Name: Natrinema salaciae MDB20
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5894

Type strain:

Species: Natrinema salaciae

Strain Designation: MDB20

Culture col. no.: DSM 25054, JCM 17868

Strain history: M. S. da Costa MDB20.

NCBI tax ID(s): 1186196 (species)

SI-ID 401057

DSM 25054

Other strains from Natrinema salaciae

N. salaciae MDB25, DSM 25055, CECT 8172, JCM ... (type strain)

Section

Natrinema salaciae MDB20 is a thermophilic archaeon that was isolated from anoxic brine.

thermophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Halobacteria*
	Order	*Natrialbales*
	Family	*Natrialbaceae*
	Genus	*Natrinema*
	Species	**Natrinema salaciae**
	Full Scientific Name (LPSN)	Natrinema salaciae Albuquerque et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #17827]

Incubation period

3-7 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17827]

Culture medium

HALOBACTERIA MEDIUM (DSMZ Medium 372)

[Ref.: #17827]

Culture medium growth

[Ref.: #17827]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17827]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #17827]			growth	45 °C
[Ref.: #67770]			growth	45 °C

[Ref.: #17827]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-8, MK-8(H₂)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17827]	Sample type/isolated from	anoxic brine
[Ref.: #17827]	Geographic location (country and/or sea, region)	Eastern Mediterranean Sea, Lake Medee (34°19.778'N and 22°31.341'E) at a depth of 3050 m
[Ref.: #17827]	Country	Italy
[Ref.: #17827]	Country ISO 3 Code	ITA
[Ref.: #17827]	Continent	Europe
[Ref.: #17827]	Geographic location	34.3296°/22.5224°

[Ref.: #67770]	Sample type/isolated from	Brine from Lake Medee, at a depth of 3050 m
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	-
#Condition	#Anoxic (anaerobic)	-
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JQ669384 (>99% sequence identity) for Natrinema salaciae subclade from Microbeatlas

Aquatic Samples
Soil Samples	1
Animal Samples
Plant Samples
Total Samples	1

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17827]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17827]	Natrinema salaciae strain MDB20 16S ribosomal RNA gene, partial sequence	JQ669384	1454	ENA	1186196 tax ID

[Ref.: #67770]

GC-content

64.6 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #17827]

Culture collection no.

DSM 25054, JCM 17868

[Ref.: #75374]

SI-ID 401057

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Natrinema salaciae sp. nov., a halophilic archaeon isolated from the deep, hypersaline anoxic Lake Medee in the Eastern Mediterranean Sea.	Albuquerque L, Taborda M, La Cono V, Yakimov M, da Costa MS	Syst Appl Microbiol	10.1016/j.syapm.2012.06.005	2012	*

References

#17827

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25054

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75374

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401057.1 )

* These data were automatically processed and therefore are not curated

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