Name: Geobacter sp. VeEG4
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5795

Type strain:

Species: Geobacter sp.

Strain Designation: VeEG4

Culture col. no.: DSM 11264

Strain history: <- P. H. Janssen, Univ. Melbourne, Australia; VeEG4 <- P. H. Janssen {1994}

NCBI tax ID(s): 46610 (species)

SI-ID 400057

DSM 11264

Other strains from Geobacter sp.

G. sp. RE1, DSM 2909
G. sp. Ra 6, DSM 9736
G. sp. SOBY 22, DSM 11489
G. sp. NE23-3, DSM 17541
G. sp. IFRC128, DSM 24453
G. sp. Ben, DSM 26175

Section

Geobacter sp. VeEG4 is an anaerobe, mesophilic bacterium that was isolated from anoxic rice paddy soil.

anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfuromonadales*
	Family	*Geobacteraceae*
	Genus	*Geobacter*
	Full Scientific Name (LPSN)	Geobacter Lovley et al. 1995

	Synonym	"Geomobilibacter"
	Synonym	Trichlorobacter

Information on morphological and physiological properties Morphology

[Ref.: #4271]

Incubation period

3-7 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4271]

Culture medium

PELOBACTER PROPIONICUS MEDIUM (FRESHWATER) (DSMZ Medium 298)

[Ref.: #4271]

Culture medium growth

[Ref.: #4271]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4271]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4271]			growth	30 °C

[Ref.: #4271]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #4271]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4271]	Sample type/isolated from	anoxic rice paddy soil
[Ref.: #4271]	Geographic location (country and/or sea, region)	Vercelli
[Ref.: #4271]	Country	Italy
[Ref.: #4271]	Country ISO 3 Code	ITA
[Ref.: #4271]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Field
#Environmental	#Terrestrial	#Soil
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY737507 (>99% sequence identity) for Geobacter sp. from Microbeatlas

Aquatic Samples	5
Soil Samples	39
Animal Samples
Plant Samples	2
Total Samples	46

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4271]	Geobacter hephaestius 16S ribosomal RNA gene, partial sequence	AY737507	1427	ENA	293884 tax ID

Availability in culture collections External links

[Ref.: #4271]

Culture collection no.

DSM 11264

[Ref.: #75274]

SI-ID 400057

References

#4271

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11264

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75274

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400057.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Geobacter sp. in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF