2025.111379	2025
	Inoculation methods that enhance the survival of Bacillus strains in rice husk biochar for use as bacterial carriers.	Nakahara H, Someya N, Maeda Y, Kubota M.	Int Microbiol	10.1007/s10123-025-00737-5	2025
	Seed inhabiting bacterial endophyte Bacillus amyloliquefaciens (SS7) defends sorghum Sudan grass seedlings from a phytopathogen Rhizoctonia solani	Kumar K, Kumar D, Pal G, Verma SK.	World J Microbiol Biotechnol.		2025
Enzymology	Sustainable management of southern blight in peanut using volatile organic compounds produced by Bacillus amyloliquefaciens HK17.	Hwang SH, Noh JS, Maung CEH, Kim KY.	Microb Pathog	10.1016/j.micpath.2025.107829	2025
	Biosynthesis of the Functional Component Spermidine from Bacillus amyloliquefaciens by Iterative Integration Expression.	Zhao Z, Wu Y, Fan S, Li Z, Zou D, Guo A, Wei X.	ACS Synth Biol	10.1021/acssynbio.5c00087	2025
	Extraction and Characterization of Iturin A as a Key Factor in the Antagonism of Bacillus amyloliquefaciens M13RW01 toward Pathogenic Fungi.	Aghaali Marnani M, Madani M, Shakib P.	Recent Pat Biotechnol	10.2174/0118722083352297250326041149	2025
	Freeze-drying of Bacillus amyloliquefaciens COFCAU_P1 probiotics: process optimization, and evaluation of its immunoprotective role in Labeo rohita	Gon Choudhury T, Roy S, Kumar S, Rath D, Malla S, Tripathy PS, Kamilya D, Parhi J, Saha RK, Patel AB.	Aquac Int	10.1007/s10499-025-01922-z	2025
	Unravelling microbial interactions in a synthetic broad bean paste microbial community	Liu C, Yi F, Niu C, Li Q.	Food Microbiology.		2025
	Surfactin Activating KinB to Sense and Utilize Carbon Sources Against Cannibalism in Bacillus amyloliquefaciens.	Wen J, Wang R, Zheng Y, Jiang S, Shi H, Tan J, Zhao X, Qi G.	J Basic Microbiol	10.1002/jobm.70049	2025
	Enhancing alkaline protease production in Bacillus amyloliquefaciens via surfactin-mediated mechanisms and metabolic engineering.	Zeng F, Liu Y, Liu D, Li Y, Xu W, Li Y, Zhang H, Liu Y, Wang H, Lu F.	Bioresour Technol	10.1016/j.biortech.2025.132702	2025
	The sanitation in restrooms to respiratory health: modelling concentration distribution changes of bioaerosols across buildings with/without semi-open settings.	Zhang T, Wang Z, Zhang S, Chen Y, Li G, An T.	Environ Pollut	10.1016/j.envpol.2025.127283	2025
	Bacillus amyloliquefaciens application alleviated the stimulation of organic fertilizer on soil denitrification rate in acidic soils.	Luo L, Zhang N, Wang E, Zhao C, Liu Q, Pang X, Yin C.	Microbiol Res	10.1016/j.micres.2025.128216	2025
Enzymology	Characterization of Glutamyl Aminopeptidase with Novel Degradation Activity of Soybean Trypsin Inhibitor and Salt-Tolerance from Bacillus amyloliquefaciens phb03 in Soy Sauce Residue.	Zeng LY, Lin SK, Zou Y, Zheng QW, Tong X, Guo LQ, Hou S, Lin JF.	J Agric Food Chem	10.1021/acs.jafc.4c13056	2025
	Morphogenesis and mechanical properties of Bacillus amyloliquefaciens biofilms: a comparative study of rough and smooth morphotypes.	Baudu E, Raspaud E, Fontagne-Faucher C, Nait Chabane Y, Marcato-Romain CE.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100403	2025
	Insights into the effect and mechanism of low-bitterness porcine hemoglobin hydrolysates produced by gamma-glutamyl transpeptidase.	Cheng C, Li S, Chen L, Yu J, Zhu M, Blecker C, Zhang D.	Food Chem	10.1016/j.foodchem.2025.145292	2025
Enzymology	Semirational Design and Immobilization Synergistically Enhance Barnase Activity and Stability.	Ai Y, Montalban-Lopez M, Li P, Zhang H, Wu X, Li X, Mu D.	J Agric Food Chem	10.1021/acs.jafc.5c00758	2025
	Structural characterization of the exopolysaccharide produced by Bacillus amyloliquefaciens JM033 and evaluation of its ability to regulate immunity and intestinal flora.	Li H, Zhang Y, Zheng Y, Li X, Li Z, Man C, Zhang Y, Jiang Y.	Int J Biol Macromol	10.1016/j.ijbiomac.2025.141052	2025
	Antagonistic activity of butanamine 2,2-dinitro-N-methyl- synthesized by endosymbiotic Bacillus amyloliquefaciens VITAPRJS1 acquired from horse milk.	Chakraborty A, Dutta P, Amrit R, Dey P, Osborne WJ.	Int Microbiol	10.1007/s10123-025-00640-z	2025
Transcriptome	Molecular mechanism of selenite reduction by Bacillus amyloliquefaciens BB61 based on transcriptome analysis.	Wang Y, Wan F, Xue H, Hang Y, Pei C, Lu Y.	Biochimie	10.1016/j.biochi.2025.02.005	2025
	Productive and economic effects of adding Bacillus amyloliquefaciens CECT 5940 to bread waste-based diets in laying hens.	Manteiga AF, Changule AP, Manjate NJ, Magaia DH, Chilala FD, Joaquim LA, Chivale EJ, Dos Anjos F, Garcia-Herreros M, Bila CG.	Vet World	10.14202/vetworld.2025.969-975	2025
	In vitro and in planta testing of microbial agents for dual biological control of granary weevil and storage fungi on stored wheat grain	Ercan G, Adesemoye AO, Yuen GY, Everhart S, Campbell JF, Peterson JA.	Biol Control		2025
	Optimized Production and Characterization of Auxin by Bacillus amyloliquefaciens (TSP11) for Plant Growth Promotion.	Devi TS, Vijay K, Mythili R, Wadaan MA, Manivinoth V, Kim W, Kavitha T.	J Basic Microbiol	10.1002/jobm.70010	2025
Enzymology	Rational design of DAHP synthase and prephenate dehydrogenase for metabolic engineering of Bacillus amyloliquefaciens to produce L-tyrosine.	Ji A, Zou D, Ma A, Wei X.	Int J Biol Macromol	10.1016/j.ijbiomac.2025.142076	2025
	Interactive effects between soil properties and bacterial communities in tomato rhizosphere under the application of microbial agents.	Wei L, Zhao D, Guo L, Guo J, Zhu J, Pei Y, Guan P, Guo Z, Cui H, Gao J, Li Y, Zhang L, Wang F, Liu P.	PeerJ	10.7717/peerj.19564	2025
	Analyzing potential of next-generation probiotics in cancer management.	Naz SS, Zafar S.	Mol Biol Rep	10.1007/s11033-025-10737-3	2025
	Ferulic Acid Esterase-Producing Inoculant Improves Fiber Degradation and Modulates Microbial Diversity in Corn Bran Silage and Whole-Plant Corn Silage.	Yu Y, Guo X, Li H, Yu C, Liu H, Guo W.	Microorganisms	10.3390/microorganisms13112439	2025
	Bacillus amyloliquefaciens WF2020 isolated from fermented pickles promotes longevity and health in Caenorhabditis elegans via JNK and p38 MAPK pathways.	Yang X, Chen J, Liao Z, Fang X, Wang J.	Food Funct	10.1039/d4fo03792h	2025
	Assessment of GABA enrichment and probiotic potential in fermented okpeye by Bacillus amyloliquefaciens AUK.	Kalu AU, Wan-Mohtar WAAQI, Noor WSAWM, Mohd Zaini NA.	J Food Sci Technol	10.1007/s13197-025-06223-0	2025
	The Effect of Oral Probiotic Bacillus amyloliquefaciens on Intestinal Microbiota, Intestinal Structure, Serum Antioxidant Capacity and Inflammatory Responses of Heat Stressed Rats.	Zhang X, Tang L, Freeman BM, Wang B, Shen W, Li W.	J Microbiol Biotechnol	10.4014/jmb.2505.05008	2025
Enzymology	Decoding critical CAZyme genes and transcription factors for pathogen-suppressing lignocellulosic biomass valorization via fermentation.	Ren P, Yang T, Mei X, Wang X, Xu Y, Shen Q, Wei Z.	Bioresour Technol	10.1016/j.biortech.2025.133102	2025
	Multilevel metabolic engineering for enhanced synthesis of S-adenosylmethionine by Bacillus amyloliquefaciens	Jiang C, Zou D, Ruan L, Han W, Wei X.	Biotechnol Lett.		2024
	Insights in to the genome sequence of an endophytic Bacillus amyloliquefaciens (TNOB22) from tea and its promising biocontrol activity against major diseases of tea	Murugavel K, Karthikeyan G, Raveendran M, Sendhilvel V, Sudha A, Karthiba L, Rajendran L.	Physiol Mol Plant Pathol		2025
	Isolation of Macrolactin A from a new Bacillus amyloliquefaciens and its aphicidal activity against Rhopalosiphum padi.	Zhao K, Ma R, Cheng M, Guo T, Wu W, Song Y, Xu H, Tan A, Qin B, Wei S.	Pest Manag Sci	10.1002/ps.8589	2025
	Microbial Biopesticides' Efficacy in the Management of Tan spot in Wheat.	Bugingo C, Yabwalo D, Shires M, Ali S, Byamukama E.	Plant Dis	10.1094/pdis-03-25-0571-sc	2025
	Plant growth-promoting Bacillus amyloliquefaciens orchestrate homeostasis under nutrient deficiency exacerbated drought and salinity stress in Oryza sativa L. seedlings.	Bisht N, Singh T, Ansari MM, Joshi H, Mishra SK, Chauhan PS.	Planta	10.1007/s00425-024-04585-x	2024
Enzymology	Production of a novel cellulase by Bacillus amyloliquefaciens OKB3 isolated from soil: Purification and characterization.	Bhatt B, Bhatt K, Lal S, R S, Bhatt V.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.137454	2024
	Ralstonia solanacearum infection induces tobacco root to secrete chemoattractants to recruit antagonistic bacteria and defensive compounds to inhibit pathogen.	Feng Y, Kang Y, Wang Z, Du C, Tan J, Zhao X, Qi G.	Pest Manag Sci	10.1002/ps.8581	2025
Genetics	Diosgenin producing Bacillus sp. strain IRMC27M2 as a genome-mined weapon against multidrug-resistant Candidozyma (Candida) auris.	Alquwaie R, Almandil NB, AlJindan R, Mahmoud N, Almofty S, Almohazey D, Alqudihi HH, Hunachagi S, Dhas TS, Sowmiya P, AbdulAzeez S, Borgio JF.	Comput Struct Biotechnol J	10.1016/j.csbj.2025.07.048	2025
	Efficient production of spermidine from Bacillus amyloliquefaciens by enhancing synthesis pathway, blocking degradation pathway and increasing precursor supply.	Zhao Z, Guo A, Zou D, Li Z, Wei X.	J Biotechnol	10.1016/j.jbiotec.2024.12.001	2025
	Inducing Resistance to Xanthomonas citri pv. fuscans in Bean (Phaseolus vulgaris) Cultivars Using Biocontrol Agents and Inducers	Puia JD, Borsato LC, Hoshino AT, da Silva Moreira AM, Briozo MEO, Vigo SC, Canteri MG.	Plant Pathol		2025
	Bacillus amyloliquefaciens modulate autophagy pathways to control Rhizoctonia solani infection in rice.	Ansari MM, Bisht N, Singh T, Mishra SK, Anshu A, Singh PC, Chauhan PS.	Plant Physiol Biochem	10.1016/j.plaphy.2024.109317	2025
	Assessment of petroleum hydrocarbons biodegradation by indigenous Bacillus strains from Khyber Pakhtunkhwa, Pakistan.	Haris M, Asim N, Hassan MU, Iqbal N, Shafique F, Ali I, Khan NU.	Microb Pathog	10.1016/j.micpath.2025.107728	2025
	Biocontrol Ability of Strain Bacillus amyloliquefaciens SQ-2 against Table Grape Rot Caused by Aspergillus tubingensis.	Li S, Dai S, Huang L, Cui Y, Ying M.	J Agric Food Chem	10.1021/acs.jafc.4c04139	2024
Enzymology	Enhanced Production, Enzymatic Activity, and Thermostability of an alpha-Amylase from Bacillus amyloliquefaciens in Lactococcus lactis.	Wei D, Ma T, Montalban-Lopez M, Li X, Wu X, Mu D.	J Agric Food Chem	10.1021/acs.jafc.4c05070	2024
	Effects of dietary inclusion of Bacillus amyloliquefaciens AV5 on growth performance, antioxidant activity, innate immune, and hematological responses in Nile tilapia (Oreochromis niloticus) reared at low and high stocking densities.	Shija VM, Zhimin J, Chen H, Amoah K, Li Y, Ng'onga L, Ndandala CB, Zhong Y, Masanja F, Huang J, Cai J.	Fish Shellfish Immunol	10.1016/j.fsi.2024.110042	2025
	De novo synthesis of hyaluronic acid with tailored molecular weights using a new hyaluronidase SthHL.	Zhong Q, Shi X, Song Y, Lei P, Xu X, Xu H, Qiu Y, Li S.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.139381	2025
	Multifaceted growth promotion and biocontrol of Agroathelia rolfsii and induction of defense mechanism by Bacillus amyloliquefaciens SS-CR10 on chilli.	Santhosh CR, Mahadevakumar S, Nuthan BR, Bharatha M, Parashiva J, Mahesh M, Chandranayaka S, Satish S.	Physiol Plant	10.1111/ppl.14627	2024
	Microbial inoculum improved soil aggregate formation and increased cucumber yield in a greenhouse under secondary salinization conditions.	Peng Y, Zhang H, Li G, Zhang J.	J Environ Manage	10.1016/j.jenvman.2025.124576	2025
Genetics	Genomic characterization and proteomic analysis of Bacillus amyloliquefaciens in response to lignin.	Li X, Gao T, Zhang Y, Yu X, Wang Q, Li S, Wang S, Gao L, Li H.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.136611	2024
	Metagenomic functional profiling to propose the anti-inflammatory properties of probiotic supplementation	Jacobs RW, Rimal B, Gordon ME.	J Equine Vet Sci		2025
	Bacillus amyloliquefaciens SC06 alleviates LPS-induced intestinal damage by inhibiting endoplasmic reticulum stress and mitochondrial dysfunction in piglets.	Wang Q, Jin Q, Wang F, Wang Y, Li X, Zhou Y, Xu S, Fu A, Li W.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.137307	2024
	Analyzing the pressure resistant, sublethal injury and resuscitable viable but non-culturable state population of Escherichia coli, Staphylococcus aureus, Bacillus amyloliquefaciens and Lactiplantibacillus plantarum under high pressure processing	Yang D, Jiang Z, Meng Q, Wang S, Pan H, Rao L, Liao X.	Food Research International.		2024
	Dietary administration of Bacillus amyloliquefaciens AV5 on antioxidant activity, blood parameters, and stress responses of Nile tilapia (Oreochromis niloticus) raised under hypoxia and temperature variability.	Shija VM, Zakaria GE, Amoah K, Li Y, Masanja F, Zhong Y, Zhong X, Cai J.	Microb Pathog	10.1016/j.micpath.2024.107067	2024
	Bacillus endophytes for sustainable management of tomato spotted wilt virus and yield production.	Khan R, He P, Chen X, He P, Ahmed A, Wu Y, Tang G, Tang P, Li X, Munir S, He Y.	Pest Manag Sci	10.1002/ps.8606	2025
	Multilevel metabolic engineering for enhanced synthesis of S-adenosylmethionine by Bacillus amyloliquefaciens.	Jiang C, Zou D, Ruan L, Han W, Wei X.	Biotechnol Lett	10.1007/s10529-024-03523-x	2024
	Unravelling microbial interactions in a synthetic broad bean paste microbial community.	Liu C, Yi F, Niu C, Li Q.	Food Microbiol	10.1016/j.fm.2025.104767	2025
Phenotype	Influence of Heterodera glycines Virulence Phenotypes on the Performance of Nematode-Protectant Seed Treatments.	Barizon J, Bissonnette K, Biggs M, Haafke A, Bish M.	J Nematol	10.2478/jofnem-2025-0032	2025
	Comparative performance of biological formulations for the management of Meloidogyne enterolobii in chickpea (Cicer arietinum)	Cunha DF, Pinto TJB, Correia VR, Junior ABM, Rafael FS, Santos LA, Santos EVd, Cares JE, Boiteux LS, Pinheiro JB.	Crop Prot		2025
	The structural properties of "Huilou" yam starch fermented with five microbial species.	Xing X, Song Y, Yang Y, Tang N, Pan L, Wang Y, Chen Q, Gao H, Ni K, Sun Y, Shen L, Shen W, Ding J, Yang Y.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.135955	2024
	Makeup testers as reservoirs and transmission sources of antibiotic resistant bacteria.	Bedaida IK, Bendjama E, Chelaghma W, Zouzou A, Benabderrahmane H, Rolain JM, Loucif L.	Infect Dis Health	10.1016/j.idh.2025.03.001	2025
Pathogenicity	Bacillus amyloliquefaciens SC06 Attenuated Lipopolysaccharide-Induced acute liver injury by suppressing bile acid-associated NLRP3 inflammasome activation.	Wang Q, Wang F, Zhou Y, Li X, Xu S, Tang L, Jin Q, Fu A, Yang R, Li W.	Int Immunopharmacol	10.1016/j.intimp.2024.113129	2024
	Bacillus amyloliquefaciens G02 enhances selenium uptake in lettuce (Lactuca sativa) by improving soil selenium availability and rhizosphere microbiome regulation.	Huang B, Li B, Pan G, Huang D, Yang G, Ma Y, Ya F, Rao M, Wei Y.	Front Microbiol	10.3389/fmicb.2025.1656037	2025
	Enhancement of Green Production of Heme by Deleting Odor-Related Genes from Bacillus amyloliquefaciens Based on CRISPR/Cas9n.	Jiang C, Zou D, Jiang X, Han W, Chen K, Ma A, Wei X.	J Agric Food Chem	10.1021/acs.jafc.4c04521	2024
	A novel approach to produce soy protein isolate: Direct enzymatic hydrolysis of high-temperature soybean meal using proteinase produced by microbial solid-state fermentation.	Zhu J, Liu D, Lu F, Liu X, Wang Y, Ma H.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.135598	2024
Genetics	Genomic Insights into Combating Anthracnose with an Endophytic Bacillus amyloliquefaciens Strain.	Zhang H, Zhang J, Tong Y, Luan Z, Hou J, Luan F.	Plant Dis	10.1094/pdis-06-23-1169-sc	2024
Transcriptome	Biodegradation Characteristics and Mechanism of Aflatoxin B₁ by Bacillus amyloliquefaciens from Enzymatic and Multiomics Perspectives.	Shi H, Chang G, Zhang Y, Zhao Y, Wang H, Zhang J, Zhu J.	J Agric Food Chem	10.1021/acs.jafc.4c04055	2024
	Dynamic changes in the metabolome and microbiome during Citrus depressa Hayata liquid fermentation.	Liu TW, Iskandar B, Chu MH, Wang YH, Huang TA, Hsu SJ, Hsieh YSY, Lee CK.	Food Chem	10.1016/j.foodchem.2024.141225	2025
	Hypocholesterolemic potential of Bacillus amyloliquefaciens KAVK1 modulates lipid accumulation on 3T3-L1 adipose cells and high fat diet-induced obese rat model	Kokila V, Namasivayam SKR, Amutha K, Kumar RR, Bharani RSA, Surya P.	World J Microbiol Biotechnol.		2024
	Bacillus amyloliquefaciens Protect Against Atherosclerosis Through Alleviating Foam Cell Formation and Macrophage Polarization.	Xue Q, Ma Y, Shao H.	Curr Microbiol	10.1007/s00284-024-03775-w	2024
	Investigation into the potential mechanism of Bacillus amyloliquefaciens in the fermentation of broad bean paste by metabolomics and transcriptomics	Lin H, Liao S, Zhou Z, Yan Z, Zhao J, Xiang Y, Xu M, Zhao J, Liu P, Ding W, Rao Y, Tang J.	Food Research International.		2024
	Biocontrol potential of Bacillus amyloliquefaciens YZU-SG146 from Fraxinus hupehensis against Verticillium wilt of cotton	Liu L, Galileya Medison R, Zheng Tw, Meng Xj, Sun Zx, Zhou Y.	Biol Control		2024
	Data on the production of antioxidant exopolysaccharides produced by Bacillus amyloliquefaciens KW8 using cassava pulp and nitrogen supplement optimized via Response Surface Methodology.	Sutthi N, Karirat T, Promjamorn P, Ma NL, Luang-In V.	Data Brief	10.1016/j.dib.2025.111994	2025
	Construction of lignocellulose-degrading compound microbial inoculum and its effects on green waste composting.	Feng X, Qiu M, Zhang L.	J Environ Manage	10.1016/j.jenvman.2024.122502	2024
	Antifungal efficacy of Bacillus amyloliquefaciens ZK-9 against Fusarium graminearum and analysis of the potential mechanism of its lipopeptides.	Yi Y, Luan P, Fan M, Wu X, Sun Z, Shang Z, Yang Y, Li C.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2024.110821	2024
	Elucidating the growth-promoting factors of Bacillus amyloliquefaciens on rapeseed through metabolomics.	Pei S, Yue D, Yaoying Y, Zijin H, Zhongmei Z, Xiaoxiang Y, Lei Z, Yong L, Xiaoqin H.	BMC Plant Biol	10.1186/s12870-025-07538-y	2025
	Multiple Perspectives of Study on the Potential of Bacillus amyloliquefaciens JB20221020 for Alleviating Nutrient Stress in Lettuce.	Bai Y, Zheng X, Ma J, Liu H, Zeng H, Zhang F, Wang J, Song K.	Curr Microbiol	10.1007/s00284-024-03752-3	2024
	Spore germination and lactic acid combined treatment: A new processing strategy for the shelf-life extension of instant wet noodles.	Zhang Q, Gu F, Li T, Guo X, Li Y, Liang M, Wang F, Guo Q, Wang Q.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2024.110829	2024
	In vitro and genomic mining studies of anti-Clostridium perfringens Compounds Derived from Bacillus amyloliquefaciens.	Li C, Yan X, Yang Y, Nou X, Sun Z, Lillehoj HS, Lu M, Harlow K, Rivera I.	Poult Sci	10.1016/j.psj.2024.103871	2024
	Phenylalanine as an effective stabilizer and aggregation inhibitor of Bacillus amyloliquefaciens alpha-amylase.	Adibi L, Yaghmaei P, Maghami P, Ebrahim-Habibi A.	AMB Express	10.1186/s13568-024-01712-5	2024
Metabolism	Elucidation of PGPR-responsive OsNAM2 regulates salt tolerance in Arabidopsis by AFP2 and SUS protein interaction.	Joshi H, Harter K, Rohr L, Mishra SK, Chauhan PS.	Microbiol Res	10.1016/j.micres.2024.127890	2024
	Exploring bacterial cell-free supernatants, unfiltered ferments and crude bacteria uses of Xenorhabdus and Photorhabdus (Morganellaceae) for controlling Botrytis cinerea (Helotiales: Sclerotiniaceae)	Vicente-Diez I, Carpentero E, Pou A, Campos-Herrera R.	Biol Control		2024
	Coinoculation of Saccharomyces cerevisiae and Bacillus amyloliquefaciens in solid-state and submerged coffee fermentation: Influences on chemical and sensory compositions	Janne Carvalho Ferreira L, Luiz Lima Bertarini P, Rodrigues do Amaral L, Souza Gomes Md, Maciel de Oliveira L, Diniz Santos L.	Lebensm Wiss Technol		2024
Metabolism	Hypocholesterolemic potential of Bacillus amyloliquefaciens KAVK1 modulates lipid accumulation on 3T3-L1 adipose cells and high fat diet-induced obese rat model.	Kokila V, Namasivayam SKR, Amutha K, Kumar RR, Bharani RSA, Surya P.	World J Microbiol Biotechnol	10.1007/s11274-024-04016-9	2024
	Enhanced Iturin A Production of Engineered Bacillus amyloliquefaciens by Knockout of Endogenous Plasmid and Rap Phosphatase Genes.	Hou ZJ, Cao CY, Gao GR, Ding MZ, Xu QM, Cheng JS.	J Agric Food Chem	10.1021/acs.jafc.4c02810	2024
	Acute and prolonged effects of Bacillus amyloliquefaciens GF424-derived SOD on antioxidant defense in healthy individuals challenged with intense aerobic exercise.	Nam YE, Kim HJ, Kwon O.	Free Radic Biol Med	10.1016/j.freeradbiomed.2024.09.015	2024
	Dietary Bacillus improves behavior, intestinal health, and growth of juvenile sea cucumbers Apostichopus japonicus at low temperature.	Ding P, Li X, Huang X, Yu Y, Zhao Z, Wang H, Wang X, Ding J, Chang Y, Zhao C.	J Therm Biol	10.1016/j.jtherbio.2025.104053	2025
	Effects of Dietary Bacillus amyloliquefaciens SCAU-070 (Based on a Woody Plant-Based Diet) on Antioxidation, Immune and Intestinal Microbiota of Tilapia (Oreochromis niloticus).	Chen Q, Wu F, Chen X, Yang Q, Ye B, Chen X, Zhang X, Pan Q.	Microorganisms	10.3390/microorganisms12061049	2024
	A Novel Bacillus amyloliquefaciens Specifically Improving the Solubility and Antioxidant Activities of Edible Bird's Nest.	Li XL, Lian JM, Chen XL, Fan QY, Yan Y, Cui FJ.	Curr Microbiol	10.1007/s00284-024-03675-z	2024
	Bacillus amyloliquefaciens LM-1 Affects Multiple Cell Biological Processes in Magnaporthe oryzae to Suppress Rice Blast.	Liang M, Feng A, Wang C, Zhu X, Su J, Xu Z, Yang J, Wang W, Chen K, Chen B, Lin X, Feng J, Chen S.	Microorganisms	10.3390/microorganisms12061246	2024
	Influence of biofertilizers on potato (Solanum tuberosum L.) growth and physiological modulations for water and fertilizers managing	Rawaa A, Hichem H, Labidi S, Jeddi FB, Mhadhbi H, Naceur D.	S Afr J Bot		2024
	Plant growth promoting Rhizobacteria for sustainable tomato production	Haile D, Tesfaye B, Fassil Assefa.	S Afr J Bot		2024
	Investigation into the potential mechanism of Bacillus amyloliquefaciens in the fermentation of broad bean paste by metabolomics and transcriptomics.	Lin H, Liao S, Zhou Z, Yan Z, Zhao J, Xiang Y, Xu M, Zhao J, Liu P, Ding W, Rao Y, Tang J.	Food Res Int	10.1016/j.foodres.2024.114202	2024
	Monitoring and controlling bacteria in cleanrooms of pharmaceutical plant model: an in vitro study.	Moheb N, Mohamed AF, Elbaghdady KZ, Saeed AM, Abu-Elghait M.	Environ Monit Assess	10.1007/s10661-024-13445-w	2024
	Improvement of branched-chain amino acid production by isolated high-producing protease from Bacillus amyloliquefaciens NY130 on isolated soy/whey proteins and their muscle cell protection.	Jeon SH, Seong HJ, Kim H, Kim D, Yang KY, Nam SH.	Food Chem	10.1016/j.foodchem.2024.139327	2024
	Improving salt-tolerant artificial consortium of Bacillus amyloliquefaciens for bioconverting food waste to lipopeptides.	Zhang YM, Qiao B, Shang W, Ding MZ, Xu QM, Duan TX, Cheng JS.	Waste Manag	10.1016/j.wasman.2024.04.006	2024
Enzymology	Study on the influence of microorganisms on the flavor of black tea.	Liao S, Mo H, Gao Y, Bouphun T, Xu W, Lin L.	Food Chem X	10.1016/j.fochx.2025.103173	2025
	Isolation and Characterization of a Bacillus amyloliquefaciens Bacteriophage JBA6 and Its Endolysin PlyJBA6.	Kim J, Kong M.	J Microbiol Biotechnol	10.4014/jmb.2502.02026	2025
	Integrated Biofilm Modification and Transcriptional Analysis for Improving Fengycin Production in Bacillus amyloliquefaciens.	Cao CY, Hou ZJ, Ding MZ, Gao GR, Qiao B, Wei SY, Cheng JS.	Probiotics Antimicrob Proteins	10.1007/s12602-024-10266-8	2025
	Bacillus amyloliquefaciens SC06 Relieving Intestinal Inflammation by Modulating Intestinal Stem Cells Proliferation and Differentiation via AhR/STAT3 Pathway in LPS-Challenged Piglets.	Wang Q, Wang F, Zhou Y, Li X, Xu S, Jin Q, Li W.	J Agric Food Chem	10.1021/acs.jafc.3c05956	2024
Enzymology	Gut microbiota modulation and immunity enhancement by Bacillus amyloliquefaciens NL1.2: A fiber-degrading probiotic isolated from native Thai swine.	Khongkool K, Taweechotipatr M, Payungporn S, Sawaswong V, Lertworapreecha M.	Vet World	10.14202/vetworld.2025.1487-1507	2025
	Optimizing laying hen diets: effect of partial maize meal replacement with wheat bran or biscuits crumbs and Bacillus amyloliquefaciens CECT 5940.	Manteiga AF, Changule AP, Magaia DH, Manjate NJ, Chilala FD, Joaquim LA, Chivale EJ, Anjos FD, Tomo OHT, Garcia-Herreros M, Bila C.	Front Vet Sci	10.3389/fvets.2025.1557640	2025
Enzymology	Screening signal peptidase based on split-GFP assembly technology to promote the secretion of alkaline protease AprE in Bacillus amyloliquefaciens.	Li D, Cai Y, Guo J, Liu Y, Lu F, Li Q, Liu Y, Li Y.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.132166	2024
	Biocontrol of Fusarium oxysporum f. sp. cepae on Indonesian Local Garlic Plants (Lumbu Hijau) Using a Consortium of Bacillus amyloliquefaciens B1 and Arbuscular Mycorrhizal Fungi.	Dewi FS, Dewi RR, Abadi AL, Setiawan A, Aini LQ, Syib'li MA.	Mycobiology	10.1080/12298093.2024.2433826	2025
	Bioprospecting of microbial agents and their metabolites as potential inhibitors of Phytophthora cinnamomi, the causal agent of avocado root rot	Ayyandurai M, Theradimani M, Harish S, Manonmani K, Madhu GS, Yesu Raja I, Balakumbahan R, Kavitha Pushpam A.	Physiol Mol Plant Pathol		2024
	Exploring the rhizospheric bacterial community of selected millets for plant growth promotion activity in tomato.	Sakthivel A, Santhanalakshmi B, Sahayarayan JJ, Sivanandhan G, Mani RR, Chang SW, Ravindran B, Chokkakula S, Kapildev G.	Front Plant Sci	10.3389/fpls.2025.1629184	2025
	Unraveling the role of intra-cellular metabolites in the lactic acid production by novel Bacillus amyloliquefaciens using sugarcane molasses as a substratum.	Vignesh Kumar B, Muthumari B, Kavitha M, John Praveen Kumar JK, Jothi Basu M.	Mol Omics	10.1039/d3mo00141e	2024
	One stone two birds: Endophytes alleviating trace elements accumulation and suppressing soilborne pathogen by stimulating plant growth, photosynthetic potential and defense related gene expression.	Imran M, Sun Z, Abo-Elyousr KAM, Ali H, Aldayel MF, Li C.	J Hazard Mater	10.1016/j.jhazmat.2024.135084	2024
	Harnessing the highly adaptable barnase-barstar system for genetic biocontrol of Aedes aegypti.	Nevard K, Ang JXD, Anderson MAE, Gonzalez E, Shackleford L, Alphey L.	Commun Biol	10.1038/s42003-025-08588-6	2025
	Identification of an antifungal lipopeptide from Bacillus amyloliquefaciens HAU3 inhibiting the growth of Fusarium graminearum using preparative chromatography and 2D-NMR.	Liu Y, Shi Z, Wan X, Wang R, Liu Y, Gong Y, Li D, Zhang Y, Li H, Li G, Liu X, Sun X, Kang X, Wang Y.	Microbiol Spectr	10.1128/spectrum.00218-25	2025
	An oxalate decarboxylase-like cupin domain containing protein is involved in imparting acid stress tolerance in Bacillus amyloliquefaciens MBNC	Chowdhury N, Naorem RS, Hazarika DJ, Goswami G, Dasgupta A, Bora SS, Boro RC, Barooah M.	World J Microbiol Biotechnol.		2024
	Improved engineered fungal-bacterial commensal consortia simultaneously degrade multiantibiotics and biotransform food waste into lipopeptides.	Shang W, Zhang YM, Ding MZ, Sun HZ, He JX, Cheng JS.	J Environ Manage	10.1016/j.jenvman.2024.123177	2024
	Potentiation effect of the AI-2 signaling molecule on postharvest disease control of pear and loquat by Bacillus amyloliquefaciens and its mechanism.	Sun J, Nie L, Xie W, Zheng X, Zhou WW.	Food Chem	10.1016/j.foodchem.2024.138373	2024
Genetics	Whole-Genome Sequencing of Two Potentially Allelopathic Strains of Bacillus from the Roots of C. equisetifolia and Identification of Genes Related to Synthesis of Secondary Metabolites.	Wang Y, Chen P, Lin Q, Zuo L, Li L.	Microorganisms	10.3390/microorganisms12061247	2024
	Peptidomics- inspired discovery and activity evaluation of antioxidant peptides in multiple strains mixed fermentation of Porphyra yezoensis.	Yang J, Zhao P, Wang Q, Xu F, Bai Y, Pan S, Wang W, Tang DYY, Show PL.	Food Chem	10.1016/j.foodchem.2024.139779	2024
Genetics	Genome-Driven Functional Validation of Bacillus amyloliquefaciens Strain MEPW12: A Multifunctional Endophyte for Sustainable Sweet Potato Cultivation.	Wang Y, Hao J, Gu J, Wu J, Zhang Y, Liang T, Bai H, Cao Q, Jiang J, Li L, Cao X.	Microorganisms	10.3390/microorganisms13061322	2025
	Production of Nattokinase from Bacillus amyloliquefaciens MRS18: A Bacterial Strain Isolated from Fermented Beans.	Coutinho SB, Shirodkar RR, Kanjirakkandy A, Arulmozhi V, Vaithilingam M, Chandrasekaran SD.	Cardiovasc Hematol Agents Med Chem	10.2174/0118715257275639231219054353	2024
	An oxalate decarboxylase-like cupin domain containing protein is involved in imparting acid stress tolerance in Bacillus amyloliquefaciens MBNC.	Chowdhury N, Naorem RS, Hazarika DJ, Goswami G, Dasgupta A, Bora SS, Boro RC, Barooah M.	World J Microbiol Biotechnol	10.1007/s11274-023-03870-3	2024
	Bacillus amyloliquefaciens SC06 alleviated intestinal damage induced by inflammatory via modulating intestinal microbiota and intestinal stem cell proliferation and differentiation.	Wang Q, Wang F, Tang L, Wang Y, Zhou Y, Li X, Jin M, Fu A, Li W.	Int Immunopharmacol	10.1016/j.intimp.2024.111675	2024
	Multi-omics analysis reveals the effects of three application modes of plant growth promoting microbes biofertilizer on potato (Solanum tuberosum L.) growth under alkaline loess conditions.	Tian Y, Liu Y, Yue L, Zhao X, Zhou Q, Uwaremwe C, Wang Y, Chen G, Sha Y, Zhang Y, Wang R.	Microbiol Res	10.1016/j.micres.2024.127855	2024
	Characterization of Microbes Involved in Anaerobic Fermentation of Various Jiaosu.	Wang Y, Feng S, Liu SM, Zheng ZS, Wang LX, Hu XF.	Int J Food Sci	10.1155/ijfo/7073400	2025
	Characterization of levans produced by levansucrases from Bacillus amyloliquefaciens and Gluconobacter oxydans: Structural, techno-functional, and anti-inflammatory properties	Sahyoun AM, Wong Min M, Xu K, George S, Karboune S.	Carbohydrate polymers.		2024
	Bacillus amyloliquefaciens Regulates the Keap1/Nrf2 Signaling Pathway to Improve the Intestinal (Caco-2 Cells and Chicken Jejunum) Oxidative Stress Response Induced by Lipopolysaccharide (LPS).	Chen X, Zheng A, Li S, Wang Z, Chen Z, Chen J, Zou Z, Liang H, Liu G.	Antioxidants (Basel)	10.3390/antiox13121550	2024
	Impacts of Bacillus probiotics on productive performance and egg quality criteria in laying Japanese quails	Cufadar Y, Beyari EA, Hassoubah SA, Curabay B, Sevim B, Aksoy A, Alfassam HE, Rudayni HA, Allam AA, Youssef IM, Moustafa M, Al-Shahrani MO, Algopishi U, Hassan H, Abd El-Hack ME.	Journal of applied poultry research.		2024
	Bacillus amyloliquefaciens SC06 Ameliorated Intestinal Mucosal Injury by Regulated Intestinal Stem Cells Proliferation and Differentiation via Activating Wnt/beta-Catenin Signal Pathway in Clostridium perfringens-Challenged Mouse.	Deng H, Cheng S, Fan J, Hao H, Fang D, Li W, Wang Q.	Microorganisms	10.3390/microorganisms13092136	2025
	Investigating Bacillus amyloliquefaciens VFS2 for Vicia faba-fusarium wilt biocontrol and plant growth promotion under osmotic stress.	Haddoudi I, Mrabet M, Cabrefiga J, Mora I, Mhadhbi H, Montesinos E.	Pest Manag Sci	10.1002/ps.70078	2025
Transcriptome	Impact of energy metabolism pathways in promoting phytoremediation of cadmium contamination by Bacillus amyloliquefaciens Bam1.	Jiang X, Chen X, Gao H, Luo J, Zhang L, Luo Y, Wu H.	Bioresour Bioprocess	10.1186/s40643-025-00972-8	2025
	The combination of Bacillus amyloliquefaciens and Purpureocillium lilacinum in the control of Meloidogyne enterolobii	de Paula LL, Campos VP, Terra WC, de Brum D, Jacobs DC, Xuan Bui H, Desaeger J.	Biol Control	10.1016/j.biocontrol.2023.105438	2024
	Tacrolimus analogue produced by Bacillus amyloliquefaciens HSSN09 suppresses watermelon Fusarium wilt by antagonizing FON	Yang BY, Yang JX, Wang G, Dong WP, Xu PL, Zheng Y, Yang W, Yao XF, Xu JH, Guo JH, Luo YM, Niu DD, Yu YY, Jiang CH.	Biol Control	10.1016/j.biocontrol.2024.105447	2024
	Identification and investigation of the effects of N-acetylmuramoyl-L-alanine amidase in Bacillus amyloliquefaciens for the cell lysis and heterologous protein production.	Zhang J, Lu F, Li M.	Int J Biol Macromol	10.1016/j.ijbiomac.2023.128468	2024
	Molecular Basis of the Granular Characteristics of Small-Granule Starch: A Comparative Study.	Chen C, Huang Y, Zhu F.	J Agric Food Chem	10.1021/acs.jafc.4c01561	2024
	Ralstonia solanacearum Secretions Induce Shifts in Macrolactin Composition and Reduction in Antimicrobial Activity of Bacillus amyloliquefaciens BNC5.	Onuh AC, Manopaek R, Vangnai AS, Tiyayon P, Vinayavekhin N.	J Agric Food Chem	10.1021/acs.jafc.5c03489	2025
Stress	The process of solid-state fermentation of soybean meal: antimicrobial activity, fermentation heat generation and nitrogen solubility index.	Zhu J, Lu F, Liu D, Zhao X, Chao J, Wang Y, Luan Y, Ma H.	J Sci Food Agric	10.1002/jsfa.13209	2024
	Phytoremediation technology for recovery of Ni by Acacia plants in association with Bacillus amyloliquefaciens isolated from E-waste contaminated site.	Joradon P, Poolpak T, Kruatrachue M, Yang KM, Saengwilai P, Upatham S, Pokethitiyook P.	Int J Phytoremediation	10.1080/15226514.2023.2282043	2024
	Bacillus amyloliquefaciens CU33 Fermented Product Improves Growth Performance, Diarrhea, and Immunity of Goat Kids.	Lee TY, Lee YS, Wu CP, Weng BC, Chen KL.	Animals (Basel)	10.3390/ani15091324	2025
	Effects of a potential host gut-derived probiotic, Bacillus amyloliquefaciens AV5, on the growth, biochemical and metabolic responses, and disease resistance of Nile tilapia (Oreochromis niloticus)	Shija VM, Chen H, Huang J, Masanja F, Zhong Y, Li Y, Amoah K, Zhimin J, Ndandala CB, Cai J.	Aquaculture		2024
	Bioactivity and genome analysis of Bacillus amyloliquefaciens GL18 isolated from the rhizosphere of Kobresia myosuroides in an alpine meadow.	Chen L, Xie YL, Wu XH, Wu LL, Yang J, Gao Y, Mi Y, Yang F.	Antonie Van Leeuwenhoek	10.1007/s10482-023-01917-x	2024
	Effect of Bacillus amyloliquefaciens supplementation on intramuscular fat accumulation and meat quality in finishing pigs.	Ndlandla TW, Cheng FY, Huang CW, Yang KT.	Anim Biosci	10.5713/ab.24.0399	2025
	Bacillus amyloliquefaciens- modified clay for controlling harmful algal blooms in eutrophic aquaculture ponds.	Wu Z, Yu Z, Song X, Jiang K, Cao X, Yuan Y.	Front Microbiol	10.3389/fmicb.2025.1550905	2025
	Bio-Organic Fertilizer Application Enhances Silage Maize Yield by Regulating Soil Physicochemical and Microbial Properties.	Tang Y, Nian L, Zhao X, Li J, Wang Z, Dong L.	Microorganisms	10.3390/microorganisms13050959	2025
	Biological activity of silver nanoparticles synthesized from untapped secondary metabolites of Olea europea endophytic Bacillus amyloliquefaciens.	Hayat F, Khan SA, Khan M, Khan Z, Kim HY, Qadeer A, Alzahrani KJ, Alzahrani FM, Hamayun M.	PLoS One	10.1371/journal.pone.0321134	2025
	Oxydifficidin, a potent Neisseria gonorrhoeae antibiotic due to DedA-assisted uptake and ribosomal protein RplL sensitivity.	Kan J, Morales-Amador A, Hernandez Y, Ternei MA, Lemetre C, Maclntyre LW, Biais N, Brady SF.	Elife	10.7554/elife.99281	2025
	The influence of biological preparations on soil parameters and aclonifen removal.	Szpyrka E, Aleksandra P, Natalia S, Ksiazek-Trela P.	Sci Rep	10.1038/s41598-025-10351-0	2025
Genetics	Isolation and characterization of new antagonistic bacteria P10-7 and evaluation of its biocontrol potential against tomato gray mold.	Chen D, Yue D, Li G, Zhang Z, Zhou L, Xu H, Liu D, Wang X.	Front Microbiol	10.3389/fmicb.2025.1668865	2025
	Endophytic and antagonistic Bacillus amyloliquefaciens 8SE-IF1-derived nanoparticles encumber phytopathogenic oomycetes, fungi, bacteria, and viruses with enhanced growth in tomato seedlings.	Sharmila AM, Johnson JM, Sam SS, Chandran DR, Ajay B, Heera G, Sarada S, Thomas UC, Alex S, Radhakrishanan NV.	Front Microbiol	10.3389/fmicb.2025.1612335	2025
	Insight into the thrombolytic ability of an extracellular fibrinolytic enzyme from Bacillus amyloliquefaciens GXU-1 isolated from Sipunculus nudus.	Jiang H, Shi R, Li X, Tang J, Min D.	Protein Expr Purif	10.1016/j.pep.2023.106371	2024
	CRISPR-dCpf1 mediated whole genome crRNA inhibition library for high-throughput screening of growth characteristic genes in Bacillus amyloliquefaciens LB1ba02.	Xin Q, Jia H, Wang B, Pan L.	Int J Biol Macromol	10.1016/j.ijbiomac.2023.127179	2023
	The Association between Broiler Litter Microbiota and the Supplementation of Bacillus Probiotics in a Leaky Gut Model.	Horyanto D, Bajagai YS, von Hellens J, Chen X, Thi Thu Hao V, Dunlop MW, Stanley D.	Animals (Basel)	10.3390/ani14121758	2024
	The Rhizobacterium Bacillus amyloliquefaciens MHR24 Has Biocontrol Ability Against Fungal Phytopathogens and Promotes Growth in Arabidopsis thaliana.	Hernandez-Rodriguez M, Jasso-de Rodriguez D, Hernandez-Castillo FD, Moggio I, Arias E, Valenzuela-Soto JH, Flores-Olivas A.	Microorganisms	10.3390/microorganisms12112380	2024
	Auxin-Producing Bacteria Used as Microbial Biostimulants Improve the Growth of Tomato (Solanum lycopersicum L.) Seedlings in Hydroponic Systems.	Pappalettere L, Bartolini S, Toffanin A.	BioTech (Basel)	10.3390/biotech13030032	2024
	Optimization of the fermentation culture conditions of Bacillus amyloliquefaciens ck-05 using response surface methodology.	Liu X, John Martin JJ, Li X, Zhou L, Li R, Li Q, Zhang J, Fu D, Cao H.	Front Microbiol	10.3389/fmicb.2025.1552645	2025
	Effects of osthole and Bacillus amyloliquefaciens on the physiological growth of Panax quinquefolius in a forest.	Jiang J, Fan G, Wen R, Liu T, He S, Yang S, Zi S.	Front Microbiol	10.3389/fmicb.2024.1497987	2024
	Assessment of Hermetia illucens pupal exuviae fermented by Bacillus amyloliquefaciens as functional feed additive for red feather native chickens.	Chang CL, Chang SC, Lin LJ, Chang JS, Lin MJ, Lee TT.	Poult Sci	10.1016/j.psj.2025.105584	2025
	Fungal and bacterial species on biowaste workers' hands and inhalation zone, and potential airway deposition.	Madsen AM, Rasmussen PU, Frederiksen MW.	Waste Manag	10.1016/j.wasman.2024.05.018	2024
	Application of Plant Growth Promoting Rhizobacteria to Improve Soil Chemical and Biological Properties and Its Effect on Growth, Physiology and Yield of Okra (Abelmoschus esculentus L.).	Mustapha Z, Nasir NNNM, Lah MKC, Ngah N, Mohd KS, Othman R, Juahir H.	Trop Life Sci Res	10.21315/tlsr2025.36.2.4	2025
Enzymology	Isolation of Bacillus amyloliquefaciens D39 and Identification of Its Antimicrobial Proteins Active Against Chestnut Blight.	Deng T, Wang L, Zhu T.	Microorganisms	10.3390/microorganisms13061302	2025
	Discovering Ecological Interactions Between Biocontrol Bacterial Strains and Entomopathogenic Nematodes in Button Mushroom Production.	Potocnik I, Santric L, Lukovic J, Grujic N, Andelkovic N, Majic I, Drobnjakovic T, Marcic D, Milijasevic-Marcic S.	Microorganisms	10.3390/microorganisms13030505	2025
	Revealing the influence of exogenously inoculated Bacillus spp. on the microbiota and metabolic potential of medium-temperature Daqu: A meta-omics analysis	Qin H, Zhang S, Wang C, Pan Q, Dong Y, Cai X, Wang X, Huang M, Huang J, Zhou R.	Food Research International.		2024
	Inoculum density-dependent, additive effectiveness of fungicides or biofungicides with cultivar resistance for integrated management of Cercospora leaf spot on beet greens	Keinath AP.	Crop Prot		2024
	Inclusion of a Bacillus-based probiotic in non-starch polysaccharides-rich broiler diets.	Goodarzi Boroojeni F, Duangnumsawang Y, Jozefiak D, Pachocka M, Sandvang D, Zentek J.	Arch Anim Nutr	10.1080/1745039x.2023.2284530	2024
	Effects of spore-forming Bacillus probiotics on growth performance, intestinal morphology, and immune system of broilers housed on deep litter	Popov IV, Skripkin VS, Mazanko MS, Epimakhova EE, Prazdnova EV, Dilekova OV, Dannikov SP, Popov IV, Trukhachev VI, Rastovarov EI, Derezina TN, Kochetkova NA, Weeks RM, Ermakov AM, Chikindas ML.	Journal of applied poultry research.		2024
	Superoxide dismutase secreting Bacillus amyloliquefaciens spores attenuate pulmonary fibrosis.	Kim NH, Kim HY, Lee JH, Chang I, Heo SH, Kim J, Kim JH, Kang JH, Lee SW.	Biomed Pharmacother	10.1016/j.biopha.2023.115647	2023
	Characterization of levans produced by levansucrases from Bacillus amyloliquefaciens and Gluconobacter oxydans: Structural, techno-functional, and anti-inflammatory properties.	Sahyoun AM, Wong Min M, Xu K, George S, Karboune S.	Carbohydr Polym	10.1016/j.carbpol.2023.121332	2024
	Root Exudates Metabolic Profiling Confirms Distinct Defense Mechanisms Between Cultivars and Treatments with Beneficial Microorganisms and Phosphonate Salts Against Verticillium Wilt in Olive Trees.	Llorens E, Lopez-Moral A, Agusti-Brisach C.	Phytopathology	10.1094/phyto-10-23-0406-r	2024
	Bacillus amyloliquefaciens SQ-2 and Biochar: A Promising Combination for Enhancing Rice Growth in Pb/Al-Contaminated Acidic Soils.	Gao G, Li X, Ma J, Cui Y, Ying M, Huang L, Li M.	Microorganisms	10.3390/microorganisms13071556	2025
	Species-Level Monitoring of Key Bacteria in Fermentation Processes Using Single-Nucleotide Resolved Nucleic Acid Assays Based on CRISPR/Cas12.	Wang Y, Xia X, Wu M, Sun Q, Zhang W, Qiu Y, Deng R, Luo A.	J Agric Food Chem	10.1021/acs.jafc.3c04775	2023
	Impacts of Bacillus amyloliquefaciens and Trichoderma spp. on Pac Choi (Brassica rapa var. chinensis) grown in different hydroponic systems.	Plocek G, Rueda Kunz D, Simpson C.	Front Plant Sci	10.3389/fpls.2024.1438038	2024
	Optimistic effects of dual nano-encapsulated probiotics on breeders laying performance, intestinal barrier functions, immunity and resistance against Salmonella Typhimurium challenge.	Elabbasy MT, Kishawy ATY, Abdelaziz WS, Hassan AA, Nada HS, Elbhnsawy RA, Shosha AM, Ibrahim D, Eldemery F, Atwa SAE, Sherief WRIA, El-Shetry ES, Saleh AA, Ibrahim D.	Sci Rep	10.1038/s41598-025-05495-y	2025
	Safety evaluation of the food enzyme 4-alpha-glucanotransferase from the genetically modified Bacillus amyloliquefaciens strain MAS.	EFSA Panel on Food Enzymes (FEZ), Zorn H, Barat Baviera JM, Bolognesi C, Catania F, Gadermaier G, Greiner R, Mayo B, Mortensen A, Roos YH, Solano MLM, Sramkova M, Van Loveren H, Vernis L, Lunardi S, Andryszkiewicz M, Di Piazza G, Kovalkovicova N, Liu Y.	EFSA J	10.2903/j.efsa.2025.9420	2025
Biotechnology	Preventive and Curative Effects of Treatments to Manage Strawberry Root and Crown Rot Caused by Neopestalotiopsis rosae.	Acosta-Gonzalez U, Leyva-Mir SG, Silva-Rojas HV, Rebollar-Alviter A.	Plant Dis	10.1094/pdis-05-23-0958-re	2024
	Safety evaluation of an extension of use of the food enzyme alpha-amylase from the non-genetically modified Bacillus amyloliquefaciens strain AE-BAA.	EFSA Panel on Food Enzymes (FEZ), Zorn H, Barat Baviera JM, Bolognesi C, Catania F, Gadermaier G, Greiner R, Mayo B, Mortensen A, Roos YH, Solano MLM, Sramkova M, Van Loveren H, Vernis L, Cavanna D, di Piazza G, Liu Y.	EFSA J	10.2903/j.efsa.2024.9079	2024
	Efficient expression of a novel alpha-amylase for reduction of tobacco starch and smoke hazard.	Han Z, Hao J, Zou D, Sun Z, Zhang Z, Niu C, Lu Q, Huang K, Ye C, Wei X.	Front Microbiol	10.3389/fmicb.2025.1603337	2025
Phenotype	Influence of Heterodera glycines Virulence Phenotypes on the Performance of Nematode-Protectant Seed Treatments	Barizon J, Bissonnette K, Biggs M, Haafke A, Bish M.	J Nematol
	Improving the bacillomycin L production in Bacillus amyloliquefaciens by atmospheric and room-temperature plasma combined with Box-Behnken design.	Zhang A, Yang B, Ma Y, Li R, Zhou Z, Luo C, Zhang Y, Zhang Y, Dan Y, Sun Q.	Microb Cell Fact	10.1186/s12934-025-02774-1	2025
	Comparative effects of replacing soybean meal in feeds with processed soybean meal on intestinal health and growth of nursery pigs when fed pharmacological level of zinc.	Zheng L, Sung JY, Kim SW.	Anim Biosci	10.5713/ab.24.0767	2025
	Controlling mildew of tobacco leaf by Bacillus amyloliquefaciens ZH-2 and its effect on storage quality of tobacco leaf.	Zhou H, Yang Y, Jia T, Yu Y, Chen S, Qiu Y, Zhang R, Chen H.	Sci Rep	10.1038/s41598-025-90058-4	2025
	A Mitogen-Activated Protein Kinase Pathway Is Required for Bacillus amyloliquefaciens PMB05 to Enhance Disease Resistance to Bacterial Soft Rot in Arabidopsis thaliana.	Li AT, Liu SK, Li JR, Blanco SD, Tsai HW, Xie JX, Tsai YC, Tzean Y, Lin YH.	Plants (Basel)	10.3390/plants13182591	2024
	Biological control of tomato early blight in Pakistan using local rhizobacteria.	Riaz HM, Chohan S, Yuen GY, Abid M.	Pest Manag Sci	10.1002/ps.7872	2024
	Use of Bacillus spp. as beneficial fermentation microbes in baking.	Robles Hernandez MG, Gerlinsky M, Zhang JS, Ganzle MG.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2024.110646	2024
	Comparative analysis of granular starch hydrolysis and multi-structural changes by diverse alpha-amylases sources: Insights from waxy rice starch.	Chen R, Zhao J, Sui Z, Danino D, Corke H.	Food Chem	10.1016/j.foodchem.2024.138622	2024
	Enhancement of Tomato Growth Through Rhizobacteria and Biocontrol of Associated Diseases.	El Hjouji H, Qessaoui R, Chafiki S, Mayad EH, Houmairi H, Dari K, Bencharki B, Aassila H.	Life (Basel)	10.3390/life15070997	2025
Genetics	Comparative genome analysis of endophytic Bacillus amyloliquefaciens MR4: a potential biocontrol agent isolated from wild medicinal plant root tissue.	Yang K, Dai X, Maitikadir Z, Zhang H, Hao H, Yan C.	J Appl Genet	10.1007/s13353-024-00905-9	2024
	Cell immobilization for enhanced milk clotting enzyme production from Bacillus amyloliquefacien and cheese quality.	Karam EA, Hassan ME, Elattal NA, Kansoh AL, Esawy MA.	Microb Cell Fact	10.1186/s12934-024-02521-y	2024
	Mechanistic insights into yield enhancement of Chimonobambusa opienensis bamboo shoots driven by organic fertilizer combined with Azotobacter Chroococcum via soil nutrient-microbe-metabolite interactions.	Fan W, Li S, Zhang Z, Long Z, Yang X, Chen W, Song X, Zhao X, Guan F, Cao Y, Fan S, Hu S.	BMC Plant Biol	10.1186/s12870-025-07660-x	2025
	Soil oxytetracycline alters the effects of phosphate fertilisation and Bacillus amyloliquefaciens on the bacterial community of Medicago sativa rhizosphere	Zhang Z, He H, Han T, Tian X, Pang J, Lambers H.	Appl Soil Ecol		2023
	New 24-Membered Macrolactines from an Arctic Bacterium Bacillus amyloliquefaciens SCSIO 41392 and Their Anti-Pathogenicity Evaluation.	Song Y, Zhou Y, Cong M, Deng S, Chen Y, Pang X, Liu Y, Liao L, Yang L, Wang J.	Mar Drugs	10.3390/md22110484	2024
	Exploring the microbial diversity of novel misos with metagenomics	Kothe CI, Rasmussen JA, Mak SST, Gilbert MTP, Evans J.	Food Microbiology.		2024
	Plant growth-promoting bacteria as biological control agents for sustainable agriculture: targeting root-knot nematodes.	Mata AS, Cruz C, Gaspar JR, Abrantes I, Conceicao IL, Morais PV, Proenca DN.	Front Plant Sci	10.3389/fpls.2025.1567265	2025
	Bacillus amyloliquefaciens FG14 as a potential biocontrol strain against rusty root rot of Panax ginseng, and its impact on the rhizosphere microbial community	Wang J, Wang J, Liu T, Li X, Gao J, Jiang Y, Chen CQ.	Biol Control	10.1016/j.biocontrol.2023.105221	2023
	Nano-Bacillus amyloliquefaciens as a dietary intervention in nile tilapia (Oreochromis niloticus): Effects on resistance to Aeromonas hydrophila challenge, immune-antioxidant responses, digestive/absorptive capacity, and growth.	Hassanin ME, El-Murr A, El-Khattib AR, Abdelwarith AA, Younis EM, Metwally MMM, Ismail SH, Davies SJ, Abdel Rahman AN, Ibrahim RE.	Heliyon	10.1016/j.heliyon.2024.e40418	2024
	Innovative Strategies for Postharvest Disease Management in Fruits and Vegetables: A Comprehensive Treatise.	Ullah Q, Waqar M, Sajjad N, Awlqadr FH, Arshad MT, Maqsood S, Saglam K, Maqsood N, Hossain MS, Ikram A, Khomphet T, Gnedeka KT.	Food Sci Nutr	10.1002/fsn3.70850	2025
	Molecular Characterization of Bacterial Cellulose Producing Bacillus Strains Isolated From Soil.	Bektas I, Yildirim NB.	J Basic Microbiol	10.1002/jobm.70026	2025
	Revealing the influence of exogenously inoculated Bacillus spp. on the microbiota and metabolic potential of medium-temperature Daqu: A meta-omics analysis.	Qin H, Zhang S, Wang C, Pan Q, Dong Y, Cai X, Wang X, Huang M, Huang J, Zhou R.	Food Res Int	10.1016/j.foodres.2024.114152	2024
	Effects of Artificially Modified Microbial Communities on the Root Growth and Development of Tall Fescue in Nutrient-Poor Rubble Soil.	Luo Z, Han H, Yao H, Yan G, Bai J, Shi L, Pei X, Li J, Li Q.	Plants (Basel)	10.3390/plants13233307	2024
	Analyzing the pressure resistant, sublethal injury and resuscitable viable but non-culturable state population of Escherichia coli, Staphylococcus aureus, Bacillus amyloliquefaciens and Lactiplantibacillus plantarum under high pressure processing.	Yang D, Jiang Z, Meng Q, Wang S, Pan H, Rao L, Liao X.	Food Res Int	10.1016/j.foodres.2023.113336	2023
	Endophytic bacterial and fungal communities of mustard tuber (Brassica juncea var. tumida Tsen et Lee) and preliminary identification of glucosinolate-degrading strains	Li J, Bowman JP, Liu D, He Y, Chen X, Liu Y, He Z, Iqra, Yang J.	Lebensm Wiss Technol		2024
	Antagonistic effect of Bacillus and Pseudomonas combinations against Fusarium oxysporum and their effect on disease resistance and growth promotion in watermelon.	Yang D, Zhang X, Li Z, Chu R, Shah S, Wang X, Zhang X.	J Appl Microbiol	10.1093/jambio/lxae074	2024
Biotechnology	Efficacy of Organic Fungicides for Downy Mildew in Field-Grown Sweet Basil.	McGrath MT.	Plant Dis	10.1094/pdis-10-22-2424-re	2023
	Research on the Regulation of Plipastatin Production by the Quorum-Sensing ComQXPA System of Bacillus amyloliquefaciens.	Zhou J, Wu G, Zheng J, Abdalmegeed D, Wang M, Sun S, Sedjoah RA, Shao Y, Sun S, Xin Z.	J Agric Food Chem	10.1021/acs.jafc.3c03120	2023
	Multi-omics reveals different impact patterns of conventional and biodegradable microplastics on the crop rhizosphere in a biofertilizer environment.	Li X, Cheng X, Wu J, Cai Z, Wang Z, Zhou J.	J Hazard Mater	10.1016/j.jhazmat.2024.133709	2024
	Analysis of the action pattern of sequential alpha-amylases from B. stearothermophilus and B. amyloliquefaciens on highly concentrated soluble starch.	Wang Y, Dong J, Jin Z, Bai Y.	Carbohydr Polym	10.1016/j.carbpol.2023.121190	2023
	Identification and control of gas-producing bacteria isolated from the swollen bagged soy sauce.	Zhang X, Zhang Y, Wang L, Li W, Hou L.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2023.110396	2023
	Biodegradable microplastics reduce the effectiveness of biofertilizers by altering rhizospheric microecological functions.	Li X, Wu J, Cheng X, Cai Z, Wang Z, Zhou J.	J Environ Manage	10.1016/j.jenvman.2024.120071	2024
	Analysis of latrine fecal odor release pattern and the deodorization with composited microbial agent.	Lyu Q, Feng Z, Liu Y, Wang J, Xu L, Tian X, Yan Z, Ji G.	Waste Manag	10.1016/j.wasman.2024.02.044	2024
	Analysis of the action pattern of sequential alpha-amylases from B. stearothermophilus and B. amyloliquefaciens on highly concentrated soluble starch	Wang Y, Dong J, Jin Z, Bai Y.	Carbohydrate polymers.		2023
	C₁₅-bacillomycin D produced by Bacillus amyloliquefaciens 4-9-2 suppress Fusarium graminearum infection and mycotoxin biosynthesis.	Liu Z, Luo Y, Lin R, Li C, Zhao H, Aman HM, Wisal MA, Dong H, Liu D, Yu X, Kong L, Ma H.	Front Microbiol	10.3389/fmicb.2025.1599452	2025
	Antagonistic Effects and Volatile Organic Compound Profiles of Rhizobacteria in the Biocontrol of Phytophthora capsici.	Avila-Oviedo JL, Mendez-Inocencio C, Rodriguez-Torres MD, Angoa-Perez MV, Chavez-Aviles MN, Martinez-Mendoza EK, Oregel-Zamudio E, Villar-Luna E.	Plants (Basel)	10.3390/plants13223224	2024
	In silico and in vivo experiment of soymilk peptide (tetrapeptide - FFYY) for the treatment of hypertension.	Alauddin M, Amin MR, Siddiquee MA, Hiwatashi K, Shimakage A, Takahashi S, Shinbo M, Komai M, Shirakawa H.	Peptides	10.1016/j.peptides.2024.171170	2024
	Biocontrol ability and action mechanism of Bacillus amyloliquefaciens Baf1 against Fusarium incarnatum causing fruit rot in postharvest muskmelon (cv. Yugu) fruit	Liu J, Qin D, Huang W, Wang X, Li Y, Zhang R.	Lebensm Wiss Technol		2023
Transcriptome	Transcriptome analysis reveals the regulatory effects of Bacillus amyloliquefaciens and Bacillus pumilus on immune and digestive related genes in the spleen of weanling black goats.	Zhang N, Li J, Wang L, Wei Y, Emu Q, Xu F, Zhang L.	Funct Integr Genomics	10.1007/s10142-023-01025-z	2023
	Effects of endophytes on early growth and ascorbate metabolism in Brassica napus.	Jones-Held S, White JF.	Front Plant Sci	10.3389/fpls.2024.1480387	2024
	Enhanced meat chicken productivity in response to the probiotic Bacillus amyloliquefaciens H57 is associated with the enrichment of microbial amino acid and vitamin biosynthesis pathways.	Bajagai YS, Yeoh YK, Li X, Zhang D, Dennis PG, Ouwerkerk D, Dart PJ, Klieve AV, Bryden WL.	J Appl Microbiol	10.1093/jambio/lxad085	2023
	Efficient expression of gamma-glutamyl transpeptidase in Bacillus subtilis via CRISPR/Cas9n and its immobilization.	Chen Q, Wang B, Pan L.	Appl Microbiol Biotechnol	10.1007/s00253-023-12889-3	2024
	Protein Extraction from Chlorella pyrenoidosa Using Bacillus spp. Isolated from Jeotgal: Strain isolation, Characterization, and Fermentation.	Cho KJ, Kim MU, Jeong GJ, Oh DK, Kang JH, Yoon DH, Khan F, Kim YM.	J Microbiol Biotechnol	10.4014/jmb.2411.11070	2025
	Safety evaluation of the food enzyme bacillolysin from the genetically modified Bacillus amyloliquefaciens strain NPR.	EFSA Panel on Food Enzymes (FEZ), Zorn H, Barat Baviera JM, Bolognesi C, Catania F, Gadermaier G, Greiner R, Mayo B, Mortensen A, Roos YH, Solano MLM, Sramkova M, Van Loveren H, Vernis L, Andryszkiewicz M, Cavanna D, Peluso S, Gallo A, De Nijs R, Liu Y.	EFSA J	10.2903/j.efsa.2025.9220	2025
	Effects of Bacillus amyloliquefaciens FD777 and Macleaya cordata Extract on Performance, Immunity, Gastrointestinal System Microbiome, and Profitability in Holstein Calves.	Kucukoflaz M, Ozbek V, Guclu BK, Sariozkan S, Zaman CI, Aydin E, Makav M, Beyzi SB, Oztas SY, Akin MA.	Animals (Basel)	10.3390/ani15030313	2025
	Bioprotective potential of maize apoplastic fluid bacterium (Bacillus amyloliquefaciens) and arbuscular mycorrhizal fungi (Glomus intraradices) against Spodoptera frugiperda infestation in maize	Sellappan R, Thangavel K, Uthandi S.	Physiol Mol Plant Pathol		2023
	Fortifying plant fortresses: siderophores in defense against Cercospora leaf spot disease in Vigna radiata L.	Kamath A, Sharma A, Shukla A, Parmar P, Patel D.	Front Microbiol	10.3389/fmicb.2024.1492139	2024
	Adsorption mechanism of Cd²⁺ on microbial inoculant and its potential for remediation Cd-polluted farmland soils.	Yang W, Sun T, Sun Y.	Chemosphere	10.1016/j.chemosphere.2024.141349	2024
	Production of glutathione from probiotic Bacillus amyloliquefaciens KMH10 using banana peel extract.	Hilaluddin, Mondal S, Rakhshit S, Pal K, Santra S, Goswami D, Mondal SP, Halder SK, Mondal KC.	Bioresour Technol	10.1016/j.biortech.2023.128910	2023
	Response of continuous cropping cowpea and root-zone soil to composite microbial agents: plant growth promotion and nitrogen-fixing bacterial community regulation.	Zhu J, Chen J, Zhang J, Hou Q, Luo K, Li Y, Feng P.	BMC Plant Biol	10.1186/s12870-025-07583-7	2025
	Identification and characterization of beta3 integrin in Crassostrea hongkongensis	Tang L, Guo SQ, Hou TL, Fu YW, Zhang QZ.	Aquaculture	10.1016/j.aquaculture.2023.740452	2023
	Improving thermostability of Bacillus amyloliquefaciens alpha-amylase by multipoint mutations.	Yuan S, Yan R, Lin B, Li R, Ye X.	Biochem Biophys Res Commun	10.1016/j.bbrc.2023.02.064	2023
	Bacillus amyloliquefaciens TL promotes gut health of broilers by the contribution of bacterial extracellular polysaccharides through its anti-inflammatory potential.	Li S, Chen P, Li Q, Wang X, Peng J, Xu P, Ding H, Zhou Z, Shi D, Xiao Y.	Front Immunol	10.3389/fimmu.2024.1455996	2024
	Enhancing Enzyme Activity and Thermostability of Bacillus amyloliquefaciens Chitosanase BaCsn46A Through Saturation Mutagenesis at Ser196.	Jing G, Wenjun G, Yi W, Kepan X, Wen L, Tingting H, Zhiqiang C.	Curr Microbiol	10.1007/s00284-023-03281-5	2023
Genetics	Whole genome sequence analysis of Bacillus amyloliquefaciens strain S2.5 as a potential probiotic for feed supplement in livestock production.	Nguyen HA, Tran P T, Dam HT, Nguyen HV, Le TH, Ho PH, Lan Huong N.	J Genet Eng Biotechnol	10.1016/j.jgeb.2024.100404	2024
	Effect of microbial fertilizers on soil microbial community structure in rotating and continuous cropping Glycyrrhiza uralensis.	Qiu D, Wang X, Jiang K, Gong G, Bao F.	Front Plant Sci	10.3389/fpls.2024.1452090	2024
	Whole genome sequence analysis enabled affirmation of the probiotic potential of marine sporulater Bacillus amyloliquefaciens BTSS3 isolated from Centroscyllium fabricii.	D'Rose V, Bhat SG.	Gene	10.1016/j.gene.2023.147305	2023
Genetics	Bacillus sp. SW14 isolated from arid mangroves sediments enhances tomato plant growth: insights from genome analysis and greenhouse evaluation.	Sadaiappan B, Ali Q, Afridi M, Khan MA, Mundra S.	Front Plant Sci	10.3389/fpls.2025.1673790	2025
Phylogeny	Biocontrol efficacy of Bacillus licheniformis and Bacillus amyloliquefaciens against rice pathogens.	Tariq M, Zahoor M, Yasmeen T, Naqqash T, Rashid MAR, Abdullah M, Rafiq AR, Zafar M, Irfan I, Rasul I.	PeerJ	10.7717/peerj.18920	2025
	Sustainable management of blister and grey blight diseases of tea using antagonistic and plant growth promoting microbes in Western Ghats of India	Murugavel K, Karthikeyan G, Raveendran M, Sendhilvel V, Sudha A, Karthiba L, Venkatecan K, Nepolean P.	Crop Prot		2024
	[Effect of hemX gene deletion on heme synthesis in Bacillus amyloliquefaciens].	Liu J, Liu Y, Zhao C, Wang W, Li Q, Lu F, Li Y.	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.220504	2023
Transcriptome	Bio-organic fertilizer affects secondary cell wall biosynthesis of Dendrocalamus farinosus by inhibiting the phenylpropanoid metabolic pathway.	Li S, Cao Y, Wang B, Fan W, Hu S.	BMC Plant Biol	10.1186/s12870-024-05825-8	2024
	Alteration of the Rhizosphere Microbiota and Growth Performance of Barley Infected with Fusarium graminearum and Screening of an Antagonistic Bacterial Strain (Bacillus amyloliquefaciens).	Fu Y, Luan J, Shi J, Tang W, Li X, Yu Z, Yang F.	Microorganisms	10.3390/microorganisms13051010	2025
	Safety evaluation of an extension of use of the food enzyme bacillolysin from the non-genetically modified Bacillus amyloliquefaciens strain AE-NP.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Roos Y, Cavanna D, Liu Y, di Piazza G, Chesson A.	EFSA J	10.2903/j.efsa.2024.8868	2024
	Screening of Microbial Isolates from Tomato Plants (Solanum lycopersicum L.) for Bioprotective Potential: From Isolation to Food Model System Application.	Rabasco-Vilchez L, Bolivar A, Ruiz MJ, Harrazi N, Mounier J, Coton E, Medina LM, Perez-Rodriguez F.	Foods	10.3390/foods14213713	2025
	Efficient Stereochemical Analysis of Hydroxy Fatty Acids Using PGME and PAME Derivatization.	Um S, Lee J, Kim SH.	Anal Chem	10.1021/acs.analchem.5c01447	2025
	Rational Redesign of Chitosanase to Enhance Thermostability and Catalytic Activity to Produce Chitooligosaccharides with a Relatively High Degree of Polymerization.	Wu C, Yu X, Zheng P, Chen P, Wu D.	J Agric Food Chem	10.1021/acs.jafc.3c04542	2023
	Bacillus spore showcasing key antigens of African swine fever potentializes a promising oral vaccine candidate.	Wang X, Fan B, Zhu T, Shen H, Li L, Wang S, Yin X, Tian B, Zhang J, Li B, Luo C.	Appl Microbiol Biotechnol	10.1007/s00253-025-13511-4	2025
	Effects of characteristics of douchi during rapid fermentation and antioxidant activity using different starter cultures	Hou H, Zhou W, Guo L, Jia S, Zhang X, Wang L.	Journal of the Science of Food and Agriculture.		2023
	Pesticide effects of highly stable green synthesized silver nanocomposites to be used in organic tomato crops.	Trujillo LE, Landazuri P, Noceda C, Velasco J, Toapanta L, Criollo G, Poaquiza A, Barros F, Aguirre V, Izquierdo A, Chacon J, Morales Z, Debut A.	Sci Rep	10.1038/s41598-025-03101-9	2025
	Bacillus amyloliquefaciens Increases the GABA in Rice Seed for Upregulation of Type I Collagen in the Skin.	Zayabaatar E, Huang CM, Pham MT, Ganzorig B, Wang SM, Chen CC.	Curr Microbiol	10.1007/s00284-023-03233-z	2023
	Screening of rhizobacteria from monkey pod trees for plant growth promoters and evaluating the antifungal potential of the biosynthesized selenium nanoparticles.	Babajide AM, Adebami GE, Adebayo-Tayo BC.	Sci Rep	10.1038/s41598-025-96330-x	2025
	Assessing the efficacy of phyllospheric growth-promoting and antagonistic bacteria for management of black rot disease of cauliflower incited by Xanthomonas campestris pv. campestris.	Geat N, Singh D, Singh D, Saha P, Jatoth R, Babu PL.	Folia Microbiol (Praha)	10.1007/s12223-023-01106-3	2024
	Isolation of Bacillus amyloliquefaciens M13-RW0 from Soil and Evaluation of its Antifungal Activity.	Naghdifar S, Madani M, Shakib P.	Curr Drug Discov Technol	10.2174/1570163820666230419090347	2023
	Compatibility of Brazilian Strains of Trichoderma afroharzianum with Various Agricultural Inputs Under In Vitro Conditions.	Marques E, Silva MR, Soares WM, de Castro KHM, da Silva JG, da Silva KC, da Cunha MG.	J Fungi (Basel)	10.3390/jof11110812	2025
	Probiotic Potential of Bacillus amyloliquefaciens Isolated from Tibetan Yaks.	He Y, Li F, Zhang W, An M, Li A, Wang Y, Zhang Y, Fakhar-E-Alam Kulyar M, Iqbal M, Li J.	Probiotics Antimicrob Proteins	10.1007/s12602-022-10027-5	2024
	Probiotics and postbiotics: a promising prophylactic measure for American foulbrood and European foulbrood diseases of honey bees.	Mojgani N, Bagheri M, Ashique S, Hosseini SH, Hussain A, Moharrami M, Zahmatkesh A, Moradi M.	Vet Res Forum	10.30466/vrf.2025.2044129.4508	2025
Phylogeny	Root inoculation with soil-borne microorganisms alters gut bacterial communities and performance of the leaf-chewer Spodoptera exigua.	Ramirez-Serrano B, Querejeta M, Minchev Z, Pozo MJ, Dubreuil G, Giron D.	Environ Microbiol Rep	10.1111/1758-2229.70049	2024
	Bacillus amyloliquefaciens promotes cluster root formation of white lupin under low phosphorus by mediating auxin levels.	Yang J, Li S, Zhou X, Du C, Fang J, Li X, Zhao J, Ding F, Wang Y, Zhang Q, Wang Z, Liu J, Dong G, Zhang J, Xu F, Xu W.	Plant Physiol	10.1093/plphys/kiae676	2025
	Synthesis and application of a compound microbial inoculant for effective soil remediation.	Zhao S, Wang H, Wang J.	Environ Sci Pollut Res Int	10.1007/s11356-023-30887-w	2023
	Antibiotic Resistance Gene Expression in Veterinary Probiotics: Two Sides of the Coin.	Kerek A, Roman I, Szabo A, Pezsa NP, Jerzsele A.	Vet Sci	10.3390/vetsci12030217	2025
	Graphene oxide influences transfer of plasmid-mediated antibiotic resistance genes into plants.	Wu R, Fang J, Xiang X, Liu H, Zhu Y, Du S.	Sci Total Environ	10.1016/j.scitotenv.2023.168652	2024
Enzymology	Nano-enhanced defense: Titanium-enriched Alginate-Bentonite coating augments Bacillus amyloliquefaciens D203 efficacy against Magnaporthe oryzae in Kenyan rice cultivation.	Mirara F, Dzidzienyo DK, Mwangi M.	Heliyon	10.1016/j.heliyon.2024.e36141	2024
	Effect of Maternal Probiotic and Piglet Dietary Tryptophan Level on Performance and Piglet Intestinal Health Parameters Pre-Weaning.	Kiernan DP, O'Doherty JV, Ryan MT, Sweeney T.	Microorganisms	10.3390/microorganisms13061264	2025
	Comparative analysis of substrate affinity and catalytic efficiency of gamma-glutamyltransferase from bovine milk and Bacillus amyloliquefaciens.	Cao L, Li Q, Lametsch R.	Food Chem	10.1016/j.foodchem.2022.134930	2023
	Improving Resistance of Mango to Colletotrichum gloeosporioides by Activating Reactive Oxygen Species and Phenylpropane Metabolism of Bacillus amyloliquefaciens GSBa-1.	Li W, Chen H, Cheng J, Zhang M, Xu Y, Wang L, Zhao X, Zhang J, Liu B, Sun J.	Metabolites	10.3390/metabo14080417	2024
	In vitro analysis of probiotic characteristics of gut-associated bacteria from Solea solea.	Hussain N, Mirza AF, Muccee F, Haddad AHIA, Afzal MI.	Front Vet Sci	10.3389/fvets.2025.1581675	2025
Genetics	Comprehensive analysis of OsJAZ gene family deciphers rhizobacteria-mediated nutrient stress modulation in rice.	Bisht N, Anshu A, Singh PC, Chauhan PS.	Int J Biol Macromol	10.1016/j.ijbiomac.2023.126832	2023
	Isolation and identification of high-yielding alkaline phosphatase strain: a novel mutagenesis technique and optimization of fermentation conditions.	Bo L, Kang X, Chen Z, Zhao Y, Wu S, Li J, Bao S.	Prep Biochem Biotechnol	10.1080/10826068.2023.2188412	2023
	Safety evaluation of the food enzyme alpha-amylase from the non-genetically modified Bacillus amyloliquefaciens strain UN-01.	EFSA Panel on Food Enzymes (FEZ), Zorn H, Barat Baviera JM, Bolognesi C, Catania F, Gadermaier G, Greiner R, Mayo B, Mortensen A, Roos YH, Solano MLM, Sramkova M, Van Loveren H, Vernis L, Sanmartin L, Aguilera J, Andryszkiewicz M, Apergi K, Peluso S, di Piazza G, Liu Y.	EFSA J	10.2903/j.efsa.2024.9081	2024
	Antifungal Activity and Possible Mechanism of Bacillus amyloliquefaciens FX2 Against the Postharvest Apple Ring Rot Pathogen.	Li Q, Hou Z, Zhou D, Jia M, Lu S, Yu J.	Phytopathology	10.1094/phyto-02-22-0047-r	2022
Pathogenicity	Bacillus amyloliquefaciens B10 Alleviates the Immunosuppressive Effects of Deoxynivalenol and Porcine Circovirus Type 2 Infection.	Xiao H, Qin Z, Xu B, Long M, Wu Q, Guo X, Zhang H, Li Z, Wu W.	Toxins (Basel)	10.3390/toxins16010014	2023
Genetics	Improving acetoin production through construction of a genome-scale metabolic model.	Qian J, Wang Y, Liu X, Hu Z, Xu N, Wang Y, Shi T, Ye C.	Comput Biol Med	10.1016/j.compbiomed.2023.106833	2023
	Use of halotolerant Bacillus amyloliquefaciens RHF6 as a bio-based strategy for alleviating salinity stress in Lotus japonicus cv Gifu.	Castaldi S, Valkov VT, Ricca E, Chiurazzi M, Isticato R.	Microbiol Res	10.1016/j.micres.2022.127274	2023
	Optimization of Culture Conditions and Batch Process Control for the Augmented Production of Bacteriocin by Bacillus Species.	Elazzazy AM, Mobarki MO, Baghdadi AM, Bataweel NM, Al-Hejin AM.	Microorganisms	10.3390/microorganisms12040651	2024
Transcriptome	Bacillus amyloliquefaciens attenuates the intestinal permeability, oxidative stress and endoplasmic reticulum stress: transcriptome and microbiome analyses in weaned piglets.	Yuan J, Meng H, Liu Y, Wang L, Zhu Q, Wang Z, Liu H, Zhang K, Zhao J, Li W, Wang Y.	Front Microbiol	10.3389/fmicb.2024.1362487	2024
	Beneath the blooms: Unearthing the effect of rhizospheric bacteria on floral signals and pollinator preferences.	Magalhaes DM, Lourencao AL, Bento JMS.	Plant Cell Environ	10.1111/pce.14771	2024
	Feasibility of applying Bacillus amyloliquefaciens-derived solid state fermentation products into the hatch cabinet environment as a method to mitigate the microbial bloom during the hatching phase.	Rowland MC, Graham LE, Selby C, Forga AJ, Hargis BM, Vuong CN, Graham D.	Poult Sci	10.1016/j.psj.2025.105190	2025
	Nutrient-Driven Metabolic Activation and Microbial Restructuring Induced by Endophytic Bacillus in Blight-Affected Forest Soils.	Yang Q, Tan S, Niu A, Liu J, Zhou G.	Microorganisms	10.3390/microorganisms13071454	2025
	Endophytic bacteria with allelopathic potential regulate gene expression and metabolite production in host Casuarina equisetifolia.	Wang Y, Chen P, Lin Q, Zuo L, Li L.	Front Plant Sci	10.3389/fpls.2024.1435440	2024
	Bacillus amyloliquefaciens PMB05 Increases Resistance to Bacterial Wilt by Activating Mitogen-Activated Protein Kinase and Reactive Oxygen Species Pathway Crosstalk in Arabidopsis thaliana.	Chuang CY, Lin ST, Li AT, Li SH, Hsiao CY, Lin YH.	Phytopathology	10.1094/phyto-04-22-0134-r	2022
Transcriptome	Potential Utility of Bacillus amyloliquefaciens SFB-1 as a Biocontrol Agent for Sweetpotato Black Rot Caused by Ceratocystis fimbriata.	Gao F, Zhou X, Yang D, Chen J, Kgosi VT, Zhang C, Ma J, Tang W, Liang Z, Sun H.	Genes (Basel)	10.3390/genes15121540	2024
	Immobilization of Bacillus amyloliquefaciens protease "Neutrase" as hybrid enzyme inorganic nanoflower particles: A new biocatalyst for aldol-type and multicomponent reactions.	Mostafavi M, Mahmoodzadeh K, Habibi Z, Yousefi M, Brask J, Mohammadi M.	Int J Biol Macromol	10.1016/j.ijbiomac.2023.123140	2023
	Isolation and characterization of Bacillus amyloliquefaciens YL-1 with ochratoxin A degradation ability and biocontrol activity against Aspergillus westerdijkiae	Wang L, Hua X, Jing N, Ji T, Zhou C, Liu W, Lv B, Liu L, Chen Y.	Biol Control	10.1016/j.biocontrol.2022.105052	2022
	Effect of botanicals, organic nutrient sources, and bio-control agents on root-knot nematode (Meloidogyne incognita) infecting tomato.	G V, Machal M, Rana VS, Gowda Ap A, Kumar V, Shakil NA, Pervez R, Singh AK, Kumar R, Jaiman M, Pankaj.	Front Plant Sci	10.3389/fpls.2025.1602326	2025
	Antimicrobial resistance and antagonistic features of bivalve-associated Vibrio parahaemolyticus from the south-west coast of India.	Bhaskaran R, Ramachandra KSS, Peter R, Gopakumar ST, Gopalan MK, Mozhikulangara RR.	Environ Sci Pollut Res Int	10.1007/s11356-023-29924-5	2023
	Effects of characteristics of douchi during rapid fermentation and antioxidant activity using different starter cultures.	Hou H, Zhou W, Guo L, Jia S, Zhang X, Wang L.	J Sci Food Agric	10.1002/jsfa.12419	2023
Enzymology	Fusion of SARS-CoV-2 neutralizing LCB1 peptide with Bacillus amyloliquefaciens RNase improves antiviral efficacy.	Kostin NN, Bobik TV, Konovalova EV, Kocharovskaya MV, Simonova MA, Rushkevich NY, Mokrushina YA, Skryabin GA, Kalinin RS, Kovalchuk SI, Ziganshin RH, Kaluzhskiy LA, Gnedenko OV, Yablokov EO, Ivanov AS, Chernov AS, Kazakov VA, Khokhlova ON, Murashev AN, Hong S, Shramova EI, Schulga AA, Lyukmanova EN, Kirpichnikov MP, Smirnov IV, Belogurov AA, Rubtsov YP, Stepanov AV, Zhang H, Gabibov AG, Deyev SM.	Sci Rep	10.1038/s41598-025-12444-2	2025
Enzymology	Isolation and Purification of Bacillus amyloliquefaciens D1 Protease and Its Application in the Fermentation of Soybean Milk to Produce Large Amounts of Free Amino Acids.	Du L, Wang J, Chen W, Chen J, Zheng Q, Fang X, Liao Z.	Appl Biochem Biotechnol	10.1007/s12010-022-04133-x	2023
Metabolism	Bacillus amyloliquefaciens modulate sugar metabolism to mitigate arsenic toxicity in Oryza sativa L. var Saryu-52.	Joshi H, Mishra SK, Prasad V, Chauhan PS.	Chemosphere	10.1016/j.chemosphere.2022.137070	2023
	Safety evaluation of the food enzyme alpha-amylase from the non-genetically modified Bacillus amyloliquefaciens strain AE-BAA.	EFSA Panel on Food Enzymes (FEZ), Zorn H, Barat Baviera JM, Bolognesi C, Catania F, Gadermaier G, Greiner R, Mayo B, Mortensen A, Roos YH, Solano M, Sramkova M, Van Loveren H, Vernis L, Peluso S, Andryszkiewicz M, Apergi K, Cavanna D, di Piazza G, Liu Y.	EFSA J	10.2903/j.efsa.2024.9080	2024
Pathogenicity	Bacillus amyloliquefaciens SC06 attenuated high-fat diet induced anxiety-like behavior and social withdrawal of male mice by improving antioxidant capacity, intestinal barrier function and modulating intestinal dysbiosis.	Wang Y, Wang B, Zeng Z, Liu R, Tang L, Meng X, Li W.	Behav Brain Res	10.1016/j.bbr.2022.114172	2023
Genetics	Exploring the microbial diversity of novel misos with metagenomics.	Kothe CI, Rasmussen JA, Mak SST, Gilbert MTP, Evans J.	Food Microbiol	10.1016/j.fm.2023.104372	2024
	Polystyrene microplastics biodegradation by gut bacterial Enterobacter hormaechei from mealworms under anaerobic conditions: Anaerobic oxidation and depolymerization.	Kang MG, Kwak MJ, Kim Y.	J Hazard Mater	10.1016/j.jhazmat.2023.132045	2023
Transcriptome	Investigating the effects of biodegradable microplastics and copper ions on probiotic (Bacillus amyloliquefaciens): Toxicity and application.	Li R, Tao J, Huang D, Zhou W, Gao L, Wang X, Chen H, Huang H.	J Hazard Mater	10.1016/j.jhazmat.2022.130081	2023
	Degradation of marine crustacean shell wastes through single-stage co-fermentation using proteolytic and chitinolytic bacteria.	Vakkachan AP, Gopakumar ST, Janardhanan RK, Pootholathil S, Surendran S, Nair AV, Raveendran RK, Suresh G, Subramanian S, Pananghat V.	Environ Sci Pollut Res Int	10.1007/s11356-023-30355-5	2024
	Nutrient density and the collaborative impact of exogenous enzyme blend on the performance of broiler chicken.	Mun JY, Tajudeen H, Ha SH, Lee JH, Lokhande A, Ingale SL, Kim JS, Kim MJ.	Anim Biosci	10.5713/ab.24.0233	2025
Phylogeny	Stevia rebaudiana leaves fermented by Lactobacillus plantarum exhibit resistance to microorganisms and cancer cell lines in vitro: A potential sausage preservative.	Chai LJ, Lan T, Cheng Z, Zhang J, Deng Y, Wang Y, Li Y, Wang F, Piao M.	Food Chem	10.1016/j.foodchem.2023.137187	2024
	Extraction and characterization of cyclic lipopeptides with antifungal and antioxidant activities from Bacillus amyloliquefaciens.	Ren L, Yuan Z, Xie T, Wu D, Kang Q, Li J, Li J.	J Appl Microbiol	10.1111/jam.15791	2022
	Remodeling Bacillus amyloliquefaciens Cell Wall Rigidity to Reduce Cell Lysis and Increase the Yield of Heterologous Proteins.	Zhang J, Zhu B, Xu X, Liu Y, Li Q, Li Y, Lu F.	J Agric Food Chem	10.1021/acs.jafc.2c04454	2022
	Omics insights into Bacillus velezensis LMY3-5 defense against Botryosphaeria dothidea in kiwifruit.	Ren C, Liu Y, Su W, Han Z, Wu D, Li W.	Front Microbiol	10.3389/fmicb.2025.1633015	2025
	Enhanced poly-gamma-glutamic acid synthesis in Corynebacterium glutamicum by reconstituting PgsBCA complex and fermentation optimization.	Xu G, Wang J, Shen J, Zhu Y, Liu W, Chen Y, Zha J, Zhang X, Zhang X, Shi J, Koffas MAG, Xu Z.	Metab Eng	10.1016/j.ymben.2023.12.008	2024
	Optimization of Fermentation Conditions for Bacillus amyloliquefaciens JL54 and Preparation of Powder Through Spray Drying.	Zhao L, Wang Y, Pan M, Kong W, Wang H, Tan J.	Plants (Basel)	10.3390/plants14081263	2025
	Assessment of microbial biocontrol agent (BCA) viability to mechanical and thermal stress by simulating spray application conditions.	Grella M, Gioelli F, Marucco P, Zwertvaegher I, Mozzanini E, Pittarello M, Balsari P, Fountas S, Nuyttens D, Mezzalama M, Pugliese M.	Pest Manag Sci	10.1002/ps.7643	2023
	Volatile fatty acid production from primary and secondary sludges to support efficient nutrient management.	Diaz R, Goswami A, Clark HC, Michelson R, Goel R.	Chemosphere	10.1016/j.chemosphere.2023.138984	2023
Genetics	Growth promotion on maize and whole-genome sequence analysis of Bacillus velezensis D103.	Zhang Y, Zhang N, Bi X, Bi T, Baloch FB, Miao J, Zeng N, Li B, An Y.	Microbiol Spectr	10.1128/spectrum.01147-24	2024
	Safety evaluation of an extension of use of the food enzyme glutaminase from the non-genetically modified Bacillus amyloliquefaciens strain AE-GT.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Roos Y, Cavanna D, Liu Y, di Piazza G, Chesson A.	EFSA J	10.2903/j.efsa.2024.8867	2024
	Enhancement of Apostichopus japonicus peptide flavor through bacterial and enzyme co-fermentation (BECF) and the identification of novel antioxidant peptides in the fermented product.	Shu Z, Wang G, Jing Y, Jiao C, Sun L, Huang H, Li Y, Zhang J.	Food Chem X	10.1016/j.fochx.2025.102323	2025
Enzymology	Optimization, gene cloning, expression, and molecular docking insights for enhanced cellulase enzyme production by Bacillus amyloliquefaciens strain elh1.	El-Khamisi EF, Soliman EAM, El-Sayed GM, Nour SA, Abdel-Monem MO, Hassan MG.	Microb Cell Fact	10.1186/s12934-024-02454-6	2024
	Subtilisin from Bacillus amyloliquefaciens induces apoptosis in breast cancer cells through ubiquitin-proteasome-mediated tubulin degradation.	Singh N, Tapader R, Chatterjee S, Pal A, Pal A.	Int J Biol Macromol	10.1016/j.ijbiomac.2022.08.086	2022
	Comparison of polylactic acid biodegradation ability of Brevibacillus brevis and Bacillus amyloliquefaciens and promotion of PLA biodegradation by soytone.	Yu J, Kim PD, Jang Y, Kim SK, Han J, Min J.	Biodegradation	10.1007/s10532-022-09993-y	2022
	Protocol for Quantitative Estimation of Hydrogen Cyanide Production from Bacteria.	Pathak D, Sharma P, Govindasamy V, Suman A.	Bio Protoc	10.21769/bioprotoc.5441	2025
	Isolation and characterization of a new strain of Bacillus amyloliquefaciens and its effect on strawberry preservation	Ying T, Wu P, Gao L, Wang C, Zhang T, Liu S, Huang R.	Lebensm Wiss Technol	10.1016/j.lwt.2022.113712	2022
	Safety evaluation of a food enzyme containing bacillolysin and subtilisin activities from the non-genetically modified Bacillus amyloliquefaciens strain AR-383.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (EFSA CEP Panel), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Roos Y, Andryszkiewicz M, Cavanna D, Liu Y, Lunardi S, Pesce F, Chesson A.	EFSA J	10.2903/j.efsa.2024.8779	2024
	The role of chemical fertilizer reduction and different microbial inoculants on yield increase in lettuce cultivation.	Kitir Sen N, Kocaman A, Aydemir OE.	BMC Plant Biol	10.1186/s12870-025-06986-w	2025
	Mutualistic microbial community of Bacillus amyloliquefaciens and recombinant Yarrowia lipolytica co-produced lipopeptides and fatty acids from food waste.	Bai S, Qiao B, Hou ZJ, Gao GR, Cao CY, Cheng JS, Yuan YJ.	Chemosphere	10.1016/j.chemosphere.2022.136864	2023
	Secreting recombinant barnase by Lactococcus lactis and its application in reducing RNA from forages.	Ai Y, Li X, Wu X, Montalban-Lopez M, Zheng Z, Mu D, Mu D.	Enzyme Microb Technol	10.1016/j.enzmictec.2022.110191	2023
	Anticancer and Antioxidant Activities of Rhizospheric Soil Bacteria of Lophocereus marginatus.	Ramirez-Villalobos JM, Romo-Saenz CI, Quintanilla-Licea R, Tamez-Guerra P, Perez-Gonzalez O, Estupinan-Jimenez JR, Torres-Hernandez AD, Rodriguez-Garza NE, Rodriguez-Padilla C, Gomez-Flores R.	Int J Microbiol	10.1155/ijm/1349429	2025
	Screening and Genomic Analysis of Bacillus velezensis R12 as a Biocontrol Agent Against Fusarium oxysporum Causing Wilt in Longya Lily (Lilium brownii var. viridulum).	Guo H, Huang Y, Cheng Z, Zheng Q, Li Q, Zhan M, Ji H, Zhao K, Zhu D, Liu S.	Microorganisms	10.3390/microorganisms13112430	2025
Biotechnology	Synergistic Effects of Bacillus amyloliquefaciens SDTB009 and Difenoconazole on Fusarium Wilt of Tomato.	Xu X, Wang Y, Lei T, Sohail MA, Wang J, Wang H.	Plant Dis	10.1094/pdis-12-21-2650-re	2022
	Optimizing fermentation of Bacillus amyloliquefaciens 3-5 and determining disease suppression and growth in cucumber (Cucumis sativus)	Ma D, Yang C, Cai F, Cui L, Wang Y.	Biol Control		2022
	Development and application of a CRISPR-dCpf1 assisted multiplex gene regulation system in Bacillus amyloliquefaciens LB1ba02.	Xin Q, Wang B, Pan L.	Microbiol Res	10.1016/j.micres.2022.127131	2022
	Maize Root Exudates Recruit Bacillus amyloliquefaciens OR2-30 to Inhibit Fusarium graminearum Infection.	Xie S, Jiang L, Wu Q, Wan W, Gan Y, Zhao L, Wen J.	Phytopathology	10.1094/phyto-01-22-0028-r	2022
	Protein Hydrolysates from Pleurotus geesteranus Modified by Bacillus amyloliquefaciens gamma-Glutamyl Transpeptidase Exhibit a Remarkable Taste-Enhancing Effect.	Xia X, Fu Y, Ma L, Zhu H, Yu Y, Dai H, Han J, Liu X, Liu Z, Zhang Y.	J Agric Food Chem	10.1021/acs.jafc.2c03941	2022
Biotechnology	Recent advances and prospects of Bacillus amyloliquefaciens as microbial cell factories: from rational design to industrial applications.	Luo Z, Yan Y, Du S, Zhu Y, Pan F, Wang R, Xu Z, Xu X, Li S, Xu H.	Crit Rev Biotechnol	10.1080/07388551.2022.2095499	2023
	Effects of dietary Bacillus on foraging behavior, food consumption, digestive enzyme activity, and defecation outputs of the sea cucumber Apostichopus japonicus at low temperature: New insights into overwintering management	Ding P, Yu Y, Qiao Y, Wang X, Ding J, Chzhan I, Zhao C.	Aquaculture		2023
	Efficient production of extracellular alkaline protease in Bacillus amyloliquefaciens by host strain construction	Chen W, Li L, Ye C, Zhao Z, Huang K, Zou D, Wei X.	Lebensm Wiss Technol		2022
	Biocontrol of rusted root rot in Panax ginseng by a combination of extracts from Bacillus amyloliquefaciens YY8 crude protein and Enterobacteriaceae YY115 ethyl acetate.	Feng S, Zhao Y, Wang Q, Zhang J, Liang X, Fu Z, Li Y, Dong W, Ji W.	BMC Microbiol	10.1186/s12866-024-03475-2	2024
	Impact of Ecobiol plus ® feed additive on growth performance, physiological response, oxidative status and immunological status of Nile tilapia (Oreochromis niloticus) fingerlings challenged with Aeromonas hydrophila.	Omar AA, Assar DH, Shukry M, El-Ezz AA, Farrag FA, Abd El-Aziz WE, Moustafa EM.	BMC Vet Res	10.1186/s12917-025-04480-x	2025
	Exploring Bacillus amyloliquefaciens strain OM81 for the production of polyhydroxyalkanoate (PHA) bioplastic using olive mill wastewater.	Bacha S, Arous F, Chouikh E, Jaouani A, Gtari M, Charradi K, Attia H, Ghorbel D.	3 Biotech	10.1007/s13205-023-03808-4	2023
	Association of Bacillus subtilis and Bacillus amyloliquefaciens: minimizes the adverse effects of necrotic enteritis in the gastrointestinal tract and improves zootechnical performance in broiler chickens.	Rodrigues RA, Silva LAM, Brugnera HC, Pereira N, Casagrande MF, Makino LC, Braganca CRS, Schocken-Iturrino RP, Cardozo MV.	Poult Sci	10.1016/j.psj.2023.103394	2024
Pathogenicity	Bacillus amyloliquefaciens protects Nile tilapia against Aeromonas hydrophila infection and alleviates liver inflammation induced by high-carbohydrate diet.	Xu R, Ding FF, Zhou NN, Wang T, Wu HX, Qiao F, Chen LQ, Du ZY, Zhang ML.	Fish Shellfish Immunol	10.1016/j.fsi.2022.07.033	2022
	Biocontrol Ability of the Bacillus amyloliquefaciens Group, B. amyloliquefaciens, B. velezensis, B. nakamurai, and B. siamensis, for the Management of Fungal Postharvest Diseases: A Review.	Wang SY, Herrera-Balandrano DD, Wang YX, Shi XC, Chen X, Jin Y, Liu FQ, Laborda P.	J Agric Food Chem	10.1021/acs.jafc.2c01745	2022
	Evaluating the Therapeutic Potential of Superoxide Dismutase in a Rat Model of Wet Age-Related Macular Degeneration.	Jeong HC, Cho CS, Kim JH, Chang I, Kim JH.	FASEB Bioadv	10.1096/fba.2025-00087	2025
	Sequence composition and location of CRE motifs affect the binding ability of CcpA protein.	Li D, Guo J, Zhang Z, Liu Y, Lu F, Li Q, Liu Y, Li Y.	Int J Biol Macromol	10.1016/j.ijbiomac.2023.126407	2023
Biotechnology	Biological agents and plant growth regulator promote rice growth and regenerative capacity.	Zhou H, Liu L, Zhou J, He A, Wu Z.	BMC Plant Biol	10.1186/s12870-025-06751-z	2025
	A bioprocess optimization study to enhance the production of Menaquinone-7 using Bacillus subtilis MM26.	M M, C SD.	Microb Cell Fact	10.1186/s12934-025-02735-8	2025
	Characterization of a newly isolated biosurfactant fengycin produced by Heyndrickxia coagulans strain.	Stykova E, Bedlovicova Z, Surin Hudakova N, Karaffova V, Kalocsaiova K, Bhide M.	AMB Express	10.1186/s13568-025-01942-1	2025
	Effects of Dietary Supplementation with Bacillus amyloliquefaciens US573 on Intestinal Morphology and Gut Microbiota of European Sea Bass.	Chouayekh H, Farhat-Khemakhem A, Karray F, Boubaker I, Mhiri N, Abdallah MB, Alghamdi OA, Guerbej H.	Probiotics Antimicrob Proteins	10.1007/s12602-022-09974-w	2023
	[Induced biosynthesis of fengycin and surfactin in a strain of Bacillus amyloliquefaciens with oomyceticidal activity on zoospores of Phytophthora capsici].	Ley-Lopez N, Basilio Heredia J, San Martin-Hernandez C, Ibarra-Rodriguez JR, Angulo-Escalante MA, Garcia-Estrada RS.	Rev Argent Microbiol	10.1016/j.ram.2022.03.002	2022
	The Effects of Bacillus amyloliquefaciens SC06 on Behavior and Brain Function in Broilers Infected by Clostridium perfringens.	Chen S, Liu J, Luo S, Xing L, Li W, Gong L.	Animals (Basel)	10.3390/ani14111547	2024
	Reduced fungal protein acetylation mediates the antimicrobial activity of a rhizosphere bacterium against a phytopathogenic fungus.	Zhang YC, Zhan X, Chen JY, Yu DT, Zhang T, Zhang H, Duan CG.	Nat Commun	10.1038/s41467-025-60870-7	2025
	Fermentation optimization of surfactin production of Bacillus amyloliquefaciens HM618.	Liu S, Tang MH, Cheng JS.	Biotechnol Appl Biochem	10.1002/bab.2327	2023
	Effects of Biocontrol Agents Application on Soil Bacterial Community and the Quality of Tobacco.	Li Z, Chen Y, Ling A, Li H, Lin Z, Wang Y.	Curr Microbiol	10.1007/s00284-022-02937-y	2022
	Bacillus amyloliquefaciens LM-1 Affects Multiple Cell Biological Processes in Magnaporthe oryzae to Suppress Rice Blast	Liang M, Feng A, Wang C, Zhu X, Su J, Xu Z, Yang J, Wang W, Chen K, Chen B, Lin X, Feng J, Chen S.	Microorganisms		2024
Genetics	Comprehensive genomic and metabolomic analysis revealed the physiological characteristics and pickle like odor compounds metabolic pathways of Bacillus amyloliquefaciens ZZ7 isolated from fermented grains of Maotai-flavor baijiu.	Yang L, Zeng S, Zhou M, Li Y, Jiang Z, Cheng P, Zhang C.	Front Microbiol	10.3389/fmicb.2023.1295393	2023
	[Effects of deleting peptidoglycan hydrolase genes on the viable cell counts of Bacillus amyloliquefaciens and the yield of alkaline protease].	Xu X, Zhu B, Li X, Zhang J, Liu W, Lu F, Li Y.	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.210254	2022
	Systematic engineering of Bacillus amyloliquefaciens for efficient production of poly-gamma-glutamic acid from crude glycerol.	Zhu Y, Du S, Yan Y, Pan F, Wang R, Li S, Xu H, Luo Z.	Bioresour Technol	10.1016/j.biortech.2022.127382	2022
	Patterns of biogenic amine during broad bean paste fermentation: microbial diversity and functionality via Bacillus bioaugmentation	Luo Y, Li D, Liao H, Xia X.	Journal of the Science of Food and Agriculture.		2023
	Probiotic-Vaccine Synergy in Fish Aquaculture: Exploring Microbiome-Immune Interactions for Enhanced Vaccine Efficacy.	Tayyab M, Islam W, Waqas W, Zhang Y.	Biology (Basel)	10.3390/biology14060629	2025
	Design and construction of a Bacillus amyloliquefaciens cell factory for hyaluronic acid synthesis from Jerusalem artichoke inulin.	Ma Y, Qiu Y, Yu C, Li S, Xu H.	Int J Biol Macromol	10.1016/j.ijbiomac.2022.02.100	2022
	Entomopathogenic potential of Bacillus subtilis and Bacillus amyloliquefaciens strains against Musca domestica under controlled conditions	Torres MJ, Rocha VF, Petroselli G, Villena RR, Audisio MC.	Entomol Exp Appl	10.1111/eea.13186	2022
	Bacillus amyloliquefaciens strains control strawberry anthracnose through antagonistic activity and plant immune response intensification	Wu YM, Chen X, Wang F, Hsiao CY, Yang CY, Lin ST, Wu LH, Chen YK, Liang YS, Lin YH.	Biol Control	10.1016/j.biocontrol.2021.104592	2022
	Screening of bacterial endophytes of larch against Neofusicoccum laricinum and validation of their safety.	Liu Y, Han S, Song L, Li L, Wang H, Pan M, Tan J.	Microbiol Spectr	10.1128/spectrum.04112-23	2024
	Quick In Vitro Screening of PGPMs for Salt Tolerance and Evaluation of Induced Tolerance to Saline Stress in Tomato Culture.	Arminjon L, Lefort F.	Microorganisms	10.3390/microorganisms13020246	2025
	In vitro and In silico investigation deciphering novel antifungal activity of endophyte Bacillus velezensis CBMB205 against Fusarium oxysporum.	R V, Granada DL, Skariyachan S, P U, K S.	Sci Rep	10.1038/s41598-024-77926-1	2025
	Increase of Kokumi gamma-Glutamyl Peptides in Porcine Hemoglobin Hydrolysate Using Bacterial gamma-Glutamyltransferase.	Li Q, Zhang L, Lametsch R.	J Agric Food Chem	10.1021/acs.jafc.2c07045	2022
	Safety evaluation of the food enzyme bacillolysin from the non-genetically modified Bacillus amyloliquefaciens strain DP-Cyb74.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Herman L, Roos Y, Andryszkiewicz M, Apergi K, Kovalkovicova N, Liu Y, Lunardi S, di Piazza G, Chesson A.	EFSA J	10.2903/j.efsa.2024.8612	2024
	Artificial consortia of Bacillus amyloliquefaciens HM618 and Bacillus subtilis for utilizing food waste to synthetize iturin A.	Miao CH, Wang XF, Qiao B, Xu QM, Cao CY, Cheng JS.	Environ Sci Pollut Res Int	10.1007/s11356-022-21029-9	2022
	The Global Prevalence of Bacillus spp. in Milk and Dairy Products: A Systematic Review and Meta-Analysis	Sun T, Wang R, Sun Y, Zhang X, Ge C, Li Y.	Foods		2025
Pathogenicity	Oral probiotic administration attenuates postexercise inflammation in horses.	Jacobs RD, Grum D, Trible B, Ayala DI, Karnezos TP, Gordon ME.	Transl Anim Sci	10.1093/tas/txae124	2024
	Four Decades of Bacillus Biofertilizers: Advances and Future Prospects in Agriculture.	Wu X, Liu Y, Jia B, Tao L, Li H, Wang J, Yuan Z, Sun X, Yao Y.	Microorganisms	10.3390/microorganisms13010187	2025
Pathogenicity	In Vitro Evaluation of Aflatoxin B1 Detoxification by Lactobacillus, Pediococcus, and Bacillus Strains.	Rafai S, Moreno A, Cimbalo A, Vila-Donat P, Manyes L, Meca G.	Toxins (Basel)	10.3390/toxins17080403	2025
	Optimization of Liquid Fermentation of Acanthopanax senticosus Leaves and Its Non-Targeted Metabolomics Analysis.	Zhang R, Wang X, Xue J, Li X, Li Y, Ding Y, Feng Y, Zhang X, Su J, Chu X.	Molecules	10.3390/molecules29194749	2024
	Osmolyte-producing microbial biostimulants regulate the growth of Arachis hypogaea L. under drought stress.	Eswaran SUD, Sundaram L, Perveen K, Bukhari NA, Sayyed RZ.	BMC Microbiol	10.1186/s12866-024-03320-6	2024
	New Occurrence of Nigrospora oryzae Causing Leaf Blight in Ginkgo biloba in China and Biocontrol Screening of Endophytic Bacteria.	Tao Y, Yang C, Yu S, Fu F, Dai T.	Microorganisms	10.3390/microorganisms12112125	2024
Biotechnology	Exploring the potential of synthetic and biological fungicides for managing the fungus-farming ambrosia beetle Xylosandrus compactus.	Costanzo MB, Vitale A, Biondi A, Polizzi G, Gugliuzzo A.	PLoS One	10.1371/journal.pone.0329063	2025
	Control of Cucumber Powdery Mildew Using Resistant Cultivars and Organic Agricultural Materials.	Kim MJ, Kim YK, Park SH, Park JH, Hong SJ, Shim CK.	J Microbiol Biotechnol	10.4014/jmb.2409.09030	2024
	Expression of Ice Nucleation Protein in Bacillus amyloliquefaciens and Its Application in Food Freezing Process.	Song R, Jiang C, Zhu J, Liu J, Zhang L, Zuo J, Zheng W, Liu S, Huang Q, Wei X, Chen Y.	Foods	10.3390/foods12213896	2023
	Bacillus amyloliquefaciens SC06 alleviates the obesity of ob/ob mice and improves their intestinal microbiota and bile acid metabolism.	Zeng Z, Zhou Y, Xu Y, Wang S, Wang B, Zeng Z, Wang Q, Ye X, Jin L, Yue M, Tang L, Zou P, Zhao P, Li W.	Food Funct	10.1039/d1fo03170h	2022
	Novel Umami-, Salty-, and Kokumi-Enhancing gamma-Glutamyl Tripeptides Synthesized with the Bitter Dipeptides from Defatted Peanut Meal Protein Hydrolysate.	Tu J, Guo J, Dong H, Cheng P, Brennan C, Bai W, Zeng X, Yang J.	J Agric Food Chem	10.1021/acs.jafc.3c01467	2023
	Safety of the feed additive consisting of endo-1,4-beta-xylanase (produced with Trichoderma reesei CBS 143953), subtilisin (produced with Bacillus subtilis CBS 143946) and alpha-amylase (produced with Bacillus amyloliquefaciens CBS 143954) (Avizyme® 1505) for all poultry species (Danisco (UK) Ltd.).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Durjava M, Dusemund B, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Villa RE, Woutersen R, Glandorf B, Anguita M, Innocenti ML, Pettenati E.	EFSA J	10.2903/j.efsa.2024.8797	2024
	Bacillus amyloliquefaciens as an excellent agent for biofertilizer and biocontrol in agriculture: An overview for its mechanisms.	Luo L, Zhao C, Wang E, Raza A, Yin C.	Microbiol Res	10.1016/j.micres.2022.127016	2022
	Integrative analysis of transcriptome and metabolome reveals the mechanism of foliar application of Bacillus amyloliquefaciens to improve summer tea quality (Camellia sinensis).	Huang X, Tang Q, Li Q, Lin H, Li J, Zhu M, Liu Z, Wang K.	Plant Physiol Biochem	10.1016/j.plaphy.2022.06.016	2022
	Screening and identification of an aflatoxin B₁-degrading strain from the Qinghai-Tibet Plateau and biodegradation products analysis.	Tang Y, Liu X, Dong L, He S.	Front Microbiol	10.3389/fmicb.2024.1367297	2024
	Prevalence of Neofusicoccum parvum Associated with Fruit Rot of Mango in South Italy and Its Biological Control Under Postharvest Conditions.	Vecchio L, Vitale A, Aiello D, Di Pietro C, Parafati L, Polizzi G.	J Fungi (Basel)	10.3390/jof11050384	2025
	Tempo-spatial dynamics of physicochemical properties and microbial communities in high-temperature Daqu during the fermentation process.	Wei YH, Wen Z, Yao SJ, Cheng PY, Huang W, Jiang LL, Bai M, Han DY, Song L, Zhu HY, Bai FY, Wang DQ, Han PJ.	Food Chem X	10.1016/j.fochx.2025.102815	2025
	Acid tolerant bacterium Bacillus amyloliquefaciens MBNC retains biocontrol efficiency against fungal phytopathogens in low pH.	Chowdhury N, Hazarika DJ, Goswami G, Sarmah U, Borah S, Boro RC, Barooah M.	Arch Microbiol	10.1007/s00203-021-02741-5	2022
	Potential of an endophytic bacteria Bacillus amyloliquefaciens 3-5 as biocontrol agent against potato scab.	Cui L, Yang C, Wang Y, Ma T, Cai F, Wei L, Jin M, Osei R, Zhang J, Tang M.	Microb Pathog	10.1016/j.micpath.2021.105382	2022
	Footprint of Domestic Processing on Safety and Functional Properties of Italian Black Garlic	Addazii D, Cevoli C, Casciano F, Ferioli F, Gallina Toschi T, Gianotti A, Nissen L.	Foods		2025
	Co-culture of Bacillus amyloliquefaciens and recombinant Pichia pastoris for utilizing kitchen waste to produce fengycins.	Wang XF, Miao CH, Qiao B, Xu SJ, Cheng JS.	J Biosci Bioeng	10.1016/j.jbiosc.2022.02.009	2022
	Cations and surfactin serving as signal molecules trigger quorum sensing in Bacillus amyloliquefaciens.	Liu N, Chen B, Zhao X, Wen J, Qi G.	J Basic Microbiol	10.1002/jobm.202100315	2022
	Antimicrobial Metabolites Isolated from Some Marine Bacteria Associated with Callyspongia crassa Sponge of the Red Sea.	Alahmari AN, Hassoubah SA, Alaidaroos BA, Al-Hejin AM, Bataweel NM, Farsi RM, Algothmi KM, Alshammari NM, Ashour ATK.	Microorganisms	10.3390/microorganisms13071552	2025
	Multiple linear regression models to simulate spore yields of Bacillus amyloliquefaciens BS13 through optimization of medium composition.	Kamoun F, Weekers F, Ayed RB, Mechri S, Jabeur F, Thonart P, Jaouadi B.	Biotechnol Appl Biochem	10.1002/bab.2315	2022
Biotechnology	Calcium ion biorecovery from industrial wastewater by Bacillus amyloliquefaciens DMS6.	Li D, Zhao H, Li G, Yan H, Han Z, Chi X, Meng L, Wang J, Xu Y, Tucker ME.	Chemosphere	10.1016/j.chemosphere.2022.134328	2022
	Alleviative mechanisms of silicon solubilizing Bacillus amyloliquefaciens mediated diminution of arsenic toxicity in rice.	Bist V, Anand V, Srivastava S, Kaur J, Naseem M, Mishra S, Srivastava PK, Tripathi RD, Srivastava S.	J Hazard Mater	10.1016/j.jhazmat.2021.128170	2022
	Investigation of the anti-Huanglongbing effects using antimicrobial lipopeptide and phytohormone complex powder prepared from Bacillus amyloliquefaciens MG-2 fermentation.	Ding Z, Liu Y, Zhang S, Wang F, Zong Q, Yang Y, Du A, Zheng Y, Zhu J, Jiang L.	Front Microbiol	10.3389/fmicb.2024.1458051	2024
	Improved the lipopeptide production of Bacillus amyloliquefaciens HM618 under co-culture with the recombinant Corynebacterium glutamicum producing high-level proline.	Chen XY, Sun HZ, Qiao B, Miao CH, Hou ZJ, Xu SJ, Xu QM, Cheng JS.	Bioresour Technol	10.1016/j.biortech.2022.126863	2022
	Potassium Phosphite Enhances the Antagonistic Capability of Bacillus amyloliquefaciens to Manage Tomato Bacterial Wilt.	Su L, Qiu P, Fang Z, Sun J, Mo X, Liu Y, Kuramae EE, Zhang R, Shen B, Shen Q.	Plant Dis	10.1094/pdis-08-21-1601-re	2022
	Safety evaluation of the food enzyme bacillolysin from the non-genetically modified Bacillus amyloliquefaciens strain AE-NP.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Roos Y, Andryszkiewicz M, Cavanna D, Lunardi S, Pesce F, Chesson A.	EFSA J	10.2903/j.efsa.2024.8710	2024
	Isolation of 60 strains from fermented milk of mares and donkeys in Algeria and identification by 16S rRNA sequencing of lactobacilli: Assessment of probiotic skills of important strains and aromatic productivity power.	Benameur F, Belkaaloul K, Kheroua O.	Vet World	10.14202/vetworld.2024.829-841	2024
	Exploring the Antifungal Activity of Moroccan Bacterial and Fungal Isolates and a Strobilurin Fungicide in the Control of Cladosporium fulvum, the Causal Agent of Tomato Leaf Mold Disease.	Belabess Z, Gajjout B, Legrifi I, Barka EA, Lahlali R.	Plants (Basel)	10.3390/plants13162213	2024
Pathogenicity	Surfactin Mitigates Dextran Sodium Sulfate-Induced Colitis and Behavioral Disorders in Mice by Mediating Gut-Brain-Axis Balance.	Chen X, Zhao H, Lu Y, Meng F, Lu Z, Lu Y.	J Agric Food Chem	10.1021/acs.jafc.2c07369	2023
	Safety evaluation of the food enzyme glutaminase from the non-genetically modified Bacillus amyloliquefaciens strain AE-GT.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Silano V, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lambre C, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Andryszkiewicz M, Cavanna D, Liu Y, Lunardi S, Nielsen E, Norby K, di Piazza G, Roos Y, Chesson A.	EFSA J	10.2903/j.efsa.2024.8618	2024
	Whole Genome Sequencing of Bacillus velezensis AMR25, an Effective Antagonist Strain against Plant Pathogens.	Ananev AA, Ogneva ZV, Nityagovsky NN, Suprun AR, Kiselev KV, Aleynova OA.	Microorganisms	10.3390/microorganisms12081533	2024
	Selenium and Bacillus proteolyticus SES synergistically enhanced ryegrass to remediate Cu-Cd-Cr contaminated soil.	Nie M, Wu C, Tang Y, Shi G, Wang X, Hu C, Cao J, Zhao X.	Environ Pollut	10.1016/j.envpol.2023.121272	2023
	Evaluation of the Antifungal and Biochemical Activities of Fungicides and Biological Agents against Ginseng Sclerotinia Root Rot Caused by Sclerotinia nivalis.	Feng S, Wang C, Xu Z, Dou B, Wang X, Yang L, Lu B, Gao J.	Microorganisms	10.3390/microorganisms12091761	2024
	Bacillus subtilis and Bacillus amyloliquefaciens Mix Suppresses Rhizoctonia Disease and Improves Rhizosphere Microbiome, Growth and Yield of Potato (Solanum tuberosum L.).	Maslennikova VS, Tsvetkova VP, Shelikhova EV, Selyuk MP, Alikina TY, Kabilov MR, Dubovskiy IM.	J Fungi (Basel)	10.3390/jof9121142	2023
	Interactive effects between soil properties and bacterial communities in tomato rhizosphere under the application of microbial agents	Wei L, Zhao D, Guo L, Guo J, Zhu J, Pei Y, Guan P, Guo Z, Cui H, Gao J, Li Y, Zhang L, Wang F, Liu P.	PeerJ		2025
	Lipopeptides from Bacillus: unveiling biotechnological prospects-sources, properties, and diverse applications.	Saiyam D, Dubey A, Malla MA, Kumar A.	Braz J Microbiol	10.1007/s42770-023-01228-3	2024
	Biosorption and adsorption isotherm of chromium (VI) ions in aqueous solution using soil bacteria Bacillus amyloliquefaciens.	Ramachandran G, Chackaravarthi G, Rajivgandhi GN, Quero F, Maruthupandy M, Alharbi NS, Kadaikunnan S, Khaled JM, Li WJ.	Environ Res	10.1016/j.envres.2022.113310	2022
Phylogeny	Diversity of Phosphorus-Solubilizing Microbes Isolated From Different Cropping Systems of Zimbabwe for Use as Biofertilizers With Rock Phosphate.	Kanonge G, Chiduwa MS, Muchaonyerwa P.	Microbiologyopen	10.1002/mbo3.70065	2025
	Performance and Health Parameters of Sows and Their Litters Using a Probiotic Supplement Composed of Bacillus subtilis 541 and Bacillus amyloliquefaciens 516.	Barbosa AMS, Carvalho MPS, Naves LP, da Motta SAB, Chaves RF, Resende M, Lima D, Hansen LHB, Cantarelli VS.	Animals (Basel)	10.3390/ani14233511	2024
	Diversity of Antimicrobial Peptide Genes in Bacillus from the Andaman and Nicobar Islands: Untapped Island Microbial Diversity for Disease Management in Crop Plants.	Sakthivel K, Manigundan K, Sharma SK, Singh R, Das MM, Devi V, Gautam RK, Nakkeeran S, Kumar A.	Curr Microbiol	10.1007/s00284-022-03086-y	2022
Genetics	Harnessing Bacillus amyloliquefaciens for Amazake Production: Comparison with Aspergillus oryzae Amazake for Metabolomic Characteristics, Microbial Diversity, and Sensory Profile.	Touceda-Suarez A, Touceda-Suarez M, Arboleya JC, Sorensen PM.	Foods	10.3390/foods13132012	2024
Genetics	Draft genome sequence of a lipopeptide-producing Bacillus amyloliquefaciens strain isolated from wheat field soil with antagonistic activity against azole-resistant Fusarium graminearum.	Wang Y, Xu J, Shi J, Ma G, Wang G.	J Glob Antimicrob Resist	10.1016/j.jgar.2021.12.014	2022
	Plant resistance to tomato yellow leaf curl virus is enhanced by Bacillus amyloliquefaciens Ba13 through modulation of RNA interference.	Guo Q, Sun Y, Ji C, Kong Z, Liu Z, Li Y, Li Y, Lai H.	Front Microbiol	10.3389/fmicb.2023.1251698	2023
	Dietary Effects of Probiotic Bacteria, Bacillus amyloliquefaciens AV5 on Growth, Serum and Mucus Immune Response, Metabolomics, and Lipid Metabolism in Nile Tilapia (Oreochromis niloticus).	Shija VM, Zakaria GE, Amoah K, Yi L, Huang J, Masanja F, Yong Z, Cai J.	Aquac Nutr	10.1155/2024/4253969	2024
Enzymology	Bacillus amyloliquefaciens 35 M can exclusively produce and secrete proteases when cultured in soybean-meal-based medium.	Xie F, Feng F, Liu D, Quan S, Liu L, Zhang X, Chen G.	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2021.112188	2022
Biotechnology	Microbial risk assessment of dairy products from retail marketplaces in Basrah province, Iraq.	Aldeewan AB, Jaber NN, Abdulhameed MF, Abbas BA.	Open Vet J	10.5455/ovj.2024.v14.i3.4	2024
Biotechnology	Bacillus amyloliquefaciens: Harnessing Its Potential for Industrial, Medical, and Agricultural Applications-A Comprehensive Review.	Zalila-Kolsi I, Ben-Mahmoud A, Al-Barazie R.	Microorganisms	10.3390/microorganisms11092215	2023
	Synthesis and characterization of lactide from Bacillus amyloliquefaciens brewed lactic acid utilizing cheap agricultural sources.	Balasubramanian VK, Balakrishnan M, Murugan K, John Kennedy JPK, Chou JY, Muthuramalingam JB.	3 Biotech	10.1007/s13205-023-03855-x	2024
	Soybean growth-promotion and Heterodera glycines suppression in two application methods of Bacillus strains	Dalvan do Nascimento D, Rodrigues M, Junior Ferreira R, Marchioro V, Macedo da Silva E, Alberto Silva Junior C, Cristina Kupper K, Antonio Polanczyk R, Luiz Martins Soares P.	Biol Control	10.1016/j.biocontrol.2022.105039	2022
	Plant-associated halotolerant bacteria improving growth of Vicia faba L. Mariout-2 under salinity conditions.	Wael D, El-Amier Y, Saber WIA, Elsayed A.	Sci Rep	10.1038/s41598-024-66504-0	2024
	Sensitivity of family GH11 Bacillus amyloliquefaciens xylanase A (BaxA) and the T33I mutant to Oryza sativa xylanase inhibitor protein (OsXIP): An experimental and computational study.	Liu M, Li J, Rehman AU, Luo S, Wang Y, Wei H, Zhang K.	Enzyme Microb Technol	10.1016/j.enzmictec.2022.109998	2022
	Architecture and physico-chemical properties of Bacillus amyloliquefaciens L-17 pellicle formed at the air-liquid interface.	Zaidi-Ait Salem M, Nait Chabane Y, Girbal-Neuhauser E.	J Biosci Bioeng	10.1016/j.jbiosc.2021.07.010	2021
	Chitooligosaccharide enhanced the efficacy of Bacillus amyloliquefaciens CAS02 for the control of tobacco black shank.	Zeng X, Zhang X, Peng B, Xie B, Yuan Y, Yao H, You X, Wei J, Li Y.	Front Microbiol	10.3389/fmicb.2023.1296916	2023
	Formation of a Novel Antagonistic Bacterial Combination to Enhance Biocontrol for Cucumber Fusarium Wilt.	Yang F, Wang X, Jiang H, Chang X, Chen W, Shi G, Tian B, Yao Q.	Microorganisms	10.3390/microorganisms13010133	2025
	Investigation on bio-desilication process of fly ash based on a self-screened strain of Bacillus amyloliquefaciens and its metabolites.	Guo Y, Teng Q, Yang Z, Sun B, Liu S.	J Biotechnol	10.1016/j.jbiotec.2021.09.016	2021
	Ginsenosides and Polysaccharides from Ginseng Co-Fermented with Multi-Enzyme-Coupling Probiotics Improve In Vivo Immunomodulatory Effects.	Bai S, Zhang G, Han Y, Ma J, Bai B, Gao J, Zhang Z.	Nutrients	10.3390/nu15112434	2023
	Biodegradation of the Pesticides Bifenthrin and Fipronil by Bacillus Isolated from Orange Leaves.	Viana JG, Birolli WG, Porto ALM.	Appl Biochem Biotechnol	10.1007/s12010-022-04294-9	2023
	Solid-state fermentation improves the quality of chrysanthemum waste as an alternative feed ingredient.	Cui Y, Peng S, Deng D, Yu M, Tian Z, Song M, Luo J, Ma X, Ma X.	J Environ Manage	10.1016/j.jenvman.2022.117060	2023
	The discovery and enzymatic characterization of a novel AA10 LPMO from Bacillus amyloliquefaciens with dual substrate specificity.	Guo X, An Y, Jiang L, Zhang J, Lu F, Liu F.	Int J Biol Macromol	10.1016/j.ijbiomac.2022.01.110	2022
	Trichoderma enriched compost, BCAs and potassium phosphite control Fusarium wilt of lettuce without affecting soil microbiome at genus level	Bellini A, Gilardi G, Idbella M, Zotti M, Pugliese M, Bonanomi G, Gullino ML.	Appl Soil Ecol		2022
	Biological Control of Root Rot of Strawberry by Bacillus amyloliquefaciens Strains CMS5 and CMR12.	Yang R, Liu P, Ye W, Chen Y, Wei D, Qiao C, Zhou B, Xiao J.	J Fungi (Basel)	10.3390/jof10060410	2024
	Ultrafast synthesis of laccase-copper phosphate hybrid nanoflowers for efficient degradation of tetracycline antibiotics.	Han Z, Wang H, Zheng J, Wang S, Yu S, Lu L.	Environ Res	10.1016/j.envres.2022.114690	2023
Pathogenicity	Induction of drought tolerance in Pennisetum glaucum by ACC deaminase producing PGPR- Bacillus amyloliquefaciens through Antioxidant defense system.	Murali M, Singh SB, Gowtham HG, Shilpa N, Prasad M, Aiyaz M, Amruthesh KN.	Microbiol Res	10.1016/j.micres.2021.126891	2021
	Microbial Inoculation Strategies for Optimal Cherry Tomato Production.	Silva TD, Ferrarezi RS, Selari PJRG, da Silva JLB, da Silva MV, Mesquita M, de Oliveira HFE.	Physiol Plant	10.1111/ppl.70655	2025
	Antibacterial Activities of Bacillus amyloliquefaciens DQB-1 Isolated From the Cecum of Dezhou Donkeys	Chen N, Liu Y, Qin P, Li Y, Ma D, Li J, Shi T, Zhu Z.	J Equine Vet Sci		2021
	Enhancement of S-adenosylmethionine production by deleting thrB gene and overexpressing SAM2 gene in Bacillus amyloliquefaciens	Jiang C, Ruan L, Wei X, Guo A.	Biotechnol Lett		2021
Enzymology	Identification and Activity Characterization of gamma-Glutamyltransferase from Bovine Milk.	Cao L, Li Q, Lametsch R.	J Agric Food Chem	10.1021/acs.jafc.1c06139	2021
Phylogeny	Development of the degradation bacteria in household food waste and analysis of the microbial community in aerobic composting.	Jin Z, Lu T, Feng W, Jin Q, Wu Z, Yang Y.	Biotechnol Appl Biochem	10.1002/bab.2385	2023
	Improvement of 1-deoxynojirimycin production of Bacillus amyloliquefaciens by gene overexpression and medium optimization	Lu Y, Cheng X, Deng H, Chen S, Ji Z.	Lebensm Wiss Technol		2021
	Biomimetic Assembly of Spore@ZIF-8 Microspheres for Vaccination.	Peng F, Xiang Y, Wang H, Hu Y, Zhou R, Hu Y.	Small	10.1002/smll.202204011	2022
	Bacillus strains prevent lipopolysaccharide-induced inflammation in gut and blood of male mice.	Pesarico AP, Jesus GFA, Corneo E, Borges HM, Calixto KV, Garcez ML, Bellettini-Santos T, Voytena APL, Rossetto M, Ramlov F, Dal-Pizzol F, Michels M.	J Appl Microbiol	10.1093/jambio/lxac021	2023
	Complete Genome Sequence of Bacillus amyloliquefaciens KNU-28 Isolated from Peach Leaves (Prunus Persica [L.] Batsch).	Kim MJ, Park T, Jeong M, Lee G, Jung DR, Shin JH.	Microbiol Resour Announc	10.1128/mra.00734-22	2022
	Antioxidant and Antiradical Properties of Probiotic Strains Bacillus amyloliquefaciens ssp. plantarum.	Safronova LS, Skorochod IA, Ilyash VM.	Probiotics Antimicrob Proteins	10.1007/s12602-021-09827-y	2021
	Biocontrol agents from cucurbit plants infected with Xanthomonas cucurbitae for managing bacterial spot of pumpkin	Sulley S, Babadoost M, Hind SR.	Biol Control	10.1016/j.biocontrol.2021.104757	2021
	Multi-omics analyses of Bacillus amyloliquefaciens treated mice infected with Schistosoma japonicum reveal dynamics change of intestinal microbiome and its associations with host metabolism.	Chen H, Huang S, Yao S, Wang J, Huang J, Yu Z.	PLoS Negl Trop Dis	10.1371/journal.pntd.0012583	2024
	Safety evaluation of the food enzyme bacillolysin from the non-genetically modified Bacillus amyloliquefaciens strain NZYM-NB.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Herman L, Roos Y, Andryszkiewicz M, Cavanna D, Lunardi S, Marini E, Pesce F, Chesson A.	EFSA J	10.2903/j.efsa.2024.8615	2024
	Polyketide-derived macrobrevins from marine macroalga-associated Bacillus amyloliquefaciens as promising antibacterial agents against pathogens causing nosocomial infections.	Chakraborty K, Kizhakkekalam VK, Joy M.	Phytochemistry	10.1016/j.phytochem.2021.112983	2022
Metabolism	Novel amylomacins from seaweed-associated Bacillus amyloliquefaciens as prospective antimicrobial leads attenuating resistant bacteria.	Chakraborty K, Kizhakkekalam VK, Joy M, Chakraborty RD.	World J Microbiol Biotechnol	10.1007/s11274-021-03161-9	2021
	Accelerated degradation of cellulose in silkworm excrement by the interaction of housefly larvae and cellulose-degrading bacteria.	Li H, Xu X, Zhang M, Zhang Y, Zhao Y, Jiang X, Xin X, Zhang Z, Zhang R, Gui Z.	J Environ Manage	10.1016/j.jenvman.2022.116295	2022
	Fermented chrysanthemum stem as a source of natural phenolic compounds to alleviate tomato bacterial wilt disease.	Ren P, Chen P, Guo S, Mei X, Jiang G, Yang T, Wang X, Xu Y, Shen Q, Wei Z.	Hortic Res	10.1093/hr/uhaf027	2025
Transcriptome	Transcriptomic analysis of the response of Avena sativa to Bacillus amyloliquefaciens DGL1.	Yang X, Xie Y, Wang T, Qiao Y, Li J, Wu L, Gao Y.	Front Microbiol	10.3389/fmicb.2024.1321989	2024
	Integrated multi-omics reveals the Bacillus amyloliquefaciens BA40 against Clostridium perfringens infection in weaned piglets.	Jiang Z, Su W, Yang M, Fu J, Gong T, Li W, Wen C, Wang X, Wang F, Jin M, Wang Y, Lu Z.	J Adv Res	10.1016/j.jare.2025.01.033	2025
	Antimicrobial Activity of Bacillus amyloliquefaciens BS4 against Gram-Negative Pathogenic Bacteria.	Palacios-Rodriguez AP, Espinoza-Culupu A, Duran Y, Sanchez-Rojas T.	Antibiotics (Basel)	10.3390/antibiotics13040304	2024
	Plant growth-promoting microbes improve stormwater retention of a newly-built vertical greenery system.	Xie L, Shu X, Kotze DJ, Kuoppamaki K, Timonen S, Lehvavirta S.	J Environ Manage	10.1016/j.jenvman.2022.116274	2022
	Bacterial diacetyl suppresses abiotic stress-induced senescence in Arabidopsis.	Singh SK, Sun Y, Yang Y, Zuo Z, Wu X, Shao C, Peng L, Pare PW, Zhang H.	J Integr Plant Biol	10.1111/jipb.13260	2022
	Effects of biological agents on rhizosphere microecological environment and nutrient availability for rice.	Zhou H, Yu K, Nie L, Liu L, Zhou J, Wu K, Ye H, Wu Z.	Front Microbiol	10.3389/fmicb.2024.1447527	2024
Phylogeny	Diversity Characteristics and Composition of Gut Microbiota in Antheraea pernyi (Lepidoptera: Saturniidae) Larvae Across Different Instars.	Hou P, Liu L, Ma X, Men Y, Yang D, Wang J, Zhang C.	Insects	10.3390/insects16090909	2025
	Targeting formyl peptide receptor 1 with anteiso-C13-surfactin for neutrophil-dominant acute respiratory distress syndrome.	Yang SC, Wang YH, Ho CM, Tsai YF, Sung PJ, Lin TE, Hwang TL.	Br J Pharmacol	10.1111/bph.16073	2023
Enzymology	Purification of fibrinolytic enzyme from Bacillus amyloliquefaciens GUTU06 and properties of the enzyme.	Wu J, Lan G, He N, He L, Li C, Wang X, Zeng X.	Food Chem X	10.1016/j.fochx.2023.100896	2023
	Increasing peptide yield of soybean meal solid-state fermentation of ultrasound-treated Bacillus amyloliquefaciens	Wang Y, Xu K, Lu F, Wang Y, Ouyang N, Ma H.	Innovative food science & emerging technologies : IFSET : the official scientific journal of the European Federation of Food Science and Technology.	10.1016/j.ifset.2021.102704	2021
	A pH-Dependent Gene Expression Enables Bacillus amyloliquefaciens MBNC to Adapt to Acid Stress.	Chowdhury N, Goswami G, Boro RC, Barooah M.	Curr Microbiol	10.1007/s00284-021-02573-y	2021
	Biocontrol Potential of Bacillus amyloliquefaciens LYZ69 Against Anthracnose of Alfalfa (Medicago sativa).	Hu J, Zheng M, Dang S, Shi M, Zhang J, Li Y.	Phytopathology	10.1094/phyto-09-20-0385-r	2021
	The Mechanism of Oxidative Stress in Cells Isolation, Identification, and Genome-Wide Sequence Analysis of Nitrite Amylolytic Bacillus.	Jiang J.	Stem Cells Int	10.1155/2022/9521900	2022
	Pine Rhizosphere Soil Microorganisms Enhance the Growth and Resistance of Pinus massoniana Against Nematode Infection.	Zhu J, Deng C, Zhang Y, Liu M, Zhou G, Liu J.	Microorganisms	10.3390/microorganisms13040790	2025
	Antifungal potential of Bacillus strains: implications for biocontrol strategies in food safety and sustainable agriculture.	Gharsallah H, Cheffi M, Mallek R, Omri N, Triki MA, Oztop MH, Zarai Z.	Front Microbiol	10.3389/fmicb.2025.1615252	2025
	Holistic Approaches to Plant Stress Alleviation: A Comprehensive Review of the Role of Organic Compounds and Beneficial Bacteria in Promoting Growth and Health.	Hathurusinghe SHK, Azizoglu U, Shin JH.	Plants (Basel)	10.3390/plants13050695	2024
	Antagonistic activity of Bacillus amyloliquefaciens subsp. amyloliquefaciens against multidrug resistant Serratia rubidaea.	Afrin S, Bhuiyan MNI.	Curr Res Microb Sci	10.1016/j.crmicr.2023.100206	2023
	Screening of intestinal probiotics and the effects of feeding probiotics on the digestive enzyme activity, immune, intestinal flora and WSSV resistance of Procambarus clarkii	Xu L, Yuan J, Chen X, Yu R, Xie M, Chen C, Wu Z.	Aquaculture	10.1016/j.aquaculture.2021.736748	2022
	Isolation and Identification of a Bacillus sp. from Freshwater Sediment Displaying Potent Activity Against Bacteria and Phytopathogen Fungi.	Camacho MI, Garcia JM, Roget D, Ferrer A, Wieme AD, Vandamme P, Rodriguez S, Llaurado G, Lescaylle Y, Pena L, Bonne J, Merino TL.	Curr Microbiol	10.1007/s00284-022-03090-2	2022
	The Probiotic Potential and Metabolite Characterization of Bioprotective Bacillus and Streptomyces for Applications in Animal Production.	Evangelista AG, Nazareth TM, Luz C, Dopazo V, Moreno A, Riolo M, Meca G, Luciano FB.	Animals (Basel)	10.3390/ani14030388	2024
	Bioaugmentation of Bacillus amyloliquefaciens-Bacillus kochii co-cultivation to improve sensory quality of flue-cured tobacco.	Wu X, Zhu P, Li D, Zheng T, Cai W, Li J, Zhang B, Zhu B, Zhang J, Du G.	Arch Microbiol	10.1007/s00203-021-02556-4	2021
	A study on the synergetic effect of Bacillus amyloliquefaciens and dipotassium phosphate on Alternaria solani causing early blight disease of tomato	Imran M, Abo-Elyousr KAM, Mousa MAA, Saad MM.	Eur J Plant Pathol	10.1007/s10658-021-02384-8	2022
Pathogenicity	Bacillus amyloliquefaciens SCGB1 Alleviates Dextran Sulfate Sodium-Induced Colitis in Mice Through Immune Regulation.	Kang M, Choi HJ, Yun B, Lee J, Yoo J, Yang HJ, Jeong DY, Kim Y, Oh S.	J Med Food	10.1089/jmf.2021.k.0044	2021
	A Novel Biocontrol Strain Bacillus amyloliquefaciens FS6 for Excellent Control of Gray Mold and Seedling Diseases of Ginseng.	Wang R, Wang C, Zuo B, Liang X, Zhang D, Liu R, Yang L, Lu B, Wang X, Gao J.	Plant Dis	10.1094/pdis-07-20-1593-re	2021
	Probiogenomic analysis and safety assessment of Bacillus isolates using Omics approach in combination with In-vitro	Khullar G, Det-udom R, Prombutar P, Prakitchaiwattana C.	Lebensm Wiss Technol	10.1016/j.lwt.2022.113216	2022
	Efficiency and mechanism of reducing ammonia volatilization in alkaline farmland soil using Bacillus amyloliquefaciens biofertilizer.	Xue L, Sun B, Yang Y, Jin B, Zhuang G, Bai Z, Zhuang X.	Environ Res	10.1016/j.envres.2021.111672	2021
	Functional annotation and complete genome analysis confirm the probiotic characteristics of Bacillus species isolated from the gut of Nile tilapia	Kuebutornye FKA, Lu Y, Wang Z, Mraz J.	Lebensm Wiss Technol	10.1016/j.lwt.2022.113541	2022
	Overexpression of uracil permease and nucleoside transporter from Bacillus amyloliquefaciens improves cytidine production in Escherichia coli	Ma R, Fang H, Liu H, Pan L, Wang H, Zhang H.	Biotechnol Lett		2021
Biotechnology	Whole genome analysis of Bacillus amyloliquefaciens TA-1, a promising biocontrol agent against Cercospora arachidicola pathogen of early leaf spot in Arachis hypogaea L.	Wang C, Ahsan T, Ding A, Han D, Zang CQ, Huang YQ, Hussain K.	BMC Plant Biol	10.1186/s12870-023-04423-4	2023
Transcriptome	Transcriptomic and metabolomic analysis reveals the influence of carbohydrates on lignin degradation mediated by Bacillus amyloliquefaciens.	Li X, Li Z, Li M, Li J, Wang Q, Wang S, Li S, Li H.	Front Microbiol	10.3389/fmicb.2024.1224855	2024
	Meta-analysis of biofertilizer effects of Bacillus species on tomato yield.	Ogugua UV, Ogbuewu IP, Mbajiorgu CA, Adriaanse P.	Sci Rep	10.1038/s41598-025-12711-2	2025
Biotechnology	Molecular Cloning of the Extracellular Lipases of Bacillus Amyloliquefaciens Isolated from Agrifood Wastes.	Khodakarami Fard Z, Shirazinejad A, Mohammadi M, Hashemi SMB.	Iran J Biotechnol	10.30498/ijb.2024.417315.3797	2024
	Antibacterial Activities of Bacillus amyloliquefaciens DQB-1 Isolated From the Cecum of Dezhou Donkeys.	Chen N, Liu Y, Qin P, Li Y, Ma D, Li J, Shi T, Zhu Z.	J Equine Vet Sci	10.1016/j.jevs.2021.103616	2021
Metabolism	Isolation and identification of an osmotolerant Bacillus amyloliquefaciens strain T4 for 2, 3-butanediol production with tobacco waste.	Han J, Wang F, Li Z, Liu L, Zhang G, Chen G, Liu J, Zhang H.	Prep Biochem Biotechnol	10.1080/10826068.2021.1925912	2022
	Bacillibactin class of siderophore antibiotics from a marine symbiotic Bacillus as promising antibacterial agents.	Chakraborty K, Kizhakkekalam VK, Joy M, Chakraborty RD.	Appl Microbiol Biotechnol	10.1007/s00253-021-11632-0	2022
	Bacillus amyloliquefaciens 11B91 inoculation enhances the growth of quinoa (Chenopodium quinoa Willd.) under salt stress.	Li J, Guo X, Cai D, Xu Y, Wang Y.	PeerJ	10.7717/peerj.15925	2023
	Growth of Bacillus amyloliquefaciens as influence by Si nutrition.	Matichenkov V, Bocharnikova E, Romanova A, Doullet P.	Arch Microbiol	10.1007/s00203-021-02421-4	2021
	Effects of mixed culture fermentation of Bacillus amyloliquefaciens and Trichoderma longibrachiatum on its constituent strains and the biocontrol of tomato Fusarium wilt.	Ma Q, Cong Y, Feng L, Liu C, Yang W, Xin Y, Chen K.	J Appl Microbiol	10.1111/jam.15208	2022
	Biosynthesis and evaluation of a novel highly water-soluble quercetin glycoside derivative.	Cao JN, Wang WH, Qu YJ, Xue GL, Wei ZY, Liu JQ, Han HY, Zhang S, Song P.	J Asian Nat Prod Res	10.1080/10286020.2021.1981875	2022
	Optimizing alpha-amylase from Bacillus amyloliquefaciens on bread waste for effective industrial wastewater treatment and textile desizing through response surface methodology.	Abd-Elhalim BT, Gamal RF, El-Sayed SM, Abu-Hussien SH.	Sci Rep	10.1038/s41598-023-46384-6	2023
	Identification of a New Pathogenic fungi Causing Sorghum Leaf Spot Disease and Its Management Using Natural Product and Microorganisms.	Wei G, Zhao W, Hu A, Ren M, Huang Y, Xu H.	Microorganisms	10.3390/microorganisms11061431	2023
Metabolism	Bio-augmented effect of Bacillus amyloliquefaciens and Candida versatilis on microbial community and flavor metabolites during Chinese horse bean-chili-paste fermentation.	Lu Y, Yang L, Yang G, Chi Y, He Q.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2021.109262	2021
	Difficidin class of polyketide antibiotics from marine macroalga-associated Bacillus as promising antibacterial agents.	Chakraborty K, Kizhakkekalam VK, Joy M, Dhara S.	Appl Microbiol Biotechnol	10.1007/s00253-021-11390-z	2021
	Chiral analysis of glycerol phosphates - can bacteria biosynthesize heterochiral phospholipid membranes?	Palyzova A, Guschina IA, Rezanka T.	J Chromatogr A	10.1016/j.chroma.2022.463267	2022
	Enzymatic Assembly of Chitosan-Based Network Polysaccharides and Their Encapsulation and Release of Fluorescent Dye.	Totani M, Nakamichi A, Kadokawa JI.	Molecules	10.3390/molecules29081804	2024
	Metagenomic analysis of the intestinal microbiome reveals the potential mechanism involved in Bacillus amyloliquefaciens in treating schistosomiasis japonica in mice.	Chen H, Huang S, Zhao Y, Sun R, Wang J, Yao S, Huang J, Yu Z.	Microbiol Spectr	10.1128/spectrum.03735-23	2024
	Fish Health Enhancement and Intestinal Microbiota Benefits of Asian Seabass (Lates calcarifer Bloch, 1790) on Dietary Sea Lettuce (Ulva rigida C. Agardh, 1823) Extract Supplementation.	Klongklaew N, Tansutaphanit S, Tiewpair P, Buncharoen W, Phaksopa J, Srisapoome P, Uchuwittayakul A.	Animals (Basel)	10.3390/ani15121714	2025
	Efficacy of a feed additive consisting of Bacillus velezensisNITE BP-01844 (BA-KING®) for chickens for fattening, chickens reared for laying, turkeys for fattening, turkeys reared for breeding and all avian species for fattening, or rearing to slaughter or point of lay including non-food producing species (Toa Biopharma Co., Ltd.).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Durjava M, Dusemund B, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Sanz Y, Villa RE, Woutersen R, Anguita M, Ortuno J, Revez J, Navarro-Villa A.	EFSA J	10.2903/j.efsa.2023.8053	2023
	Phylogenetic Illustration of Eisenia fetida Associated Vermi-bacteria Involved in Heavy Metals Remediation and Retaining Plant Growth Promoting Traits.	Naseer A, Andleeb S, Basit A, Abbasi WA, Ejaz S, Ali S, Ali NM.	J Oleo Sci	10.5650/jos.ess21366	2022
	The influence of probiotics of different microbiological composition on histology of the gastrointestinal tract of juvenile Oncorhynchus mykiss.	Nikiforov-Nikishin A, Nikiforov-Nikishin D, Kochetkov N, Smorodinskaya S, Klimov V.	Microsc Res Tech	10.1002/jemt.23927	2022
	Nigrospora oryzae Causing Leaf Spot Disease on Chrysanthemum × morifolium Ramat and Screening of Its Potential Antagonistic Bacteria.	Sha H, Liu X, Xiao X, Zhang H, Gu X, Chen W, Mao B.	Microorganisms	10.3390/microorganisms11092224	2023
	Antiadhesive, antibiofilm and dispersion activity of biosurfactants isolated from Bacillus amyloliquefaciens 3/22.	Englerova K, Nemcova R, Bedlovicova Z, Stykova E.	Ceska Slov Farm	10.5817/csf2021-5-172	2021
	Microalgae and microbial inoculant as partial substitutes for chemical fertilizer enhance Polygala tenuifolia yield and quality by improving soil microorganisms.	Su Y, Ren Y, Wang G, Li J, Zhang H, Yang Y, Pang X, Han J.	Front Plant Sci	10.3389/fpls.2024.1499966	2024
	Enhanced extracellular beta-mannanase production by overexpressing PrsA lipoprotein in Bacillus subtilis and optimizing culture conditions.	Xu L, Zhang Y, Dong Y, Qin G, Zhao X, Shen Y.	J Basic Microbiol	10.1002/jobm.202200080	2022
	Inoculation with Bacillus amyloliquefaciens and mycorrhiza confers tolerance to drought stress and improve seed yield and quality of soybean plant	Sheteiwy MS, Abd Elgawad H, Xiong Y, Macovei A, Brestic M, Skalicky M, Shaghaleh H, Alhaj Hamoud Y, El-Sawah AM.	Physiologia Plantarum.		2021
	Improving the nutritional value and bioactivity of soybean meal in solid-state fermentation using Bacillus strains newly isolated from the gut of the termite Termes propinquus.	Nualkul M, Yuangsoi B, Hongoh Y, Yamada A, Deevong P.	FEMS Microbiol Lett	10.1093/femsle/fnac044	2022
Metabolism	Bacillus amyloliquefaciens exopolysaccharide preparation induces glucagon-like peptide 1 secretion through the activation of bitter taste receptors.	Sung WW, Tu JH, Yu JS, Ulfa MZ, Chang JH, Cheng HL.	Int J Biol Macromol	10.1016/j.ijbiomac.2021.06.187	2021
Phylogeny	Molecular assessment of microbial diversity on eggshell of chukar partridges (Alectoris chukar) under semi-captive conditions.	Khan FM, Abbas FI, Ali N, Jamal A.	Nucleosides Nucleotides Nucleic Acids	10.1080/15257770.2022.2053712	2022
	Molecular characterization of Algerian Erwinia amylovora strains by VNTR analysis and biocontrol efficacy of Bacillus spp. and Pseudomonas brassicacearum antagonists	Tafifet L, Raio A, Holeva MC, Dikhai R, Kouskoussa CO, Cesbron S, Krimi Z.	Eur J Plant Pathol	10.1007/s10658-020-01938-6	2022
	Control of Phoma Leaf Spot and Root Decay of Table Beet in New York.	Pethybridge SJ, Murphy S, Hay F, Branch E, Sharma P, Kikkert JR.	Plant Dis	10.1094/pdis-11-21-2506-re	2022
	Effects of microencapsulated probiotics-supplemented diet on growth, non-specific immunity, intestinal health and resistance of juvenile Nile tilapia challenged with Aeromonas hydrophila	de Moraes AV, Owatari MS, da Silva E, de Oliveira Pereira M, Piola M, Ramos C, Farias DR, Schleder DD, Jesus GFA, Jatoba A.	Anim Feed Sci Technol	10.1016/j.anifeedsci.2022.115286	2022
	Biopolymer-Levan Characterization in Bacillus Species Isolated from Traditionally Fermented Soybeans (Thua Nao).	Wannasutta R, Laopeng S, Yuensuk S, McCloskey S, Riddech N, Mongkolthanaruk W.	ACS Omega	10.1021/acsomega.4c09641	2025
	Identifying Key Pathogens and Effective Control Agents for Astragalus membranaceus var. mongholicus Root Rot.	Zhang B, Xia B, Wang C, Xiao O, Wang T, Zhao H, Dai X, Chen J, Wang Y, Kong Z.	J Fungi (Basel)	10.3390/jof11070544	2025
	Safety evaluation of the food enzyme bacillolysin from the non-genetically modified Bacillus amyloliquefaciens strain AGS 430.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Herman L, Aguilera J, Andryszkiewicz M, Fernandez-Fraguas C, Liu Y, di Piazza G, Chesson A.	EFSA J	10.2903/j.efsa.2023.8392	2023
	The Association between Broiler Litter Microbiota and the Supplementation of Bacillus Probiotics in a Leaky Gut Model	Horyanto D, Bajagai Y, von Hellens J, Chen X, Van T, Dunlop M, Stanley D.	Animals (Basel)		2024
	Evaluation of the Effect of Probiotic Supplementation on Intestinal Barrier Integrity and Epithelial Damage in Colitis Disease: A Systematic Review.	Sivri D, Seref B, Sare Bulut M, Gezmen Karadag M.	Nutr Rev	10.1093/nutrit/nuae180	2025
	Deciphering the Probiotic Potential of Bacillus amyloliquefaciens COFCAU_P1 Isolated from the Intestine of Labeo rohita Through In Vitro and Genetic Assessment.	Khan MIR, Kamilya D, Choudhury TG, Tripathy PS, Rathore G.	Probiotics Antimicrob Proteins	10.1007/s12602-021-09788-2	2021
	The effects of yeast fermentation on taste substance evolution and sensory development of dry-cured ham: The insights of peptidomics and metabolomics.	Wang X, Ding Y, Xia Q, Wang Y, Sun Y, Pan D, Cao J, Zhou C.	Food Chem X	10.1016/j.fochx.2025.103073	2025
	CodY, ComA, DegU and Spo0A controlling lipopeptides biosynthesis in Bacillus amyloliquefaciens fmbJ.	Sun J, Liu Y, Lin F, Lu Z, Lu Y.	J Appl Microbiol	10.1111/jam.15007	2021
	Molecular Mechanisms of the Biological Control of Pine Wilt Disease Using Microorganisms.	Su X, Luo Y, Hu J, Xia Y, Liu M, Li Y, Wang H.	Microorganisms	10.3390/microorganisms13061215	2025
	Differential expression of bio-active metabolites produced by chitosan polymers-based Bacillus amyloliquefaciens fermentation.	Kang BR, Song YS, Jung WJ.	Carbohydr Polym	10.1016/j.carbpol.2021.117799	2021
Phenotype	Bacillus amyloliquefaciens ameliorates high-carbohydrate diet-induced metabolic phenotypes by restoration of intestinal acetate-producing bacteria in Nile Tilapia.	Xu R, Li M, Wang T, Zhao YW, Shan CJ, Qiao F, Chen LQ, Zhang WB, Du ZY, Zhang ML.	Br J Nutr	10.1017/s0007114521001318	2022
	The mutated Bacillus amyloliquefaciens strain shows high resistance to Aeromonas hydrophila and Aeromonas veronii in grass carp.	Zhou P, Huang H, Lu J, Zhu Z, Xie J, Xia L, Luo S, Zhou K, Chen W, Ding X.	Microbiol Res	10.1016/j.micres.2021.126801	2021
Metabolism	Overexpression of uracil permease and nucleoside transporter from Bacillus amyloliquefaciens improves cytidine production in Escherichia coli.	Ma R, Fang H, Liu H, Pan L, Wang H, Zhang H.	Biotechnol Lett	10.1007/s10529-021-03103-3	2021
	Isolation and Characterizations of Histamine- and Tyramine-Producing Strains Isolated from Fermented Soybean Food: Soy Sauce and Soybean Paste.	Zhang X, Li S, Liu H, Wongta A, Xu Z, Zhou K, Hongsibsong S.	Foods	10.3390/foods14142407	2025
	Safety evaluation of the food enzyme bacillolysin from the non-genetically modified Bacillus amyloliquefaciens strain GNP.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Herman L, Aguilera J, Andryszkiewicz M, Fernandez-Fraguas C, Liu Y, di Piazza G, Chesson A.	EFSA J	10.2903/j.efsa.2023.8391	2023
	Identification of Bacillus strains producing glycosidases active on rutin and grape glycosidic aroma precursors	Haure M, Chi Nguyen TK, Cendres A, Perino S, Wache Y, Licandro H.	Lebensm Wiss Technol		2022
	Identification and Growth Characteristics of a Gluten-Degrading Bacterium from Wheat Grains for Gluten-Degrading Enzyme Production.	Lee GY, Jung MJ, Kim BM, Jun JY.	Microorganisms	10.3390/microorganisms11122884	2023
	Bioprospecting of Goat Rumen Microbiota for Optimum Cellulase Enzyme Production to Support Sustainable Bioenergy Systems.	Rabapane KJ, Matambo TS.	Microorganisms	10.3390/microorganisms13092170	2025
	The power of light: Impact on the performance of biocontrol agents under minimal nutrient conditions.	Karlsson ME, Hellstrom M, Flohr A, Bergstrand KJ, Alsanius BW.	Front Microbiol	10.3389/fmicb.2023.1087639	2023
	Biocontrol and Nanotechnology Strategies for Postharvest Disease Management in Fruits and Vegetables: A Comprehensive Review	Lawal H, Gaddafi M, Jamiu A, Edo G, Fremah O, El-yakub A, Mahunu G, Wang K, Zhang H, Yang Q.	Foods		2025
	Making the best of research investment in pathogens control through biocontrol. How is research correlated with agricultural microbial biological control product availability?	Helepciuc FE, Todor A.	PLoS Pathog	10.1371/journal.ppat.1011071	2023
	Biocontrol potential and action mechanism of Bacillus amyloliquefaciens DB2 on Bipolaris sorokiniana.	Luan P, Yi Y, Huang Y, Cui L, Hou Z, Zhu L, Ren X, Jia S, Liu Y.	Front Microbiol	10.3389/fmicb.2023.1149363	2023
	Current status and future trends of eco-friendly management of postharvest fungal decays in tomato fruit.	Wang Z, Wu M, Liao Q, Wang Y, Sui Y, Gong C.	NPJ Sci Food	10.1038/s41538-025-00477-w	2025
	Modular metabolic engineering of Bacillus amyloliquefaciens for high-level production of green biosurfactant iturin A.	She M, Zhou H, Dong W, Xu Y, Gao L, Gao J, Yang Y, Yang Z, Cai D, Chen S.	Appl Microbiol Biotechnol	10.1007/s00253-024-13083-9	2024
	Production of a novel lycopene-rich soybean food by fermentation with Bacillus amyloliquefaciens	Zou D, Ye C, Min Y, Li L, Ruan L, Yang Z, Wei X.	Lebensm Wiss Technol		2021
	Microbes in Agriculture: Prospects and Constraints to Their Wider Adoption and Utilization in Nutrient-Poor Environments.	Mohammed M, Dakora FD.	Microorganisms	10.3390/microorganisms12112225	2024
Metabolism	Effects of Dietary Gracilaria lichenoides and Bacillus amyloliquefaciens on Growth Performance, Antioxidant Capacity, and Intestinal Health of Penaeus monodon.	Tian J, Wang Y, Huang J, Yan H, Duan Y, Wang J, Zhou C, Huang Z.	Biology (Basel)	10.3390/biology13040252	2024
	Safety evaluation of the food enzyme alpha-amylase from the non-genetically modified Bacillus amyloliquefaciens strain NZYM-WR.	EFSA Panel on Food Contact Materials, Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Roos Y, Andryszkiewicz M, Apergi K, Fernandez-Fraguas C, Peluso S, di Piazza G, Liu Y, Chesson A.	EFSA J	10.2903/j.efsa.2023.8394	2023
	Draft Genome Sequence and Annotation of the Synthetic Textile Dye-Decolorizing Strain Bacillus amyloliquefaciens AD20, Isolated from a Dye Waste Pond.	Nsa IY, Odunsi AA, Amund OO.	Microbiol Resour Announc	10.1128/mra.00645-21	2021
	Transient Expression Vector Construction, Subcellular Localisation, and Evaluation of Antiviral Potential of Flagellin BP8-2.	Chen Y, Zhong J, Lu M, Yang C.	Molecules	10.3390/molecules29163876	2024
Pathogenicity	Bacillus amyloliquefaciens B10 can alleviate liver apoptosis and oxidative stress induced by aflatoxin B1.	Li X, Lv Z, Chen J, Nepovimova E, Long M, Wu W, Kuca K.	Food Chem Toxicol	10.1016/j.fct.2021.112124	2021
Metabolism	Application of ultrasound technology in the field of solid-state fermentation: increasing peptide yield through ultrasound-treated bacterial strain.	Wang Y, Xu K, Lu F, Wang Y, Ouyang N, Ma H.	J Sci Food Agric	10.1002/jsfa.11183	2021
	Bacteriocinogenic Potential of Bacillus amyloliquefaciens Isolated from Kimchi, a Traditional Korean Fermented Cabbage.	Jung S, Woo C, Fugaban JII, Vazquez Bucheli JE, Holzapfel WH, Todorov SD.	Probiotics Antimicrob Proteins	10.1007/s12602-021-09772-w	2021
	Solubilization of rock phosphate by phosphate solubilizing bacteria isolated from effluent treatment plant sludge of a fertilizer plant.	Maharana R, Dhal NK.	Folia Microbiol (Praha)	10.1007/s12223-022-00953-w	2022
Genetics	Antagonism of Bacillus velezensis ZGE166 Against the Pathogenic Fungi Causing Corm Rot Disease in Saffron (Crocus sativus L.).	Guo Y, Tian L, Zhu X, Liu S, Wang L, Li W.	Microb Ecol	10.1007/s00248-025-02539-8	2025
	Efficacy of authentic bio-nematicides against the root-knot nematode, Meloidogyne javanica infecting tomato under greenhouse conditions	Krif G, Lahlali R, El Aissami A, Laasli SE, Mimouni A, Serderidis S, Picaud T, Moens A, Dababat AA, Fahad K, Mokrini F.	Physiol Mol Plant Pathol	10.1016/j.pmpp.2022.101803	2022
Genetics	Multi-omics investigation of high-transglutaminase production mechanisms in Streptomyces mobaraensis and co-culture-enhanced fermentation strategies.	Chang H, Zheng Z, Li H, Xu Y, Zhen G, Zhang Y, Ren X, Liu X, Zhu D.	Front Microbiol	10.3389/fmicb.2025.1525673	2025
	Rhizosphere bacteria induce programmed cell death defence genes and signalling in chilli pepper.	Syed-Ab-Rahman SF, Arkhipov A, Wass TJ, Xiao Y, Carvalhais LC, Schenk PM.	J Appl Microbiol	10.1111/jam.15456	2022
Proteome	Effect of NaCl stress on exoproteome profiles of Bacillus amyloliquefaciens EB2003A and Lactobacillus helveticus EL2006H.	Naamala J, Subramanian S, Msimbira LA, Smith DL.	Front Microbiol	10.3389/fmicb.2023.1206152	2023
	A Novel Neotropical Bacillus siamensis Strain Inhibits Soil-Borne Plant Pathogens and Promotes Soybean Growth.	Moreira RF, Pires EBE, Sousa OF, Alves GB, Viteri Jumbo LO, Santos GR, Maia LJ, Ribeiro BM, Smagghe G, Perino EHB, Hausmann R, Oliveira EE, Aguiar RWS.	Microorganisms	10.3390/microorganisms13061366	2025
Biotechnology	Bacillus amyloliquefaciens strain QST713 may contribute to the management of SDHI resistance in Botrytis cinerea.	Samaras A, Hadjipetrou C, Karaoglanidis G.	Pest Manag Sci	10.1002/ps.6145	2021
	Optimizing the Fermentation Conditions of Cudrania tricuspidata Fruit Using Bacillus amyloliquefaciens for Anti-Inflammatory Activity and GC-MS-Based Volatile Component Characteristics.	Ha SY, Jung JY, Kim HC, Yang JK.	Evid Based Complement Alternat Med	10.1155/2023/5042416	2023
	Endophytic bacteria promote biomass production and mercury-bioaccumulation of Bermuda grass and Indian goosegrass.	Ustiatik R, Nuraini Y, Suharjono S, Jeyakumar P, Anderson CWN, Handayanto E.	Int J Phytoremediation	10.1080/15226514.2021.2023461	2022
	Potential synbiotic effects of a Bacillus mixture and chitosan on growth, immune responses and VP_(AHPND) resistance in Pacific white shrimp (Litopenaeus vannamei, Boone, 1931).	Kewcharoen W, Srisapoome P.	Fish Shellfish Immunol	10.1016/j.fsi.2022.07.017	2022
	Antiviral activity by lecithin-induced fengycin lipopeptides as a potent key substrate against Cucumber mosaic virus.	Kang BR, Park JS, Jung WJ.	Microb Pathog	10.1016/j.micpath.2021.104910	2021
	Antagonistic effect in vitro of three commercial strains of Bacillus sp. against the forest pathogen Diplodia corticola	Munoz-Adalia EJ, Meijer A, Campillo-Brocal JC, Colinas C.	For Pathol		2021
Metabolism	Prebiotic, Probiotic, Antimicrobial, and Functional Food Applications of Bacillus amyloliquefaciens.	WoldemariamYohannes K, Wan Z, Yu Q, Li H, Wei X, Liu Y, Wang J, Sun B.	J Agric Food Chem	10.1021/acs.jafc.0c06396	2020
Genetics	Genome sequence data of Bacillus amyloliquefaciens L-17.	Zaidi-Ait Salem M, Girbal-Neuhauser E, Nait Chabane Y.	Data Brief	10.1016/j.dib.2021.107505	2021
	Testing Effects of Seed Treatments against Clubroot Disease in Various Oilseed Rape Hybrids.	Klueken AM, Mahfoud Y, Rossler S, Ludwig-Muller J.	Pathogens	10.3390/pathogens12111339	2023
	Bacillus amyloliquefaciens Probiotics Mix Supplementation in a Broiler Leaky Gut Model.	Horyanto D, Bajagai YS, Kayal A, von Hellens J, Chen X, Van TTH, Radovanovic A, Stanley D.	Microorganisms	10.3390/microorganisms12020419	2024
	A Strong Antifungal Activity of 7-O-Succinyl Macrolactin A vs Macrolactin A from Bacillus amyloliquefaciens ELI149.	Salazar F, Ortiz A, Sansinenea E.	Curr Microbiol	10.1007/s00284-020-02200-2	2020
Genetics	Genomic and biological control of Sclerotinia sclerotiorum using an extracellular extract from Bacillus velezensis 20507.	Cheng Y, Lou H, He H, He X, Wang Z, Gao X, Liu J.	Front Microbiol	10.3389/fmicb.2024.1385067	2024
	Improvement of antifungal activity of a culture filtrate of endophytic Bacillus amyloliquefaciens isolated from kiwifruit and its effect on postharvest quality of kiwifruit	Pang L, Xia B, Liu X, Yi Y, Jiang L, Chen C, Li P, Zhang M, Deng X, Wang R.	J Food Biochem		2021
	Rational engineering of BaLal_16 from a novel Bacillus amyloliquefaciens strain to improve catalytic performance.	Liu XH, Ning LX, Zhang YF, Wang YF, Lu ZH, Wang T.	Enzyme Microb Technol	10.1016/j.enzmictec.2021.109781	2021
Enzymology	In Vitro Approbation of Microbial Preparations to Shield Fruit Crops from Fire Blight: Physio-Biochemical Parameters.	Nurzhanova AA, Mamirova A, Mursaliyeva V, Nurmagambetova AS, Zhumasheva Z, Turdiyev T, Kushnarenko S, Ismailova E.	Plants (Basel)	10.3390/plants13111431	2024
	Dietary supplementation of compound probiotics to improve performance, egg quality, biochemical parameters and intestinal morphology of laying hens.	Wang Y, Zhang C, Chen X, Zheng A, Liu G, Ren Y, Chen Z.	Front Vet Sci	10.3389/fvets.2024.1505151	2024
	Differential effect of polyol and sugar osmolytes on the refolding of homologous alpha amylases: A comparative study.	Ahmad A, Mishra R.	Biophys Chem	10.1016/j.bpc.2021.106733	2022
Metabolism	Rational design of signal peptides for improved MtC1LPMO production in Bacillus amyloliquefaciens.	Guo X, Chai C, An Y, Peng C, Shi N, Wang W, Lu F, Dai Y, Liu F.	Int J Biol Macromol	10.1016/j.ijbiomac.2021.02.034	2021
	A biological product of Bacillus amyloliquefaciens QST713 strain for promoting banana plant growth and modifying rhizosphere soil microbial diversity and community composition.	Tian L, Zhang W, Zhou GD, Li S, Wang Y, Yang B, Bai T, Fan H, He P, Zheng SJ.	Front Microbiol	10.3389/fmicb.2023.1216018	2023
	New non-ureolytic heterotrophic microbial induced carbonate precipitation for suppression of sand dune wind erosion.	Hemayati M, Nikooee E, Habibagahi G, Niazi A, Afzali SF.	Sci Rep	10.1038/s41598-023-33070-w	2023
Transcriptome	Biosynthesis of a Novel Bioactive Metabolite of Spermidine from Bacillus amyloliquefaciens: Gene Mining, Sequence Analysis, and Combined Expression.	Zou D, Li L, Min Y, Ji A, Liu Y, Wei X, Wang J, Wen Z.	J Agric Food Chem	10.1021/acs.jafc.0c07143	2021
	Antimicrobial Activity of Bacillus subtilis KATMIRA1933 and Bacillus amyloliquefaciens B-1895 Against Staphylococcus aureus Biofilms Isolated from Wound Infection.	Algburi A, Al-Hasani HM, Ismael TK, Abdelhameed A, Weeks R, Ermakov AM, Chikindas ML.	Probiotics Antimicrob Proteins	10.1007/s12602-020-09673-4	2021
Pathogenicity	Bacillus amyloliquefaciens TL106 protects mice against enterohaemorrhagic Escherichia coli O157:H7-induced intestinal disease through improving immune response, intestinal barrier function and gut microbiota.	Bao CL, Liu SZ, Shang ZD, Liu YJ, Wang J, Zhang WX, Dong B, Cao YH.	J Appl Microbiol	10.1111/jam.14952	2021
	Effects of two fish-derived probiotics on growth performance, innate immune response, intestinal health, and disease resistance of Procambarus clarkii	Zhu L, Kong Y, Chang X, Feng J, Wang X, Hou L, Zhao X, Pei C, Kong X.	Aquaculture		2022
Metabolism	New Class of Chitosanase from Bacillus amyloliquefaciens for the Generation of Chitooligosaccharides.	Bhuvanachandra B, Sivaramakrishna D, Alim S, Preethiba G, Rambabu S, Swamy MJ, Podile AR.	J Agric Food Chem	10.1021/acs.jafc.0c05078	2021
	[Bacillus amyloliquefaciens Biofertilizer Mitigating Soil Ammonia Volatilization].	Yang YH, Xue LX, Sun B, Zhang B, Zhuang XL, Zhuang GQ, Bai ZH.	Huan Jing Ke Xue	10.13227/j.hjkx.201910157	2020
	Efficacy of Biological Control Agents and Resistance Inducer for Control of Mal Secco Disease.	Leonardi GR, Polizzi G, Vitale A, Aiello D.	Plants (Basel)	10.3390/plants12091735	2023
	Bacillus amyloliquefaciens AK-12 Helps Rapeseed Establish a Protection against Brevicoryne brassicae.	Qian S, Ahmed A, He P, He P, Munir S, Xia M, Tang C, Tang P, Wang Z, Khan R, Li X, Wu Y, He Y.	Int J Mol Sci	10.3390/ijms242115893	2023
Genetics	Genomic and metabolomic insights into the biocontrol potential of Bacillus velezensis ZHR0 against sugarcane smut.	Pan K, Chen J, Li H, Xu S, Wang J, Yan X, Zhao Y, Jiang H, Khan A, Tahir Khan M, Powell CA, Wen R, Zhang M.	Front Microbiol	10.3389/fmicb.2025.1582763	2025
	Characterization and survival of broad-spectrum biocontrol agents against phytopathogenic fungi.	Azeem S, Agha SI, Jamil N, Tabassum B, Ahmed S, Raheem A, Jahan N, Ali N, Khan A.	Rev Argent Microbiol	10.1016/j.ram.2021.10.005	2022
Metabolism	A newly isolated Bacillus amyloliquefaciens SRB04 for the synthesis of selenium nanoparticles with potential antibacterial properties.	Ashengroph M, Hosseini SR.	Int Microbiol	10.1007/s10123-020-00147-9	2021
Metabolism	Reducing the cell lysis to enhance yield of acid-stable alpha amylase by deletion of multiple peptidoglycan hydrolase-related genes in Bacillus amyloliquefaciens.	Zhang J, Xu X, Li X, Chen X, Zhou C, Liu Y, Li Y, Lu F.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.11.193	2021
	Inoculation of wheat seeds with spore-forming bacteria as a novel approach to enhance growth under climate change-induced stress conditions.	Aryan S, Habibi S, Agake SI, Aoudi Y, Seerat AY, An H, Yasuda M, Stacey G, Yokoyama T, Ohkama-Ohtsu N.	Sci Rep	10.1038/s41598-025-20269-2	2025
Enzymology	Production of Taste Enhancers from Protein Hydrolysates of Porcine Hemoglobin and Meat Using Bacillus amyloliquefaciens gamma-Glutamyltranspeptidase.	Li Q, Liu J, De Gobba C, Zhang L, Bredie WLP, Lametsch R.	J Agric Food Chem	10.1021/acs.jafc.0c04513	2020
	Improvement of antifungal activity of a culture filtrate of endophytic Bacillus amyloliquefaciens isolated from kiwifruit and its effect on postharvest quality of kiwifruit.	Pang L, Xia B, Liu X, Yi Y, Jiang L, Chen C, Li P, Zhang M, Deng X, Wang R.	J Food Biochem	10.1111/jfbc.13551	2021
Enzymology	Recombinant Expression and Bioprocess Optimization of Priestia megaterium alpha-Amylase and Its Impact on Dough Fermentation Efficiency.	Erdem A, Akbulut K, Turker M, Binay B.	Chem Biodivers	10.1002/cbdv.202500866	2025
Enzymology	Preparation and synthetic dye decolorization ability of magnetic cross-linked enzyme aggregates of laccase from Bacillus amyloliquefaciens.	Wang H, Han S, Wang J, Yu S, Li X, Lu L.	Bioprocess Biosyst Eng	10.1007/s00449-020-02481-8	2021
	Impact of Supplements on Enhanced Activity of Bacillus amyloliquefaciens BmB1 Against Pythium aphanidermatum Through Lipopeptide Modulation.	Ravi A, Rajan S, Khalid NK, Jose MS, Aravindakumar CT, Krishnankutty RE.	Probiotics Antimicrob Proteins	10.1007/s12602-020-09707-x	2021
Pathogenicity	Biological and Chemical Management of Aspergillus carbonarius and Ochratoxin A in Vineyards.	Iliadi MK, Varveri M, Tsitsigiannis DI.	Toxins (Basel)	10.3390/toxins16120527	2024
	Characterization of Bacillus amyloliquefaciens BA-4 and its biocontrol potential against Fusarium-related apple replant disease.	Li B, He X, Guo S, Li D, Wang Y, Meng X, Dai P, Hu T, Cao K, Wang S.	Front Plant Sci	10.3389/fpls.2024.1370440	2024
	Isolation and identification of antagonistic Bacillus amyloliquefaciens HSE-12 and its effects on peanut growth and rhizosphere microbial community.	Li H, Li C, Song X, Li J, Zhang P, Sun F, Geng Z, Liu X.	Front Microbiol	10.3389/fmicb.2023.1274346	2023
Metabolism	Inoculation with Bacillus amyloliquefaciens and mycorrhiza confers tolerance to drought stress and improve seed yield and quality of soybean plant.	Sheteiwy MS, Abd Elgawad H, Xiong YC, Macovei A, Brestic M, Skalicky M, Shaghaleh H, Alhaj Hamoud Y, El-Sawah AM.	Physiol Plant	10.1111/ppl.13454	2021
	Comparative Analysis of Signature Sequences from Adenylation Domains Situated within Bacterial-Origin Nonribosomal Peptide Synthetase Modules.	Gao W, Zhang Z, Yu H, Li X, Quan C, Xue Y, Zhao P.	J Microbiol Biotechnol	10.4014/jmb.2503.02030	2025
	Assessment of the safety and anti-inflammatory effects of three Bacillus strains in the respiratory tract.	Kim HS, Arellano K, Park H, Todorov SD, Kim B, Kang H, Park YJ, Suh DH, Jung ES, Ji Y, Holzapfel WH.	Environ Microbiol	10.1111/1462-2920.15530	2021
	Ameliorative effect of poly-gamma-glutamic acid biopreparation on coastal saline soil.	Liu P, Chen L, Hamoud YA, Zheng J, Chang T, Ali J, Huang H, Shaghaleh H.	Heliyon	10.1016/j.heliyon.2024.e36762	2024
	Development of a Strain-Specific Quantification Method for Monitoring Bacillus amyloliquefaciens TF28 in the Rhizospheric Soil of Soybean.	Zhang S, Ma Y, Jiang W, Meng L, Cao X, Hu J, Chen J, Li J.	Mol Biotechnol	10.1007/s12033-020-00268-6	2020
	Identification and utilization of a new Bacillus amyloliquefaciens XY-1 against Fusarium head blight.	Xu X, Cheng Y, Fang Z, Yin J, Shen H, Ma D.	Front Plant Sci	10.3389/fpls.2022.1055213	2022
	Presence of viable gram-positive bacteria in blood of patients with inflammatory bowel disease is not affected by treatment.	Davidson S, So Y, Oscarsson E, Hakansson A, Sjoberg K.	Sci Rep	10.1038/s41598-025-07535-z	2025
	Isolation, characterization and identification of novel broad spectrum bacterial antagonist(s) to control Fusarium wilt of eggplant	Chakraborty N, Chakraborty N, Acharyya P, Acharya K.	Physiol Mol Plant Pathol		2021
	Bibliometric analysis of the S24-7 family and its association with health.	Gao F, Wang F, Wang D, Du G, Gao F.	Front Microbiol	10.3389/fmicb.2025.1571883	2025
	Biocontrol rhizobacteria enhances growth and yield of wheat (Triticum aestivum) under field conditions against Fusarium oxysporum.	Agha SI, Ullah M, Khan A, Jahan N, Ullah SM, Tabassum B, Parveen S, Rehmat Z, Hussain A, Ahmed S, Hamid Hamdard M.	Bioengineered	10.1080/21655979.2023.2260923	2023
	Adsorption Studies of Salmonella Enteritidis and Escherichia coli on Chitosan-Coated Magnetic Nanoparticles.	Franco AJ, Alocilja E.	Cells	10.3390/cells14030225	2025
	Characterization and Identification of Potential Antioxidant, Antidiabetic, and Antihypertensive Peptides From Hydrolysates of Tenebrio molitor Flour and Its Protein Concentrate.	de Matos FM, de Castro RJS.	J Food Sci	10.1111/1750-3841.70595	2025
Metabolism	Identification of a Bacillus amyloliquefaciens H6 Thioesterase Involved in Zearalenone Detoxification by Transcriptomic Analysis.	Xu L, Sun X, Wan X, Li H, Yan F, Han R, Li H, Li Z, Tian Y, Liu X, Kang X, Wang Y.	J Agric Food Chem	10.1021/acs.jafc.0c03954	2020
	Visualization of probiotics via epifluorescence microscopy and fluorescence in situ hybridization (FISH).	Pasulka AL, Howes AL, Kallet JG, VanderKelen J, Villars C.	J Microbiol Methods	10.1016/j.mimet.2021.106151	2021
	A Probiotic Bacillus amyloliquefaciens D-1 Strain Is Responsible for Zearalenone Detoxifying in Coix Semen.	Deng T, Chen Y, Zhang J, Gao Y, Yang C, Jiang W, Ou X, Wang Y, Guo L, Zhou T, Yuan QS.	Toxins (Basel)	10.3390/toxins15120674	2023
	Production and Characterisation of an Exopolysaccharide by Bacillus amyloliquefaciens: Biotechnological Applications.	Sanchez-Leon E, Huang-Lin E, Amils R, Abrusci C.	Polymers (Basel)	10.3390/polym15061550	2023
	Research on safety and compliance of imported microbial inoculants using high-throughput sequencing.	Dong L, Zhang Z, Zhu B, Li S, He Y, Lou Y, Li P, Zheng H, Tian Z, Ma X.	Front Med (Lausanne)	10.3389/fmed.2022.963988	2022
	Bacterial and yeast microbial diversity of the ripened traditional middle east surk cheese	Esen Y, Cetin B.	Int Dairy J	10.1016/j.idairyj.2021.105004	2021
	Bacillus amyloliquefaciens Strain PMB05 Intensifies Plant Immune Responses to Confer Resistance Against Bacterial Wilt of Tomato.	Ho TH, Chuang CY, Zheng JL, Chen HH, Liang YS, Huang TP, Lin YH.	Phytopathology	10.1094/phyto-01-20-0026-r	2020
Metabolism	Physicochemical and sensory properties of terasi (an Indonesian fermented shrimp paste) produced using Lactobacillus plantarum and Bacillus amyloliquefaciens.	Prihanto AA, Nurdiani R, Jatmiko YD, Firdaus M, Kusuma TS.	Microbiol Res	10.1016/j.micres.2020.126619	2021
	Seed Priming with Rhizospheric Bacillus subtilis: A Smart Strategy for Reducing Fumonisin Contamination in Pre-Harvest Maize.	Jannat M, Auyon ST, Tushar ASM, Tonny SH, Hasan MH, Shahi M, Shahi M, Singha UR, Sultana A, Akter S, Islam MR.	Toxins (Basel)	10.3390/toxins16080337	2024
	Real-Time PCR (qtPCR) to Discover the Fate of Plant Growth-Promoting Rhizobacteria (PGPR) in Agricultural Soils.	Iosa I, Agrimonti C, Marmiroli N.	Microorganisms	10.3390/microorganisms12051002	2024
	Effects of glucose oxidase and its combination with B. amyloliquefaciens SC06 on intestinal microbiota, immune response and antioxidative capacity in broilers.	Wang Y, Wang B, Zhan X, Wang Y, Li W.	Animal	10.1016/j.animal.2022.100473	2022
Pathogenicity	Crude Lipopeptides Produced by Bacillus amyloliquefaciens Could Control the Growth of Alternaria alternata and Production of Alternaria Toxins in Processing Tomato.	Zhang Y, Fan Y, Dai Y, Jia Q, Guo Y, Wang P, Shen T, Wang Y, Liu F, Guo W, Wu A, Jiao Z, Wang C.	Toxins (Basel)	10.3390/toxins16020065	2024
	Physicochemical properties of plasma-activated water and associated antimicrobial activity against fungi and bacteria.	Rotondo PR, Aceto D, Ambrico M, Stellacci AM, Faretra F, De Miccolis Angelini RM, Ambrico PF.	Sci Rep	10.1038/s41598-025-88369-7	2025
	Prospective Application of Nanoencapsulated Bacillus amyloliquefaciens on Broiler Chickens' Performance and Gut Health with Efficacy against Campylobacter jejuni Colonization.	Ismail H, Ibrahim D, El Sayed S, Wahdan A, El-Tarabili RM, Rizk El-Ghareeb W, Abdullah Alhawas B, Alahmad BAY, Abdel-Raheem SM, El-Hamid MIA.	Animals (Basel)	10.3390/ani13050775	2023
Metabolism	Endophytic Bacillus amyloliquefaciens YTB1407 elicits resistance against two fungal pathogens in sweet potato (Ipomoea batatas (L.) Lam.).	Wang CJ, Wang YZ, Chu ZH, Wang PS, Liu BY, Li BY, Yu XL, Luan BH.	J Plant Physiol	10.1016/j.jplph.2020.153260	2020
	Metabolic engineering of Bacillus amyloliquefaciens for efficient production of alpha-glucosidase inhibitor1-deoxynojirimycin.	Li X, Zhang M, Lu Y, Wu N, Chen J, Ji Z, Zhan Y, Ma X, Chen J, Cai D, Chen S.	Synth Syst Biotechnol	10.1016/j.synbio.2023.05.002	2023
	Safety evaluation of the food enzyme alpha-amylase from the non-genetically modified Bacillus amyloliquefaciens strain BA.	EFSA Panel on Food Contact Materials; Enzymes and Processing Aids (CEP), Lambre C, Barat Baviera JM, Bolognesi C, Cocconcelli PS, Crebelli R, Gott DM, Grob K, Lampi E, Mengelers M, Mortensen A, Riviere G, Steffensen IL, Tlustos C, Van Loveren H, Vernis L, Zorn H, Roos Y, Andryszkiewicz M, Apergi K, Fernandez-Fraguas C, Liu Y, Peluso S, di Piazza G, Chesson A.	EFSA J	10.2903/j.efsa.2023.8157	2023
	Tailored photoenzymatic systems for selective reduction of aliphatic and aromatic nitro compounds fueled by light.	Lujan AP, Bhat MF, Tsaturyan S, van Merkerk R, Fu H, Poelarends GJ.	Nat Commun	10.1038/s41467-023-41194-w	2023
Metabolism	Biodegradation of crystal violet mediated by CotA from Bacillus amyloliquefaciens.	Yang J, Zhang Y, Wang S, Li S, Wang Y, Wang S, Li H.	J Biosci Bioeng	10.1016/j.jbiosc.2020.05.005	2020
	Bacillus amyloliquefaciens 40 regulates piglet performance, antioxidant capacity, immune status and gut microbiota.	Jiang Z, Su W, Li W, Wen C, Du S, He H, Zhang Y, Gong T, Wang X, Wang Y, Jin M, Lu Z.	Anim Nutr	10.1016/j.aninu.2022.09.006	2023
	Multiplex genetic engineering improves endogenous expression of mesophilic alpha-amylase gene in a wild strain Bacillus amyloliquefaciens 205.	Zhao X, Zheng H, Zhen J, Shu W, Yang S, Xu J, Song H, Ma Y.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.09.210	2020
	Molecular identification and relative abundance of microorganisms in douchi koji and salted egg white sufu during processing.	Chen YC, Liaw RB, Liao YS, Wanangkarn A, Chen WS, Tan FJ.	Anim Sci J	10.1111/asj.13567	2021
	Boosting the Biocontrol Efficacy of Bacillus amyloliquefaciens DSBA-11 through Physical and Chemical Mutagens to Control Bacterial Wilt Disease of Tomato Caused by Ralstonia solanacearum.	Yadav DK, Devappa V, Kashyap AS, Kumar N, Rana VS, Sunita K, Singh D.	Microorganisms	10.3390/microorganisms11071790	2023
Biotechnology	[Improving applicability of urease from Bacillus amyloliquefaciens JP-21 by site-directed mutagenesis].	Jia Y, Fang F.	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.190566	2020
	Screening, and Optimization of Fermentation Medium to Produce Secondary Metabolites from Bacillus amyloliquefaciens, for the Biocontrol of Early Leaf Spot Disease, and Growth Promoting Effects on Peanut (Arachis hypogaea L.).	Ahsan T, Zang C, Yu S, Pei X, Xie J, Lin Y, Liu X, Liang C.	J Fungi (Basel)	10.3390/jof8111223	2022
Pathogenicity	Potential Probiotics Bacillus subtilis KATMIRA1933 and Bacillus amyloliquefaciens B-1895 Co-Aggregate with Clinical Isolates of Proteus mirabilis and Prevent Biofilm Formation.	Algburi A, Alazzawi SA, Al-Ezzy AIA, Weeks R, Chistyakov V, Chikindas ML.	Probiotics Antimicrob Proteins	10.1007/s12602-020-09631-0	2020
	Characterization of the NRPS operon homolog for surfactin A and surfactin C synthesis in Bacillus spp.	Ito K, Adachi M, Matsutani M, Kataoka R, Enomoto G, Kajikawa A, Yokota K.	Arch Microbiol	10.1007/s00203-025-04341-z	2025
Metabolism	Enhancement of S-adenosylmethionine production by deleting thrB gene and overexpressing SAM2 gene in Bacillus amyloliquefaciens.	Jiang C, Ruan L, Wei X, Guo A.	Biotechnol Lett	10.1007/s10529-020-02945-7	2020
Metabolism	An OsNAM gene plays important role in root rhizobacteria interaction in transgenic Arabidopsis through abiotic stress and phytohormone crosstalk.	Tiwari S, Gupta SC, Chauhan PS, Lata C.	Plant Cell Rep	10.1007/s00299-020-02620-1	2021
	In Vivo Toxicity Assessment of the Probiotic Bacillus amyloliquefaciens HTI-19 Isolated from Stingless Bee (Heterotrigona itama) Honey.	Zulkhairi Amin FA, Shafiq Cheng MZ, Sabri S, Ismail N, Chan KW, Mohd Esa N, Mohd Lila MA, Nur-Fazila SH, Khalifa SAM, El-Seedi HR, Zawawi N.	Nutrients	10.3390/nu15102390	2023
	Bacteriocin producing microbes with bactericidal activity against multidrug resistant pathogens.	V A L, Mohammed Alarjani K, Malaisamy A, Balasubramanian B.	J Infect Public Health	10.1016/j.jiph.2021.09.029	2021
	Cell-to-Cell Natural Transformation Mediated Efficient Plasmid Transfer Between Bacillus Species.	Wang C, Zhao R, Yang W, Jiang W, Tang H, Du S, Chen X.	Int J Mol Sci	10.3390/ijms26020621	2025
	Effects of supplementation of Bacillus amyloliquefaciens on performance, systemic immunity, and intestinal microbiota of weaned pigs experimentally infected with a pathogenic enterotoxigenic E. coli F18.	Jinno C, Wong B, Klunemann M, Htoo J, Li X, Liu Y.	Front Microbiol	10.3389/fmicb.2023.1101457	2023
	Evaluation of seed associated endophytic bacteria from tolerant chilli cv. Firingi Jolokia for their biocontrol potential against bacterial wilt disease.	Dowarah B, Agarwal H, Krishnatreya DB, Sharma PL, Kalita N, Agarwala N.	Microbiol Res	10.1016/j.micres.2021.126751	2021
	Plant Growth Promotion and Plant Disease Suppression Induced by Bacillus amyloliquefaciens Strain GD4a.	Yang P, Yuan P, Liu W, Zhao Z, Bernier MC, Zhang C, Adhikari A, Opiyo SO, Zhao L, Banks F, Xia Y.	Plants (Basel)	10.3390/plants13050672	2024
	Antibiofilm Activity and Mechanism of Linalool against Food Spoilage Bacillus amyloliquefaciens.	Shen G, Yang L, Lv X, Zhang Y, Hou X, Li M, Zhou M, Pan L, Chen A, Zhang Z.	Int J Mol Sci	10.3390/ijms241310980	2023
	Synergistic consortium of beneficial microorganisms in rice rhizosphere promotes host defense to blight-causing Xanthomonas oryzae pv. oryzae.	Jain A, Chatterjee A, Das S.	Planta	10.1007/s00425-020-03515-x	2020
Metabolism	Synergetic degradation of waste oil by constructed bacterial consortium for rapid in-situ reduction of kitchen waste.	Ke X, Hua X, Sun JC, Zheng RC, Zheng YG.	J Biosci Bioeng	10.1016/j.jbiosc.2020.12.005	2021
	Multi-Omics Insights into the Impact of Fermented Wheat Bran-Soybean Meal-Broussonetia papyrifera Mixture Substance on the Gut Microbiota of Late Gestation Sows In Vitro.	Fu L, Chen Y, Li Y, Wang C.	Animals (Basel)	10.3390/ani15213199	2025
	Seed treatments for control of Meloidogyne graminicola in flooded rice	Soares MRC, Dias-Arieira CR, Lopes APM.	Eur J Plant Pathol	10.1007/s10658-021-02294-9	2021
	Synergistic effects of Bacillus subtilis QST 713 and L-arginine supplementation during late gestation on reproductive performance in Landrace × Yorkshire sows: A randomized controlled trial.	Khoudphaithoune T, Lanh DTK, Thanh NV, Dung BV, Sukon P, Nam NH.	Vet World	10.14202/vetworld.2025.2087-2094	2025
Transcriptome	Identification and functional analysis of non-coding regulatory small RNA FenSr3 in Bacillus amyloliquefaciens LPB-18.	Yang P, Geng C, Zhu S, Zhou Z, Bilal M, Gu C, Xu H, Ji L, Xiao B, Wang J, Qian Z, Zhao L, Zhao Y, Lu H.	PeerJ	10.7717/peerj.15236	2023
Genetics	Metagenome analysis of Citrus sinensis rhizosphere infected with Candidatus liberibacter asiaticus reveals distinct structure in bacterial communities.	Arjmand E, Moghadam A, Afsharifar A, Faghihi MM, Izadpanah K, Taghavi SM.	Sci Rep	10.1038/s41598-025-21973-9	2025
	Comparative Analysis of Microbial Communities and Biopolymer Production in Kombucha.	Nam Y, Seo G, Kim Y, Kim SR, Kim JN.	J Microbiol Biotechnol	10.4014/jmb.2508.08004	2025
Enzymology	Different unfolding pathways of homologous alpha amylases from Bacillus licheniformis (BLA) and Bacillus amyloliquefaciens (BAA) in GdmCl and urea.	Ahmad A, Mishra R.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.05.139	2020
Enzymology	Drought stress tolerance and metabolomics of Medicago sativa induced by Bacillus amyloliquefaciens DGL1.	Yang X, Xie Y, Qiao Y, Chang F, Wang T, Li J, Wu L, Li C, Gao Y.	Front Plant Sci	10.3389/fpls.2024.1378707	2024
	A novel lignin degradation bacteria-Bacillus amyloliquefaciens SL-7 used to degrade straw lignin efficiently.	Mei J, Shen X, Gang L, Xu H, Wu F, Sheng L.	Bioresour Technol	10.1016/j.biortech.2020.123445	2020
	Comparing the potential of Bacillus amyloliquefaciens CGMCC18230 with antimicrobial growth promoters for growth performance, bone development, expression of phosphorus transporters, and excreta microbiome in broiler chickens.	Li C, Cai H, Li S, Liu G, Deng X, Bryden WL, Zheng A.	Poult Sci	10.1016/j.psj.2022.102126	2022
	Microbial Primer: Biosurfactants - the ABCs of microbial surface-active metabolites.	Dagenais Roy M, Deziel E.	Microbiology (Reading)	10.1099/mic.0.001604	2025
	The fermented product of high-yield surfactin strain Bacillus subtilis LYS1 improves the growth performance and intestinal villi morphology in broilers.	Lee YS, Ku KL, Chen PY, Chen KL.	Poult Sci	10.1016/j.psj.2023.102839	2023
	Screening microbial inoculants and their interventions for cross-kingdom management of wilt disease of solanaceous crops- a step toward sustainable agriculture.	Kashyap AS, Manzar N, Meshram S, Sharma PK.	Front Microbiol	10.3389/fmicb.2023.1174532	2023
Pathogenicity	From Microbial Consortia to Ecosystem Resilience: The Integrative Roles of Holobionts in Stress Biology.	Manzanera M.	Biology (Basel)	10.3390/biology14091203	2025
Genetics	Unraveling the genome of Bacillus velezensis MEP₂18, a strain producing fengycin homologs with broad antibacterial activity: comprehensive comparative genome analysis.	Medeot D, Sannazzaro A, Estrella MJ, Torres Tejerizo G, Contreras-Moreira B, Pistorio M, Jofre E.	Sci Rep	10.1038/s41598-023-49194-y	2023
	Complete Genome Sequence of Bacillus amyloliquefaciens EA19, an Endophytic Bacterium with Biocontrol Potential Isolated from Erigeron annuus.	Zeng FS, Yuan B, Shi WQ, Gong SJ, Xiang LB, Yu DZ, Yang LJ.	Microbiol Resour Announc	10.1128/mra.00753-21	2021
Metabolism	gamma-Glutamyltranspeptidase from Bacillus amyloliquefaciens: transpeptidation activity enhancement and L-theanine production.	Li Z, Zhu R, Liu Y, Li J, Gao H, Hu N.	Enzyme Microb Technol	10.1016/j.enzmictec.2020.109644	2020
Pathogenicity	Dietary Bacillus amyloliquefaciens enhance survival of white spot syndrome virus infected crayfish.	Lai Y, Luo M, Zhu F.	Fish Shellfish Immunol	10.1016/j.fsi.2020.04.033	2020
	Isolation, Antimicrobial Effect and Metabolite Analysis of Bacillus amyloliquefaciens ZJLMBA1908 against Citrus Canker Caused by Xanthomonas citri subsp. citri.	Ke X, Wu Z, Liu Y, Liang Y, Du M, Li Y.	Microorganisms	10.3390/microorganisms11122928	2023
	Control of Alternaria leaf blight caused by Alternaria alternata on sunflower using fungicides and Bacillus amyloliquefaciens	Kgatle MG, Flett B, Truter M, Aveling TAS.	Crop Prot	10.1016/j.cropro.2020.105146	2020
	Suppression of Fusarium Wilt in Watermelon by Bacillus amyloliquefaciens DHA55 through Extracellular Production of Antifungal Lipopeptides.	Al-Mutar DMK, Alzawar NSA, Noman M, Azizullah, Li D, Song F.	J Fungi (Basel)	10.3390/jof9030336	2023
	Biocontrol of Botrytis cinerea as Influenced by Grapevine Growth Stages and Environmental Conditions.	Altieri V, Rossi V, Fedele G.	Plants (Basel)	10.3390/plants12193430	2023
	The response strategies of Colletotrichum gloeosporioides s.s. due to the stress caused by biological control agent Bacillus amyloliquefaciens deciphered by transcriptome analyses	Wang QH, Ji YP, Qu YY, Qi YK, Li DW, Liu ZY, Wu XQ.	Biol Control	10.1016/j.biocontrol.2020.104372	2020
	Assessing the Impact of Spraying an E. faecium Probiotic at Hatch and Supplementing Feed with a Triple-Strain Bacillus-Based Additive on BCO Lameness Incidence in Broiler Chickens.	Alharbi K, Dang Trieu Do A, Alqahtani A, Perera R, Thomas A, Meuter A, Alrubaye AAK.	Animals (Basel)	10.3390/ani15121765	2025
	Biological Control of Verticillium Wilt and Growth Promotion in Tomato by Rhizospheric Soil-Derived Bacillus amyloliquefaciens Oj-2.16.	Pei D, Zhang Q, Zhu X, Zhang L.	Pathogens	10.3390/pathogens12010037	2022
	Development of a real-time PCR marker targeting a new unauthorized genetically modified microorganism producing protease identified by DNA walking.	Fraiture MA, Gobbo A, Marchesi U, Verginelli D, Papazova N, Roosens NHC.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2021.109330	2021
	Evaluation of Biological Plant Protection Products for Their Ability to Induce Olive Innate Immune Mechanisms and Control Colletotrichum acutatum, the Causal Agent of Olive Anthracnose.	Varveri M, Papageorgiou AG, Tsitsigiannis DI.	Plants (Basel)	10.3390/plants13060878	2024
Metabolism	Bacillus amyloliquefaciens PDR1 from root of karst adaptive plant enhances Arabidopsis thaliana resistance to alkaline stress through modulation of plasma membrane H⁺-ATPase activity.	Li F, Shi T, Tang X, Tang M, Gong J, Yi Y.	Plant Physiol Biochem	10.1016/j.plaphy.2020.08.019	2020
	Surface-displayed phenolic acid decarboxylase for increased vinylphenolic pyranoanthocyanins in blueberry wine.	Deng H, Gu Q, Yu X, Zhou J, Liu X.	Curr Res Food Sci	10.1016/j.crfs.2024.100730	2024
	Isolation and characterization of a bioactive compound from Sphingomonas sanguinis DM with cytotoxic and molecular docking analysis.	Awad MA, Soliman HSM, El-Mashtoly SF, Mansour YE, El-Deeb B, Hammad SF.	Sci Rep	10.1038/s41598-025-99178-3	2025
	Vel1 regulates the growth of Trichoderma atroviride during co-cultivation with Bacillus amyloliquefaciens and is essential for wheat root rot control	Karuppiah V, Li Y, Sun J, Vallikkannu M, Chen J.	Biol Control	10.1016/j.biocontrol.2020.104374	2020
	Antifungal Activity and Effect of Plant-Associated Bacteria on Phenolic Synthesis of Quercus robur L.	Bilous S, Likhanov A, Boroday V, Marchuk Y, Zelena L, Subin O, Bilous A.	Plants (Basel)	10.3390/plants12061352	2023
	Transcription Factor Spo0A Regulates the Biosynthesis of Difficidin in Bacillus amyloliquefaciens.	Liu N, Sun H, Tang Z, Zheng Y, Qi G, Zhao X.	Microbiol Spectr	10.1128/spectrum.01044-23	2023
	Natural Products and Pharmacological Properties of Symbiotic Bacillota (Firmicutes) of Marine Macroalgae.	Chukwudulue UM, Barger N, Dubovis M, Luzzatto Knaan T.	Mar Drugs	10.3390/md21110569	2023
	Treatment of ammonia and nitrite in aquaculture wastewater by an assembled bacterial consortium	John EM, Krishnapriya K, Sankar TV.	Aquaculture	10.1016/j.aquaculture.2020.735390	2020
	Successful treatment of canine infective endocarditis caused by Bacillus amyloliquefaciens.	Bae H, Hwang TS, Lee HC, Jung DI, Kim SH, Yu D.	Vet Q	10.1080/01652176.2022.2033879	2022
Metabolism	CRISPRi-Based Dynamic Regulation of Hydrolase for the Synthesis of Poly-gamma-Glutamic Acid with Variable Molecular Weights.	Sha Y, Qiu Y, Zhu Y, Sun T, Luo Z, Gao J, Feng X, Li S, Xu H.	ACS Synth Biol	10.1021/acssynbio.0c00207	2020
Genetics	Characterization of cervical microbiota in cervical intraepithelial neoplasia and cervical cancer using low-coverage whole genome sequencing.	Zhang T, Gu F, Li W, Han R, Liu X, Dai C, Zhang D, Li H.	Microbiol Spectr	10.1128/spectrum.03206-24	2025
	Enhancing Maize Stress Tolerance and Productivity through Synergistic Application of Bacillus velezensis A6 and Lamiales Plant Extract, Biostimulants Suitable for Organic Farming.	Penas-Corte M, Bouzas PR, Nieto Del Rio J, Manzanera M, Barros-Rodriguez A, Fernandez-Navarro JR.	Biology (Basel)	10.3390/biology13090718	2024
Phylogeny	Cadmium phytoremediation potential of Deenanath grass (Pennisetum pedicellatum) and the assessment of bacterial communities in the rhizospheric soil.	Kumar P, Fulekar MH.	Environ Sci Pollut Res Int	10.1007/s11356-021-15667-8	2022
	Secondary Metabolism Gene Diversity and Cocultivation toward Isolation and Identification of Potent Bioactive Compounds Producing Bacterial Strains from Thailand's Natural Resources.	Phonghanpot S, Jarintanan F.	Scientifica (Cairo)	10.1155/2022/2827831	2022
	Recombinant expression and characterization of the family 5 cellulase from Bacillus velezensis in Escherichia coli BL21-CodonPlus (DE3)-RIPL.	Tran DM, Nguyen TH, Huynh TU, Pentekhina I.	Biochem Biophys Rep	10.1016/j.bbrep.2024.101898	2025
	Flagellin of Bacillus amyloliquefaciens works as a resistance inducer against groundnut bud necrosis virus in chilli (Capsicum annuum L.).	Rajamanickam S, Nakkeeran S.	Arch Virol	10.1007/s00705-020-04645-z	2020
Metabolism	Soybean Oil Regulates the Fatty Acid Synthesis II System of Bacillus amyloliquefaciens LFB112 by Activating Acetyl-CoA Levels.	Cheng Q, Li Z, Zhang J, Guo H, Ahmat M, Cheng J, Abbas Z, Hua Z, Wang J, Tong Y, Yang T, Si D, Zhang R.	Microorganisms	10.3390/microorganisms11051164	2023
	Molecular identification and relative abundance of microorganisms in douchi koji and salted egg white sufu during processing	Chen Y, Liaw R, Liao Y, Wanangkarn A, Chen W, Tan F.	Animal Science Journal.		2021
	Effects of organic acids on the chemotaxis profiles and biocontrol traits of antagonistic bacterial endophytes against root-rot disease in Panax notoginseng.	Ma L, Wang WQ, Shi R, Zhang XM, Li X, Yang YS, Mo MH.	Antonie Van Leeuwenhoek	10.1007/s10482-021-01636-1	2021
	[Effects of exogenous microorganisms on seedling growth and soil microbial community of Casuarina equisetifolia].	Bai Y, Zhou LT, Zhang C, Luo Y, Zhao YL, Lin WX, Wu ZY.	Ying Yong Sheng Tai Xue Bao	10.13287/j.1001-9332.202108.037	2021
Biotechnology	Microbial fungicides can positively affect aubergine photosynthetic properties, soil enzyme activity and microbial community structure.	Wei L, Zhu J, Zhao D, Pei Y, Guo L, Guo J, Guo Z, Cui H, Li Y, Gao J.	PeerJ	10.7717/peerj.17620	2024
	Synergistic Action of Biosynthesized Silver Nanoparticles and Culture Supernatant of Bacillus amyloliquefacience against the Soft Rot Pathogen Dickeya dadantii.	Hossain A, Luo J, Ali MA, Chai R, Shahid M, Ahmed T, M Hassan M, H Kadi R, An Q, Li B, Wang Y.	Plants (Basel)	10.3390/plants12091817	2023
	Bacillus amyloliquefaciens SC06 in the diet improves egg quality of hens by altering intestinal microbiota and the effect is diminished by antimicrobial peptide.	Xu S, Wang F, Zou P, Li X, Jin Q, Wang Q, Wang B, Zhou Y, Tang L, Yu D, Li W.	Front Nutr	10.3389/fnut.2022.999998	2022
Metabolism	Optimization of spore laccase production by Bacillus amyloliquefaciens isolated from wastewater and its potential in green biodecolorization of synthetic textile dyes.	El-Bendary MA, Ezzat SM, Ewais EA, Al-Zalama MA.	Prep Biochem Biotechnol	10.1080/10826068.2020.1786698	2021
	Potential Role of Biocontrol Agents for Sustainable Management of Fungal Pathogens Causing Canker and Fruit Rot of Pistachio in Italy.	Gusella G, Vitale A, Polizzi G.	Pathogens	10.3390/pathogens11080829	2022
	Endophytic actinomycetes promote growth and fruits quality of tomato (Solanum lycopersicum): an approach for sustainable tomato production.	Khomampai J, Jeeatid N, Kaeomuangmoon T, Pathom-Aree W, Rangseekaew P, Yosen T, Khongdee N, Chromkaew Y.	PeerJ	10.7717/peerj.17725	2024
	Identification and characterization of a putative novel bacteriocin from Bacillus velezensis G02 and its effects on the intestinal microflora in mice.	Yu M, Ma H, Peng J, Ding Y, Lin Q, Guo F, Ma Y.	BMC Microbiol	10.1186/s12866-025-04357-x	2025
Genetics	Draft Genome Sequence of Bacillus amyloliquefaciens Strain CB, a Biological Control Agent and Plant Growth-Promoting Bacterium Isolated From Cotton (Gossypium L.) Rhizosphere in Coimbatore, Tamil Nadu, India.	Sevugapperumal N, Prajapati VS, Murugavel V, Perumal R.	Front Genet	10.3389/fgene.2021.704165	2021
	Comparative Evaluation of a Disinfectant Formulation Comprising Hydrogen Peroxide, Peracetic Acid, and Acetic Acid Against Aspergillus niger, Escherichia coli, and Staphylococcus aureus on Various Surfaces in Comparison to Other Disinfectants.	Rabby MRI, Hossain MS, Chowdhury NN, Akter F, Razu MH, Ahmed ZB, Khan M.	Int J Microbiol	10.1155/ijm/2602317	2025
Metabolism	Overexpression of an endogenous raw starch digesting mesophilic alpha-amylase gene in Bacillus amyloliquefaciens Z3 by in vitro methylation protocol.	Tang S, Xu T, Peng J, Zhou K, Zhu Y, Zhou W, Cheng H, Zhou H.	J Sci Food Agric	10.1002/jsfa.10332	2020
Metabolism	Short-Term Fermented Soybeans with Bacillus amyloliquefaciens Potentiated Insulin Secretion Capacity and Improved Gut Microbiome Diversity and Intestinal Integrity To Alleviate Asian Type 2 Diabetic Symptoms.	Jeong DY, Daily JW, Lee GH, Ryu MS, Yang HJ, Jeong SY, Qiu JY, Zhang T, Park S.	J Agric Food Chem	10.1021/acs.jafc.9b07962	2020
	Growth promoter, immune response, and histopathological change of prebiotic, probiotic and synbiotic bacteria on Nile tilapia.	Ghaly FM, Hussein SHM, Awad SM, El-Makhzangy AA.	Saudi J Biol Sci	10.1016/j.sjbs.2022.103539	2023
Genetics	Biodegradation of Cholesterol by Cellulosimicrobium cellulans YS01 Isolated from the Gut of Healthy Individuals.	Sheng P, Xu Q, Zhang K, Cao X, Du X, Lin K, Yan H.	Microorganisms	10.3390/microorganisms13071451	2025
	Impact of exogenous alpha-amylases on sugar formation in straight dough wheat bread	Rebholz GF, Sebald K, Dirndorfer S, Dawid C, Hofmann T, Scherf KA.	Eur Food Res Technol	10.1007/s00217-020-03657-y	2021
	The role of soy protein degradation caused by spoilage Bacillus amyloliquefaciens in texture deterioration of yuba, a soy product	Shen G, Zheng L, Li S, Wu H, Li M, Luo Q, Yu G, Chen A, Zhang Z.	Lebensm Wiss Technol	10.1016/j.lwt.2020.109108	2020
	Genome-wide analysis of transmembrane 9 superfamily genes in wheat (Triticum aestivum) and their expression in the roots under nitrogen limitation and Bacillus amyloliquefaciens PDR1 treatment conditions.	Li F, Xi K, Li Y, Ming T, Huang Y, Zhang L.	Front Plant Sci	10.3389/fpls.2023.1324974	2023
	Bioprospecting Heavy-Metal Rhizospheres for Novel Therapeutics Against High-Priority Multi-Drug-Resistant Pseudomonas aeruginosa and Acinetobacter baumannii: A Case of Toxic to Treatment.	Millard KB, Unuofin JO, Invernizzi L, Daramola MO, Iwarere SA.	Environ Microbiol Rep	10.1111/1758-2229.70182	2025
Pathogenicity	Pharmacological properties of some mangrove sediment-associated bacillus isolates.	Rajan L, Chakraborty K, Chakraborty RD.	Arch Microbiol	10.1007/s00203-020-01999-5	2021
	A critical assessment of microbial-based antimicrobial sanitizing of inanimate surfaces in healthcare settings.	Fijan S, Kurti P, Rozman U, Sostar Turk S.	Front Microbiol	10.3389/fmicb.2024.1412269	2024
	Transcriptional landscape of Atractylodes chinensis contracting root rot.	Li Y, Liu Y, Zhang T, Ma S, Wang Y, Qiao C, Cao Y, Zhao C.	BMC Plant Biol	10.1186/s12870-025-07196-0	2025
Metabolism	Supplementation of Bacillus amyloliquefaciens AS385 culture broth powder containing 1-deoxynojirimycin in a high-fat diet altered the gene expressions related to lipid metabolism and insulin signaling in mice epididymal white adipose tissue.	Parida IS, Takasu S, Ito J, Ikeda R, Yamagishi K, Kimura T, Eitsuka T, Nakagawa K.	Food Funct	10.1039/d0fo00271b	2020
	Bacillus amyloliquefaciens LZ04 improves the resistance of Arabidopsis thaliana to high calcium stress and the potential role of lncRNA-miRNA-mRNA regulatory network in the resistance.	Li F, Shi T, He A, Huang X, Gong J, Yi Y, Zhang J.	Plant Physiol Biochem	10.1016/j.plaphy.2020.03.022	2020
	Plant-bacterial endophyte secondary metabolite matching: a case study.	Hagaggi NSA, Hagaggi NSA, Mohamed AAA.	Arch Microbiol	10.1007/s00203-020-01989-7	2020
	In Vitro Evaluation of Halotolerant Bacillus velezensis 24.5 as a Promising Probiotic with Broad-Spectrum Antimicrobial Activity.	Diguta FC, Toma RC, Matei F.	Microorganisms	10.3390/microorganisms13102240	2025
	Beneficial Effects of Bacillus amyloliquefaciens D1 Soy Milk Supplementation on Serum Biochemical Indexes and Intestinal Health of Bearded Chickens.	Du L, Chen W, Wang J, Huang L, Zheng Q, Chen J, Wang L, Cai C, Zhang X, Wang L, Zhong Q, Zhong W, Fang X, Liao Z.	Microorganisms	10.3390/microorganisms11071660	2023
	Characterization and Specific Detection of Lactobacillus paracasei-Derived Extracellular Vesicles Using Anti-p40-Modified Au Thin Film.	Lee K, Cho EG, Choi Y, Kim Y, Lee JH, Hong S.	Pharmaceutics	10.3390/pharmaceutics17050654	2025
	Five-Day Treatment with B. licheniformis Along with Classical Vancomycin Treatment Was Effective in Preserving Gut Microbiota in Patients with Clostridioides difficile Infection.	Gweon TG, Kang SB, Na SY, Oh DJ, Kim SW, Seo GS, Cho JY.	Nutrients	10.3390/nu17040641	2025
Metabolism	alpha-Glucosidase Inhibitory Activity of Fermented Okara Broth Started with the Strain Bacillus amyloliquefaciens SY07.	Gao Y, Bian W, Fang Y, Du P, Liu X, Zhao X, Li F.	Molecules	10.3390/molecules27031127	2022
	Short impact on soil microbiome of a Bacillus amyloliquefaciens QST713 based product that correlates with higher potato yield across USA.	Adamo I, Acin-Albiac M, Rottjers S, de Prado DR, Benito BM, Zamora J, Godara R, Garcia-Jimenez B, Jiang-Rempel P, Cline LC, Acedo A.	Front Plant Sci	10.3389/fpls.2024.1332840	2024
Transcriptome	Promoting cytidine biosynthesis by modulating pyrimidine metabolism and carbon metabolic regulatory networks in Bacillus subtilis.	Zhang X, Liu L, Niu P, Ye T, Ding W, Wei X, Xu J, Fang H, Liu H.	Microb Cell Fact	10.1186/s12934-025-02731-y	2025
	Endophytic bacterial communities in wild rice (Oryza officinalis) and their plant growth-promoting effects on perennial rice.	Tian Q, Gong Y, Liu S, Ji M, Tang R, Kong D, Xue Z, Wang L, Hu F, Huang L, Qin S.	Front Plant Sci	10.3389/fpls.2023.1184489	2023
	Bacillus amyloliquefaciens BLCC1-0238 Can Effectively Improve Laying Performance and Egg Quality Via Enhancing Immunity and Regulating Reproductive Hormones of Laying Hens.	Zhou Y, Li S, Pang Q, Miao Z.	Probiotics Antimicrob Proteins	10.1007/s12602-019-9524-1	2020
	ChbB increases antifungal activity of Bacillus amyloliquefaciens against Valsa mali and shows synergistic action with bacterial chitinases	Wang NN, Gao KY, Han N, Tian RZ, Zhang JL, Yan X, Huang LL.	Biol Control	10.1016/j.biocontrol.2019.104150	2020
	Novel Organomineral Complex with Prolonged Antitumor Action.	Ilinskaya O, Yakovleva G, Zelenikhin P, Kolpakov A, Kurdy W, Glukhov M, Sedov I, Kharintsev S.	Int J Mol Sci	10.3390/ijms26189205	2025
	Iturin A Potentiates Differentiation of Intestinal Epithelial Defense Cells by Modulating Keap1/Nrf2 Signaling to Mitigate Oxidative Damage Induced by Heat-Stable Enterotoxin B.	Zan GX, Qu HZ, Li XY, Peng QL, Wang XF, Li RS, Zhao YG, Yan HC, Zhou JY, Wang XQ.	Antioxidants (Basel)	10.3390/antiox14040478	2025
	Biosurfactant Production by Bacillus amyloliquefaciens C11 and Streptomyces lavendulae C27 Isolated from a Biopurification System for Environmental Applications.	Diez MC, Llafquen C, Fincheira P, Lamilla C, Briceno G, Schalchli H.	Microorganisms	10.3390/microorganisms10101892	2022
Metabolism	Characterization and synthetic biology of lipase from Bacillus amyloliquefaciens strain.	Khan MT, Kaushik AC, Rana QUA, Malik SI, Khan AS, Wei DQ, Sajjad W, Ahmad S, Ali S, Ameenullah, Irfan M.	Arch Microbiol	10.1007/s00203-020-01869-0	2020
	Metagenomic analysis of core differential microbes between traditional starter and Round-Koji-mechanical starter of Chi-flavor Baijiu.	Liang J, Deng L, Li Z, Fei Y, Bai W, Zhao W, He S, Cao R.	Front Microbiol	10.3389/fmicb.2024.1390899	2024
	Effect of dietary inclusion of indigenous probiotics on the growth and intestinal histomorphology of guinea pigs (Cavia porcellus).	Goicochea-Vargas J, Salvatierra-Alor M, Acosta-Pachorro F, Rondon-Jorge W, Caro-Magni C, Cajacuri-Aquino J, Morales-Parra E, Mialhe E, Silva M, Ratto M.	Open Vet J	10.5455/ovj.2025.v15.i7.8	2025
	Biocontrol of bacterial spot on tomato by foliar spray and growth medium application of Bacillus amyloliquefaciens and Trichoderma asperellum	Chien YC, Huang CH.	Eur J Plant Pathol	10.1007/s10658-020-01947-5	2020
	Detecting and identifying pathogens and antagonistic bacteria associated with Ginkgo biloba leaf spot disease.	Shen H, Li X, Li Z.	Front Microbiol	10.3389/fmicb.2024.1346318	2024
Metabolism	Root-Secreted Spermine Binds to Bacillus amyloliquefaciens SQR9 Histidine Kinase KinD and Modulates Biofilm Formation.	Liu Y, Feng H, Chen L, Zhang H, Dong X, Xiong Q, Zhang R.	Mol Plant Microbe Interact	10.1094/mpmi-07-19-0201-r	2020
	Knowledge graph-derived feed efficiency analysis via pig gut microbiota.	Zhang J, Jiang Q, Du Z, Geng Y, Hu Y, Tong Q, Song Y, Zhang HY, Yan X, Feng Z.	Sci Rep	10.1038/s41598-024-64835-6	2024
	Characterization of exosomes derived from IPEC-J2 treated with probiotic Bacillus amyloliquefaciens SC06 and its regulation of macrophage functions.	Xu X, Liu R, Zhou X, Zhang Z, Zhu T, Huang Y, Chai L, Wang Y, Zhao Z, Li W, Mao G.	Front Immunol	10.3389/fimmu.2022.1033471	2022
Metabolism	Transcriptome Analysis of Bacillus amyloliquefaciens Reveals Fructose Addition Effects on Fengycin Synthesis.	Lu H, Xu H, Yang P, Bilal M, Zhu S, Zhong M, Zhao L, Gu C, Liu S, Zhao Y, Geng C.	Genes (Basel)	10.3390/genes13060984	2022
	Unlocking antagonistic potential of Bacillus amyloliquefaciens KRS005 to control gray mold.	Qi HY, Wang D, Han D, Song J, Ali M, Dai XF, Zhang XJ, Chen JY.	Front Microbiol	10.3389/fmicb.2023.1189354	2023
	Approach for quick exploration of highly effective broad-spectrum biocontrol strains based on PO8 protein inhibition.	Gu M, Fu J, Yan H, Yue X, Zhao S, Zhang Q, Li P.	NPJ Sci Food	10.1038/s41538-023-00210-5	2023
Phylogeny	Genetic and Phenotypic Characteristics of a Multi-strain Probiotic for Broilers.	Neveling DP, Ahire JJ, Laubscher W, Rautenbach M, Dicks LMT.	Curr Microbiol	10.1007/s00284-019-01797-3	2020
	Volumetric oxygen transfer coefficient as fermentation control parameter to manipulate the production of either acetoin or D-2,3-butanediol using bakery waste.	Maina S, Schneider R, Alexandri M, Papapostolou H, Nychas GJ, Koutinas A, Venus J.	Bioresour Technol	10.1016/j.biortech.2021.125155	2021
Enzymology	Multienzyme supplementation alleviates the performance of hens fed diets with lower crude protein and energy levels during peak to late production phase.	Mun JY, Tajudeen H, Silvestre PN, Ha SH, Hosseindoust A, Lokhande A, Ingale S, Kim JS.	Poult Sci	10.1016/j.psj.2025.105823	2025
	Biocontrol potential of the endophytic Bacillus amyloliquefaciens YN201732 against tobacco powdery mildew and its growth promotion	Jiao R, Munir S, He P, Yang H, Wu Y, Wang J, He P, Cai Y, Wang G, He Y.	Biol Control	10.1016/j.biocontrol.2019.104160	2020
	Fusarium verticillioides of maize plant: Potentials of propitious phytomicrobiome as biocontrol agents.	Omotayo OP, Babalola OO.	Front Fungal Biol	10.3389/ffunb.2023.1095765	2023
	Pathogenic Biofilm Removal Potential of Wild-Type Lacticaseibacillus rhamnosus Strains.	Mitropoulou G, Kompoura V, Nelios G, Kourkoutas Y.	Pathogens	10.3390/pathogens12121449	2023
	Synthetic Microbial Community Members Interact to Metabolize Caproic Acid to Inhibit Potato Dry Rot Disease.	Shi H, Li W, Chen H, Meng Y, Wu H, Wang J, Shen S.	Int J Mol Sci	10.3390/ijms25084437	2024
Enzymology	Isolation of Bacillus spp. with High Fibrinolytic Activity and Performance Evaluation in Fermented Douchi.	Long J, Zhang X, Gao Z, Yang Y, Tian X, Lu M, He L, Li C, Zeng X.	J Food Prot	10.4315/jfp-20-307	2021
Metabolism	Bioproduction of 4-Vinylphenol and 4-Vinylguaiacol beta-Primeverosides Using Transformed Bamboo Cells Expressing Bacterial Phenolic Acid Decarboxylase.	Kitaoka N, Nomura T, Ogita S, Kato Y.	Appl Biochem Biotechnol	10.1007/s12010-021-03522-y	2021
	Synergistic Effects of Salt-Tolerant PGPR and Foliar Silicon on Pak Choi Antioxidant Defense Under Salt Stress.	Zhao J, Han Q, Cui B, Wang J, Hu C, Li R, Lin Y, Xu Y, Liu C.	Plants (Basel)	10.3390/plants14132065	2025
	Evaluation of an Industrial Soybean Byproduct for the Potential Development of a Probiotic Animal Feed Additive with Bacillus Species.	Mahoney R, Weeks R, Zheng T, Huang Q, Dai W, Cao Y, Liu G, Guo Y, Chistyakov V, Chikindas ML.	Probiotics Antimicrob Proteins	10.1007/s12602-019-09619-5	2020
	Bacillus amyloliquefaciens alleviates the pathological injuries in mice infected with Schistosoma japonicum by modulating intestinal microbiome.	Chen H, Sun R, Wang J, Yao S, Batool SS, Yu Z, Huang S, Huang J.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1172298	2023
	Control of Fusarium Head Blight of Wheat with Bacillus velezensis E2 and Potential Mechanisms of Action.	Ma J, Gao C, Lin M, Sun Z, Zhao Y, Li X, Zhao T, Xu X, Sun W.	J Fungi (Basel)	10.3390/jof10060390	2024
Metabolism	High-level expression of Bacillus amyloliquefaciens laccase and construction of its chimeric variant with improved stability by domain substitution.	Wang J, Yu S, Li X, Feng F, Lu L.	Bioprocess Biosyst Eng	10.1007/s00449-019-02236-0	2020
	Comparing the growth-promoting potential of Paenibacillus lentimorbus and Bacillus amyloliquefaciens in Oryza sativa L. var. Sarju-52 under suboptimal nutrient conditions.	Bisht N, Chauhan PS.	Plant Physiol Biochem	10.1016/j.plaphy.2019.11.023	2020
	Assessment of Recombinant beta-Propeller Phytase of the Bacillus Species Expressed Intracellularly in Yarrowia lipolityca.	Maloshenok LG, Panina YS, Bruskin SA, Zherdeva VV, Gessler NN, Rozumiy AV, Antonov EV, Deryabina YI, Isakova EP.	J Fungi (Basel)	10.3390/jof11030186	2025
	Control of powdery mildew (Blumeria graminis spp.) in cereals by Serenade®ASO (Bacillus amyloliquefaciens (former subtilis) strain QST 713)	Matzen N, Heick TM, Jorgensen LN.	Biol Control	10.1016/j.biocontrol.2019.104067	2019
	Effects of Bacillus amyloliquefaciens TL106 Isolated from Tibetan Pigs on Probiotic Potential and Intestinal Microbes in Weaned Piglets.	Du H, Yao W, Kulyar MF, Ding Y, Zhu H, Pan H, Li K, Bhutta ZA, Liu S, Li J.	Microbiol Spectr	10.1128/spectrum.01205-21	2022
	Transcriptional Profiling of Diffusible Lipopeptides and Fungal Virulence Genes During Bacillus amyloliquefaciens EZ1509-Mediated Suppression of Sclerotinia sclerotiorum.	Farzand A, Moosa A, Zubair M, Khan AR, Ayaz M, Massawe VC, Gao X.	Phytopathology	10.1094/phyto-05-19-0156-r	2020
	Biosynthesized silver nanoparticles using Bacillus amyloliquefaciens; Application for cytotoxicity effect on A549 cell line and photocatalytic degradation of p-nitrophenol.	Samuel MS, Jose S, Selvarajan E, Mathimani T, Pugazhendhi A.	J Photochem Photobiol B	10.1016/j.jphotobiol.2019.111642	2020
	Plant-Microbe Interaction: Mining the Impact of Native Bacillus amyloliquefaciens WS-10 on Tobacco Bacterial Wilt Disease and Rhizosphere Microbial Communities.	Ahmed W, Dai Z, Zhang J, Li S, Ahmed A, Munir S, Liu Q, Tan Y, Ji G, Zhao Z.	Microbiol Spectr	10.1128/spectrum.01471-22	2022
Metabolism	Increasing antioxidant activities of the glutamine-cysteine mixture by the glutaminase from Bacillus amyloliquefaciens.	Lin J, Sun-Waterhouse D, Cui C, Lu H.	Food Chem	10.1016/j.foodchem.2019.125701	2020
Pathogenicity	Probiotics: an Antibiotic Replacement Strategy for Healthy Broilers and Productive Rearing.	Neveling DP, Dicks LMT.	Probiotics Antimicrob Proteins	10.1007/s12602-020-09640-z	2021
Enzymology	Genome sequencing, purification, and biochemical characterization of a strongly fibrinolytic enzyme from Bacillus amyloliquefaciens Jxnuwx-1 isolated from Chinese traditional douchi.	Yang H, Yang L, Li X, Li H, Tu Z, Wang X.	J Gen Appl Microbiol	10.2323/jgam.2019.04.005	2020
Metabolism	Characterization and application of a novel laccase derived from Bacillus amyloliquefaciens.	Wang H, Huang L, Li Y, Ma J, Wang S, Zhang Y, Ge X, Wang N, Lu F, Liu Y.	Int J Biol Macromol	10.1016/j.ijbiomac.2019.11.117	2020
Enzymology	Improvement of Soluble Expression, Stability, and Activity of Acetaldehyde Lyase by Elastin-like Polypeptides Fusion for Acetoin Production from Acetaldehyde.	Lin H, Zhang J, Hu J, Ma L, Lai K, Zheng C, Yang Q, Zhang L.	Biomolecules	10.3390/biom15091216	2025
Biotechnology	Evaluation of application potential of dye-decolorizing peroxidase from Bacillus amyloliquefaciens in bioremediation of paper and pulp mill effluent.	Ren J, Li X, Zhang W, Li Z, Wang Q, Li S, Wang S, Li H.	Front Microbiol	10.3389/fmicb.2022.1031853	2022
Pathogenicity	Protective effect of Bacillus amyloliquefaciens against Salmonella via polarizing macrophages to M1 phenotype directly and to M2 depended on microbiota.	Fu A, Mo Q, Wu Y, Wang B, Liu R, Tang L, Zeng Z, Zhang X, Li W.	Food Funct	10.1039/c9fo01651a	2019
Pathogenicity	Zn(II) suppresses biofilm formation in Bacillus amyloliquefaciens by inactivation of the Mn(II) uptake.	Huang Z, Wu L, Li X, Ma L, Borriss R, Gao X.	Environ Microbiol	10.1111/1462-2920.14859	2020
	Stress tolerance in flax plants inoculated with Bacillus and Azotobacter species under deficit irrigation	Rajabi-Khamseh S, Danesh-Shahraki A, Rafieiolhossaini M.	Physiologia Plantarum.		2020
	Phenotypic and genotypic characterization of probiotic strains in the context of antimicrobial resistance.	Kerek A, Palkovicsne Pezsa N, Kaszab E, Jerzsele A, Farkas O.	Front Vet Sci	10.3389/fvets.2025.1684650	2025
Metabolism	Chitin extraction from shrimp (Litopenaeus vannamei) shells by successive two-step fermentation with Lactobacillus rhamnoides and Bacillus amyloliquefaciens.	Liu Y, Xing R, Yang H, Liu S, Qin Y, Li K, Yu H, Li P.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.01.124	2020
Enzymology	Cloning and expression of the Bacillus amyloliquefaciens transglutaminase gene in E. coli using a bicistronic vector construction.	Duarte LS, Barse LQ, Dalberto PF, da Silva WTS, Rodrigues RC, Machado P, Basso LA, Bizarro CV, Ayub MAZ.	Enzyme Microb Technol	10.1016/j.enzmictec.2019.109468	2020
	Bio-removal of tetracycline antibiotics under the consortium with probiotics Bacillus clausii T and Bacillus amyloliquefaciens producing biosurfactants.	Liu CX, Xu QM, Yu SC, Cheng JS, Yuan YJ.	Sci Total Environ	10.1016/j.scitotenv.2019.136329	2020
Enzymology	Enhanced catalytic efficiency and coenzyme affinity of leucine dehydrogenase by comprehensive screening strategy for L-tert-leucine synthesis.	Zhou F, Mu X, Nie Y, Xu Y.	Appl Microbiol Biotechnol	10.1007/s00253-021-11323-w	2021
Metabolism	Induction of in planta resistance by flagellin (Flg) and elongation factor-TU (EF-Tu) of Bacillus amyloliquefaciens (VB7) against groundnut bud necrosis virus in tomato.	Vanthana M, Nakkeeran S, Malathi VG, Renukadevi P, Vinodkumar S.	Microb Pathog	10.1016/j.micpath.2019.103757	2019
	Analysis and Evaluation of the Flagellin Activity of Bacillus amyloliquefaciens Ba168 Antimicrobial Proteins against Penicillium expansum.	Lu M, Chen Y, Li L, Ma Y, Tong Z, Guo D, Sun P, An D.	Molecules	10.3390/molecules27134259	2022
	Immune Parameters in Chickens Treated with Antibiotics and Probiotics during Early Life.	Jankowski J, Tykalowski B, Stepniowska A, Konieczka P, Koncicki A, Matusevicius P, Ognik K.	Animals (Basel)	10.3390/ani12091133	2022
Metabolism	Exopolysaccharides of Bacillus amyloliquefaciens modulate glycemic level in mice and promote glucose uptake of cells through the activation of Akt.	Chen YC, Huang SD, Tu JH, Yu JS, Nurlatifah AO, Chiu WC, Su YH, Chang HL, Putri DA, Cheng HL.	Int J Biol Macromol	10.1016/j.ijbiomac.2019.12.217	2020
	Cyclic Lipopeptides of Bacillus amyloliquefaciens DHA6 Are the Determinants to Suppress Watermelon Fusarium Wilt by Direct Antifungal Activity and Host Defense Modulation.	Al-Mutar DMK, Noman M, Abduljaleel Alzawar NS, Azizullah, Li D, Song F.	J Fungi (Basel)	10.3390/jof9060687	2023
Metabolism	Efficient Biosynthesis of Low-Molecular-Weight Poly-gamma-glutamic Acid Based on Stereochemistry Regulation in Bacillus amyloliquefaciens.	Sha Y, Huang Y, Zhu Y, Sun T, Luo Z, Qiu Y, Zhan Y, Lei P, Li S, Xu H.	ACS Synth Biol	10.1021/acssynbio.0c00080	2020
	Linalool as a potential agent for inhibiting Escherichia coli biofilm formation and exopolysaccharide production.	Wang L, Wang J, Zhang K, Zhang J, Cui D, Wang J, Ji P, Wei Y, Li J.	BMC Vet Res	10.1186/s12917-025-04681-4	2025
Phylogeny	Differentiation between Bacillus amyloliquefaciens and Bacillus subtilis isolated from a South African sugarcane processing factory using ARDRA and rpoB gene sequencing.	Nel S, Davis SB, Endo A, Dicks LMT.	Arch Microbiol	10.1007/s00203-019-01698-w	2019
	Growth, Hematobiochemical Changes, and Gut Bactericidal Potential of Atama, Heinsia crinita, Leaf Extract-Based Diet on Nile Tilapia.	Samuel B U, Adeshina I, Sabo S, Pourmozaffar S.	Scientifica (Cairo)	10.1155/sci5/5594984	2025
	Chungkookjang, a soy food, fermented with Bacillus amyloliquefaciens protects gerbils against ishcmeic stroke injury, and post-stroke hyperglycemia.	Jeong DY, Jeong SY, Zhang T, Wu X, Qiu JY, Park S.	Food Res Int	10.1016/j.foodres.2019.108769	2020
Metabolism	Bacillus amyloliquefaciens inoculation alters physiology of rice (Oryza sativa L. var. IR-36) through modulating carbohydrate metabolism to mitigate stress induced by nutrient starvation.	Bisht N, Mishra SK, Chauhan PS.	Int J Biol Macromol	10.1016/j.ijbiomac.2019.09.154	2020
	Dual RNA Sequencing Analysis of Bacillus amyloliquefaciens and Sclerotinia sclerotiorum During Infection of Soybean Seedlings by S. sclerotiorum Unveils Antagonistic Interactions.	Cheng Y, Gao X, He H, Zhang X, Wang R, Liu J.	Front Microbiol	10.3389/fmicb.2022.924313	2022
	Effects of dietary Bacillus amyloliquefaciens on the growth, immune responses, intestinal microbiota composition and disease resistance of yellow catfish, Pelteobagrus fulvidraco.	Xue M, Wu Y, Hong Y, Meng Y, Xu C, Jiang N, Li Y, Liu W, Fan Y, Zhou Y.	Front Cell Infect Microbiol	10.3389/fcimb.2022.1047351	2022
Metabolism	Secretion of Bacillus amyloliquefaciens gamma-Glutamyltranspeptidase from Bacillus subtilis and Its Application in Enzymatic Synthesis of l-Theanine.	Mu D, Li H, Chen Q, Zhu J, Wu X, Luo S, Zhao Y, Wang L, Jiang S, Li X, Zheng Z.	J Agric Food Chem	10.1021/acs.jafc.9b06140	2019
	Intrinsic tet(L) sub-class in Bacillus velezensis and Bacillus amyloliquefaciens is associated with a reduced susceptibility toward tetracycline.	Nohr-Meldgaard K, Struve C, Ingmer H, Agerso Y.	Front Microbiol	10.3389/fmicb.2022.966016	2022
	Characterization of New Fengycin Cyclic Lipopeptide Variants Produced by Bacillus amyloliquefaciens (ET) Originating from a Salt Lake of Eastern Algeria.	Ait Kaki A, Smargiasso N, Ongena M, Kara Ali M, Moula N, De Pauw E, Kacem Chaouche N.	Curr Microbiol	10.1007/s00284-019-01855-w	2020
	Purification and characterization of a novel milk-clotting enzyme produced by Bacillus amyloliquefaciens GSBa-1	Zhao X, Cai M, Yang ZJ, Luo TQ, Sarwar A, Megrous S, `Aziz T, Yang ZN.	Eur Food Res Technol	10.1007/s00217-019-03361-6	2019
	Field validation of biocontrol strategies to control brown rot on stone fruit in several European countries.	Casals C, Guijarro B, De Cal A, Torres R, Usall J, Perdrix V, Hilscher U, Ladurner E, Smets T, Teixido N.	Pest Manag Sci	10.1002/ps.6281	2021
Metabolism	Improved Production of Spores and Bioactive Metabolites from Bacillus amyloliquefaciens in Solid-state Fermentation by a Rapid Optimization Process.	Su YT, Liu C, Long Z, Ren H, Guo XH.	Probiotics Antimicrob Proteins	10.1007/s12602-018-9474-z	2019
	Synergistic efficacy of extract of Jatropha curcas seeds and enzyme extract of Serratia marcescens against Spodoptera frugiperda under greenhouse conditions.	Valdez-Ramirez A, de la Torre-Hernandez ME, Flores-Macias A, Ramirez-Zamora J, Garcia-Calderon ND, Nunez-Valdez ME, Figueroa-Brito R.	Sci Rep	10.1038/s41598-025-22057-4	2025
	Development of the First Shuttle Vector System and Optimization of Transformation in Selenomonas sputigena.	Nguyen TT, Kim YK, Ko D, Kim J, Yi H, Bang YJ.	J Microbiol Biotechnol	10.4014/jmb.2501.01011	2025
Enzymology	Effective removal of Cd²⁺, Zn²⁺ by immobilizing the non-absorbent active catalyst by packed bed column reactor for industrial wastewater treatment.	Devanesan S, AlSalhi MS.	Chemosphere	10.1016/j.chemosphere.2021.130230	2021
	Potential Plant Growth-Promoting Bacteria with Heavy Metal Resistance.	Efe D.	Curr Microbiol	10.1007/s00284-020-02208-8	2020
	The Probiotic Pediococcus acidilactici in the Feed of Salmonids: A Strategy to Improve Reproductive Parameters.	Diaz R, Carrasco D, Quinones J, Martinez A, Sepulveda G, Perez-Nunez I, Huaiquipan R, Cancino-Baier D, Beltran JF, Farias JG, Paz EA, Sepulveda N.	Animals (Basel)	10.3390/ani15111659	2025
	Bacterial inoculation positively affects the quality and quantity of flax under deficit irrigation regimes.	Rajabi-Khamseh S, Danesh Shahraki A, Rafieiolhossaini M, Saeidi K.	J Appl Microbiol	10.1111/jam.14934	2021
	Isolation, Purification, and Characterization of a Laccase-Degrading Aflatoxin B1 from Bacillus amyloliquefaciens B10.	Xiong D, Wen J, Lu G, Li T, Long M.	Toxins (Basel)	10.3390/toxins14040250	2022
Metabolism	Enhancing aerobic composting of food waste by adding hydrolytically active microorganisms.	Mironov V, Zhukov V, Efremova K, Brinton WF.	Front Microbiol	10.3389/fmicb.2024.1487165	2024
	Screening of Microorganisms Isolated from Stingless Bees' Larval Food in the Biocontrol of Meloidogyne incognita.	Nunes Moreira Costa G, Santos ACC, Dos Santos Paschoal T, Garcia APM, Dos Santos AR, Ueira-Vieira C.	J Nematol	10.2478/jofnem-2025-0028	2025
Metabolism	Amelioration of heavy metal stress by endophytic Bacillus amyloliquefaciens RWL-1 in rice by regulating metabolic changes: potential for bacterial bioremediation.	Shahzad R, Bilal S, Imran M, Khan AL, Alosaimi AA, Al-Shwyeh HA, Almahasheer H, Rehman S, Lee IJ.	Biochem J	10.1042/bcj20190606	2019
	Secretion of Bacillus amyloliquefaciens Transglutaminase from Lactococcus lactis and Its Enhancement of Food Gel Properties.	Ma T, Li X, Montalban-Lopez M, Wu X, Zheng Z, Mu D, Mu D.	Gels	10.3390/gels8100674	2022
	Probiotic Properties of Exopolysaccharide-Producing Bacteria from Natto.	Ngampuak V, Thongmee A, Pongpoungphet N, Wongwailikhit K, Kanchanaphum P.	Int J Food Sci	10.1155/2023/3298723	2023
	Effect of dietary multi-stimulants blend supplementation on performance, digestive enzymes, and antioxidants biomarkers of common carp, Cyprinus carpio L. and its resistance to ammonia toxicity	Abdel-Tawwab M, Monier MN, Abdelrhman AM, Dawood MAO.	Aquaculture	10.1016/j.aquaculture.2020.735529	2020
	Isolation of a potential probiotic strain Bacillus amyloliquefaciensLPB-18 and identification of antimicrobial compounds responsible for inhibition of food-borne pathogens.	Lu H, Yang P, Zhong M, Bilal M, Xu H, Zhang Q, Xu J, Liang N, Liu S, Zhao L, Zhao Y, Geng C.	Food Sci Nutr	10.1002/fsn3.3094	2023
	Comparison of the synthesis of the alpha-amylase enzyme by the native strain Bacillus licheniformis in immobilized and immersed cells.	Mahmoudnia F.	Iran J Microbiol	10.18502/ijm.v16i6.17261	2024
	Analysis and control of microbial gas production in fermented chili paste	Zheng Y, Chen J, Chen L, Niuyuetaohua, Shi L, Wan S, Wang M.	Journal of food processing and preservation.	10.1111/jfpp.14806	2020
	Effect of copy number of the spoVA2mob operon, sourdough and reutericyclin on ropy bread spoilage caused by Bacillus spp.	Li Z, Siepmann FB, Rojas Tovar LE, Chen X, Ganzle MG.	Food Microbiol		2020
Enzymology	Identification of a Spermidine Synthase Gene from Soybean by Recombinant Expression, Transcriptional Verification, and Sequence Analysis.	Zou D, Min Y, Liu Y, Wei X, Wang J.	J Agric Food Chem	10.1021/acs.jafc.9b07443	2020
Transcriptome	Study on the Effect of Sooty Mould Disease in Tea Plants.	Liu R, Liu H, Wang Y, Chen J, Qiu Z, Zheng Y, Sun B, Tan X, Shu C, Liu S, Zheng P.	Plants (Basel)	10.3390/plants13162321	2024
Pathogenicity	Effects of the probiotic Bacillus amyloliquefaciens on the growth, immunity, and disease resistance of Haliotis discus hannai.	Xiaolong G, Caihuan K, Mo Z, Xian L, Fucun W, Ying L.	Fish Shellfish Immunol	10.1016/j.fsi.2019.08.067	2019
	A Synergistic Role of Photosynthetic Bacteria and Fungal Community in Pollutant Removal in an Integrated Aquaculture Wastewater Bioremediation System.	Ramzan MN, Shen D, Wei Y, Raza B, Yuan H, Emmanuel A, Mushtaq Z, Zheng Z.	Biology (Basel)	10.3390/biology14080959	2025
	Degradation of the phenolic beta-ether lignin model dimer and dyes by dye-decolorizing peroxidase from Bacillus amyloliquefaciens	Yang J, Gao T, Li H, Li S, Wang S, Wang S, Zhang Y.	Biotechnol Lett		2019
Metabolism	Degradation of the phenolic beta-ether lignin model dimer and dyes by dye-decolorizing peroxidase from Bacillus amyloliquefaciens.	Yang J, Gao T, Zhang Y, Wang S, Li H, Li S, Wang S.	Biotechnol Lett	10.1007/s10529-019-02696-0	2019
Metabolism	Bacillus amyloliquefaciens FH-1 significantly affects cucumber seedlings and the rhizosphere bacterial community but not soil.	Wang J, Xu S, Yang R, Zhao W, Zhu D, Zhang X, Huang Z.	Sci Rep	10.1038/s41598-021-91399-6	2021
	Bacillus amyloliquefaciens Rescues Glycyrrhizic Acid Loss Under Drought Stress in Glycyrrhiza uralensis by Activating the Jasmonic Acid Pathway.	Yue L, Uwaremwe C, Tian Y, Liu Y, Zhao X, Zhou Q, Wang Y, Zhang Y, Liu B, Cui Z, Dun C, Wang R.	Front Microbiol	10.3389/fmicb.2021.798525	2021
	A single honey proteome dataset for identifying adulteration by foreign amylases and mining various protein markers natural to honey.	Erban T, Shcherbachenko E, Talacko P, Harant K.	J Proteomics	10.1016/j.jprot.2021.104157	2021
	Automation-aided construction and characterization of Bacillus subtilis PrsA strains for the secretion of amylases.	Hamburger F, Schlichting N, Eichenlaub M, Costea PI, Sauer C, Jenewein S, Kabisch J.	Front Bioeng Biotechnol	10.3389/fbioe.2024.1479626	2024
	Bacilysin within the Bacillus subtilis group: gene prevalence versus antagonistic activity against Gram-negative foodborne pathogens.	Nannan C, Vu HQ, Gillis A, Caulier S, Nguyen TTT, Mahillon J.	J Biotechnol	10.1016/j.jbiotec.2020.12.017	2021
Metabolism	Di-n-butyl phthalate degrading endophytic bacterium Bacillus amyloliquefaciens subsp. strain JR20 isolated from garlic chive and its colonization in a leafy vegetable.	Yuan L, Cheng J, Chu Q, Ji X, Yuan J, Feng F, Gao R, Yu X.	J Environ Sci Health B	10.1080/03601234.2019.1633211	2019
	Bacillus amyloliquefaciens HZ-12 heterologously expressing NdmABCDE with higher ability of caffeine degradation	Jiang Y, Lu Y, Huang Y, Chen S, Ji Z.	Lebensm Wiss Technol	10.1016/j.lwt.2019.04.033	2019
	Protective potential of selected microbial and non-microbial biostimulants against Zymoseptoria tritici leaf blotch in winter wheat as affected by the form of N supply.	Gobel M, Dulal S, Sommer L, Weinmann M, Mamun AA, Ahmed A, Sujeeth N, Mai K, Neumann G, Muller T, Bradacova K.	Front Plant Sci	10.3389/fpls.2024.1407585	2024
	Identification of Lipopeptide Iturin A Produced by Bacillus amyloliquefaciens NCPSJ7 and Its Antifungal Activities against Fusarium oxysporum f. sp. niveum.	Wang J, Qiu J, Yang X, Yang J, Zhao S, Zhou Q, Chen L.	Foods	10.3390/foods11192996	2022
	Occurrence of caffeoylquinic acids in bamboo suspension cells cultured under light.	Ube N, Kato Y, Nomura T.	Plant Biotechnol (Tokyo)	10.5511/plantbiotechnology.24.0812a	2024
Pathogenicity	Effects of Bacillus amyloliquefaciens XJ-BV2007 on Growth of Alternaria alternata and Production of Tenuazonic Acid.	Jia Q, Fan Y, Duan S, Qin Q, Ding Y, Yang M, Wang Y, Liu F, Wang C.	Toxins (Basel)	10.3390/toxins15010053	2023
	Effects of dietary Bacillus amyloliquefaciens CECT 5940 supplementation on growth performance, antioxidant status, immunity, and digestive enzyme activity of broilers fed corn-wheat-soybean meal diets.	Sun Y, Zhang Y, Liu M, Li J, Lai W, Geng S, Yuan T, Liu Y, Di Y, Zhang W, Zhang L.	Poult Sci	10.1016/j.psj.2021.101585	2022
Pathogenicity	In Vitro and In Vivo Anti-Clostridioides difficile Effect of a Probiotic Bacillus amyloliquefaciens Strain.	Islam MI, Seo H, Redwan A, Kim S, Lee S, Siddiquee M, Song HY.	J Microbiol Biotechnol	10.4014/jmb.2107.07057	2022
	Media formulation using statistical methodology to enhance alpha-amylase production for green synthesis of Au-NPs by Bacillus subtilis VSP4 under solid-state fermentation.	Prajapati VS, Mehta VN, Patel SK.	Front Bioeng Biotechnol	10.3389/fbioe.2025.1569902	2025
	Bio-protection of brown spot disease of rice and insight into the molecular basis of interaction between Oryza sativa, Bipolaris oryzae and Bacillus amyloliquefaciens	Prabhukarthikeyan SR, Yadav MK, Anandan A, Aravindan S, Keerthana U, Raghu E, Baite MS, Parameswaran C, Panneerselvam P, Rath PC.	Biol Control	10.1016/j.biocontrol.2019.104018	2019
	Characterization of soybean chitinase genes induced by rhizobacteria involved in the defense against Fusarium oxysporum.	Chen JY, Sang H, Chilvers MI, Wu CH, Chang HX.	Front Plant Sci	10.3389/fpls.2024.1341181	2024
	Recent nutritional strategies and feed additives to stimulate proper rumen development in young goats.	Abdelsattar MM, Zhao W, Diaby M, Vargas-Bello-Perez E, Zhang N.	Transl Anim Sci	10.1093/tas/txae164	2025
Pathogenicity	New Levan-Type Exopolysaccharide from Bacillus amyloliquefaciens as an Antiadhesive Agent against Enterotoxigenic Escherichia coli.	Cai G, Liu Y, Li X, Lu J.	J Agric Food Chem	10.1021/acs.jafc.9b03234	2019
	The Effects of Dietary Bacillus amyloliquefaciens TL106 Supplementation, as an Alternative to Antibiotics, on Growth Performance, Intestinal Immunity, Epithelial Barrier Integrity, and Intestinal Microbiota in Broilers.	Bao C, Zhang W, Wang J, Liu Y, Cao H, Li F, Liu S, Shang Z, Cao Y, Dong B.	Animals (Basel)	10.3390/ani12223085	2022
Genetics	Comparative genomics of Bacillus velezensis and Bacillus subtilis reveals distinction and evolution of lipopeptide antimicrobial gene clusters.	Zeng Q, Zhao Y, Zhuang L, Jiang W, Wang L, Zhang J, Wang L, Guo H, Li Y, Wang Z, Li Y, Wang Q.	BMC Genomics	10.1186/s12864-025-12234-0	2025
Transcriptome	An Efficient Prephenate Dehydrogenase Gene for the Biosynthesis of L-tyrosine: Gene Mining, Sequence Analysis, and Expression Optimization.	Ji A, Bao P, Ma A, Wei X.	Foods	10.3390/foods12163084	2023
Genetics	Genome-wide investigation of GRAM-domain containing genes in rice reveals their role in plant-rhizobacteria interactions and abiotic stress responses.	Tiwari S, Shweta S, Prasad M, Lata C.	Int J Biol Macromol	10.1016/j.ijbiomac.2019.11.162	2020
	Pathogen Identification, Antagonistic Microbe Screening, and Biocontrol Strategies for Aconitum carmichaelii Root Rot.	Dai X, He Y, Su Y, Mo H, Li W, Li W, Zi S, Liu L, Di Y.	Microorganisms	10.3390/microorganisms13092202	2025
Phylogeny	[Isolation, Identification, and Degrading Characteristics of an Oil Resistant Formaldehyde-Degrading Bacterium].	Han X, Wang RR, Shi CZ.	Huan Jing Ke Xue	10.13227/j.hjkx.202003282	2020
Pathogenicity	Cylindracin, a Fruiting Body-Specific Protein of Cyclocybe cylindracea, Represses the Egg-Laying and Development of Caenorhabditis elegans and Drosophila melanogaster.	Kuratani Y, Matsumoto A, Shigenaga A, Miyahara K, Ekino K, Saigusa N, Ohta H, Iwata M, Ando S.	Toxins (Basel)	10.3390/toxins17030118	2025
	Biodiversity and antimicrobial potential of bacterial endophytes from halophyte Salicornia brachiata.	Singh S, Ghadge VA, Kumar P, Mathew DE, Dhimmar A, Sahastrabudhe H, Nalli Y, Rathod MR, Shinde PB.	Antonie Van Leeuwenhoek	10.1007/s10482-021-01544-4	2021
	Optimization of Bacillus amyloliquefaciens BLB369 Culture Medium by Response Surface Methodology for Low Cost Production of Antifungal Activity.	Zalila-Kolsi I, Kessentini S, Tounsi S, Jamoussi K.	Microorganisms	10.3390/microorganisms10040830	2022
	Improving the productive performance of growing lambs using prebiotic and probiotic as growth promoters.	Shoukry MM, El-Nomeary YAAE, Salman FM, Shakweer WME.	Trop Anim Health Prod	10.1007/s11250-023-03752-8	2023
	Probiotic Potential of the Farmed Olive Flounder, Paralichthys olivaceus, Autochthonous Gut Microbiota.	Niu KM, Kothari D, Lee WD, Zhang Z, Lee BJ, Kim KW, Wu X, Han HS, Khosravi S, Lee SM, Kim SK.	Probiotics Antimicrob Proteins	10.1007/s12602-021-09762-y	2021
	Is allelochemical synthesis in Casuarina equisetifolia plantation related to litter microorganisms?	Xu Z, Zuo L, Zhang Y, Huang R, Li L.	Front Plant Sci	10.3389/fpls.2022.1022984	2022
Metabolism	Kinetic and equilibrium of U(VI) biosorption onto the resistant bacterium Bacillus amyloliquefaciens.	Liu L, Liu J, Liu X, Dai C, Zhang Z, Song W, Chu Y.	J Environ Radioact	10.1016/j.jenvrad.2019.03.008	2019
Metabolism	Glucose limitation and glucose uptake rate determines metabolite production and sporulation in high cell density continuous cultures of Bacillus amyloliquefaciens 83.	Cristiano-Fajardo SA, Flores C, Flores N, Tinoco-Valencia R, Serrano-Carreon L, Galindo E.	J Biotechnol	10.1016/j.jbiotec.2019.04.027	2019
Enzymology	In vitro Assessment of the Probiotic Characteristics of Three Bacillus Species from the Gut of Nile Tilapia, Oreochromis niloticus.	Kuebutornye FKA, Lu Y, Abarike ED, Wang Z, Li Y, Sakyi ME.	Probiotics Antimicrob Proteins	10.1007/s12602-019-09562-5	2020
	Biocontrol activity and putative mechanism of Bacillus amyloliquefaciens (SF14 and SP10), Alcaligenes faecalis ACBC1, and Pantoea agglomerans ACBP1 against brown rot disease of fruit.	Lahlali R, Aksissou W, Lyousfi N, Ezrari S, Blenzar A, Tahiri A, Ennahli S, Hrustic J, MacLean D, Amiri S.	Microb Pathog	10.1016/j.micpath.2019.103914	2020
	Stress tolerance in flax plants inoculated with Bacillus and Azotobacter species under deficit irrigation.	Rajabi-Khamseh S, Danesh-Shahraki A, Rafieiolhossaini M.	Physiol Plant	10.1111/ppl.13154	2020
	In silico identification and characterization of antineoplastic asparaginase enzyme from endophytic bacteria.	Zadeh Hosseingholi E, Neghabi N, Molavi G, Gheibi Hayat SM, Shahriarpour H.	IUBMB Life	10.1002/iub.2237	2020
Biotechnology	Microbiological Quality of High-Demand Food from Three Major Cities in Ecuador.	Salazar-Llorente E, Morales M, Sornoza I, Mariduena-Zavala MG, Gu G, Nou X, Ortiz J, Maldonado-Alvarado P, Cevallos-Cevallos JM.	J Food Prot	10.4315/jfp-20-271	2021
	Synthetic microbial community SMC-L1 optimizes flavor chemistry in reduced salt soy sauce via targeted metabolic reprogramming.	Gao Y, Zhang L, Zhang Y, Huang J, Wu C, Zhou R.	Front Microbiol	10.3389/fmicb.2025.1701479	2025
	Microbe-Friendly Plants Enable Beneficial Interactions with Soil Rhizosphere Bacteria by Lowering Their Defense Responses.	Arkhipov A, Shao Z, Muirhead SR, Harry MS, Batool M, Mirzaee H, Carvalhais LC, Schenk PM.	Plants (Basel)	10.3390/plants13213065	2024
	Potential of Bacillus amyloliquefaciens for biocontrol of bacterial canker of tomato incited by Clavibacter michiganensis ssp. michiganensis.	Gautam S, Chauhan A, Sharma R, Sehgal R, Shirkot CK.	Microb Pathog	10.1016/j.micpath.2019.03.006	2019
	Unleashing rhizobacteria for sustainable soil remediation: PGPR roles in heavy metal tolerance, detoxification, and plant productivity.	Kaushal P, Pati AM.	Front Microbiol	10.3389/fmicb.2025.1662000	2025
	Identification of a di-glucose conjugate of 4-hydroxybenzoic acid in bamboo cells expressing bacterial 4-hydroxycinnamoyl-CoA hydratase/lyase.	Ube N, Kato Y, Nomura T.	Plant Biotechnol (Tokyo)	10.5511/plantbiotechnology.23.1218a	2024
	Effect of Culture Supernatant of Clostridium butyricum TO-A on Human DNA-Repair-Factor-Encoding Gene Promoters.	Takaoka S, Ishii T, Umihara Y, Otani R, Akazawa S, Oda T, Ogino Y, Okino Y, Wang DS, Uchiumi F.	Int J Mol Sci	10.3390/ijms252212151	2024
Phylogeny	Bacillus altitudinis: a sustainable mosquito controlling biopesticide isolated from the rhizospheric soil of Nypa fruticans in mangrove forest.	Hossain MS, Anjum MF, Rabbani MA, Hasan MR, Sohag MMH, Tasnim N, Karmakar D, Akter S, Rahman MM, Karim MR.	BMC Microbiol	10.1186/s12866-025-04168-0	2025
	Sustainable production of bacterial nanocellulose from date fruit waste using Bacillus haynesii for waste valorisation and crystal violet dye removal.	Makharita RR, El-Ahmady El-Naggar N, Baghdadi AM, Hamouda RA.	Sci Rep	10.1038/s41598-025-04711-z	2025
	Exploring Mechanisms of Antifungal Lipopeptide Iturin A from Bacillus against Aspergillus niger.	Wang S, Xu M, Han Y, Zhou Z.	J Fungi (Basel)	10.3390/jof10030172	2024
Metabolism	An Investigation on DNA Binding, Cleavage and Antimicrobial Properties of Mononuclear Co(II), Ni(II) and Cu(II) Complexes Derived from N, O Donor Schiff Bases.	Rambabu A, Ganji N, Daravath S, Ramesh G, Shivaraj.	J Fluoresc	10.1007/s10895-020-02614-y	2020
	Diversity and community structure of endophytic Bacillus with antagonistic and antioxidant activity in the fruits of Xisha Wild Noni (Morinda citrifolia L.).	Sun B, Jing R, Wang Z, Tian L, Mao F, Liu Y.	Microb Pathog	10.1016/j.micpath.2021.105065	2021
	Identification of a New Antifungal Peptide W1 From a Marine Bacillus amyloliquefaciens Reveals Its Potential in Controlling Fungal Plant Diseases.	Wen Q, Liu R, Ouyang Z, He T, Zhang W, Chen X.	Front Microbiol	10.3389/fmicb.2022.922454	2022
Metabolism	Soybean Fermented with Bacillus amyloliquefaciens (Cheonggukjang) Ameliorates Atopic Dermatitis-Like Skin Lesion in Mice by Suppressing Infiltration of Mast Cells and Production of IL-31 Cytokine.	Cho BO, Shin JY, Kim JS, Che DN, Kang HJ, Jeong DY, Jang SI.	J Microbiol Biotechnol	10.4014/jmb.1812.12046	2019
Metabolism	Characterization of a Regulator pgsR on Endogenous Plasmid p2Sip and Its Complementation for Poly(gamma-glutamic acid) Accumulation in Bacillus amyloliquefaciens.	Qiu Y, Zhu Y, Zhang Y, Sha Y, Xu Z, Li S, Feng X, Xu H.	J Agric Food Chem	10.1021/acs.jafc.9b00332	2019
	Biocontrol Agents Inhibit Banana Fusarium Wilt and Alter the Rooted Soil Bacterial Community in the Field.	Du C, Yang D, Jiang S, Zhang J, Ye Y, Pan L, Fu G.	J Fungi (Basel)	10.3390/jof10110771	2024
	Biocontrol Potential of Bacillus velezensis RS65 Against Phytophthora infestans: A Sustainable Strategy for Managing Tomato Late Blight.	Elhjouji H, Qessaoui R, Houmairi H, Dari K, Bencharki B, Mayad EH, Aassila H.	Microorganisms	10.3390/microorganisms13030656	2025
	Culturomics- and metagenomics-based insights into the soil microbiome preservation and application for sustainable agriculture.	Clagnan E, Costanzo M, Visca A, Di Gregorio L, Tabacchioni S, Colantoni E, Sevi F, Sbarra F, Bindo A, Nolfi L, Magarelli RA, Trupo M, Ambrico A, Bevivino A.	Front Microbiol	10.3389/fmicb.2024.1473666	2024
Biotechnology	Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing.	Fraiture MA, Bogaerts B, Winand R, Deckers M, Papazova N, Vanneste K, De Keersmaecker SCJ, Roosens NHC.	Sci Rep	10.1038/s41598-020-63987-5	2020
Metabolism	Comparative Genome Analysis Reveals Phylogenetic Identity of Bacillus velezensis HNA3 and Genomic Insights into Its Plant Growth Promotion and Biocontrol Effects.	Zaid DS, Cai S, Hu C, Li Z, Li Y	Microbiol Spectr	10.1128/spectrum.02169-21	2022
Cultivation	Control Efficacy of Bacillus velezensis AFB2-2 against Potato Late Blight Caused by Phytophthora infestans in Organic Potato Cultivation.	Kim MJ, Shim CK, Park JH	Plant Pathol J	10.5423/PPJ.FT.09.2021.0138	2021
Cultivation	Triaging of Culture Conditions for Enhanced Secondary Metabolite Diversity from Different Bacteria.	Schwarz J, Hubmann G, Rosenthal K, Lutz S	Biomolecules	10.3390/biom11020193	2021
Genetics	Complete Genome of Bacillus velezensis CMT-6 and Comparative Genome Analysis Reveals Lipopeptide Diversity.	Deng Q, Wang R, Sun D, Sun L, Wang Y, Pu Y, Fang Z, Xu D, Liu Y, Ye R, Yin S, Xie S, Gooneratne R	Biochem Genet	10.1007/s10528-019-09927-z	2019
	Bacillus amyloliquefaciens, Bacillus velezensis, and Bacillus siamensis Form an "Operational Group B. amyloliquefaciens" within the B. subtilis Species Complex.	Fan B, Blom J, Klenk HP, Borriss R	Front Microbiol	10.3389/fmicb.2017.00022	2017
Genetics	Genome and transcriptome analysis of surfactin biosynthesis in Bacillus amyloliquefaciens MT45.	Zhi Y, Wu Q, Xu Y	Sci Rep	10.1038/srep40976	2017
Enzymology	Characterization of a Mannose-6-Phosphate Isomerase from Bacillus amyloliquefaciens and Its Application in Fructose-6-Phosphate Production.	Sigdel S, Singh R, Kim TS, Li J, Kim SY, Kim IW, Jung WS, Pan CH, Kang YC, Lee JK	PLoS One	10.1371/journal.pone.0131585	2015
Genetics	Complete genome sequence of Bacillus amyloliquefaciens TA208, a strain for industrial production of guanosine and ribavirin.	Zhang G, Deng A, Xu Q, Liang Y, Chen N, Wen T	J Bacteriol	10.1128/JB.00440-11	2011
Genetics	Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42.	Ruckert C, Blom J, Chen X, Reva O, Borriss R	J Biotechnol	10.1016/j.jbiotec.2011.01.006	2011
Metabolism	Phytate utilization by genetically engineered lysine-producing Corynebacterium glutamicum.	Tzvetkov MV, Liebl W	J Biotechnol	10.1016/j.jbiotec.2008.02.005	2008
Biotechnology	Cell growth and alpha-amylase production characteristics of Bacillus amyloliquefaciens.	Roychoudhury S, Parulekar SJ, Weigand WA	Biotechnol Bioeng	10.1002/bit.260330209	1989
Phylogeny	Bacteriophage SPO2-mediated plasmid transduction in transpositional mutagenesis within the genus Bacillus.	Kopec LK, Yasbin RE, Marrero R	J Bacteriol	10.1128/jb.164.3.1283-1287.1985	1985
Genetics	Bacillus ayatagriensis sp. nov., a novel plant growth-promoting rhizobacteria strain isolated from mulberry rhizosphere.	Das S, Mondal R, Mandal P, Kurt H, Chakraborty J, Islam MM, Sarkar B, Shaw S, Manna S, Arabaci N, Jangid K, Sadat A, Gangopadhyay D, Kati A, Mandal AK.	Sci Rep	10.1038/s41598-025-05508-w	2025
Phylogeny	Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons.	Borriss R, Chen XH, Rueckert C, Blom J, Becker A, Baumgarth B, Fan B, Pukall R, Schumann P, Sproer C, Junge H, Vater J, Puhler A, Klenk HP	Int J Syst Evol Microbiol	10.1099/ijs.0.023267-0	2010

References

#2015	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#24474	F. G. Priest, M. Goodfellow, L. A. Shute, R. C. W. Berkeley: Bacillus amyloliquefaciens sp. nov., nom. rev.. IJSEM 37: 69 - 71 1987 ( DOI 10.1099/00207713-37-1-69 )
#35323	; Curators of the CIP;
#49266	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28519
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116352	Collection of Institut Pasteur ; Curators of the CIP; CIP 103265
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Bacillus amyloliquefaciens (DSM 7, ATCC 23350, CCUG 28519)

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