Geobacter sp. (DSM 17541, NE23-3)

Name: Geobacter sp. (DSM 17541, NE23-3)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130338

Type strain

Strain Designation NE23-3

Culture col. no. DSM 17541 NE23-3

NCBI tax ID(s) 46610

Special Collections DSMZ

Links

NE23-3 is an anaerobe, mesophilic prokaryote that was isolated from anaerobic mesophilic digested sludge.

anaerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 398525

DSM 17541

@ref 20215

Last LPSN update 2025-12-16 10:00:58

Domain Pseudomonadati

Phylum Thermodesulfobacteriota

Class Desulfuromonadia

Order Geobacterales

Family Geobacteraceae

Genus Geobacter

Full scientific name Geobacter Lovley et al. 1995

Synonyms (2)

"Geomobilibacter"
Trichlorobacter

Morphology

Colony morphology

21895

Incubation period2-3 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21895	PELOBACTER PROPIONICUS MEDIUM (FRESHWATER) (DSMZ Medium 298)		Medium recipe at MediaDive	Name: PELOBACTER PROPIONICUS MEDIUM (FRESHWATER) (DSMZ Medium 298) Composition: Na2CO3 1.5 g/l NaCl 1.0 g/l 2,3-butanediol 0.9 g/l KCl 0.5 g/l MgCl2 x 6 H2O 0.4 g/l Na2S x 9 H2O 0.36 g/l NH4Cl 0.25 g/l KH2PO4 0.2 g/l CaCl2 x 2 H2O 0.15 g/l HCl 0.0025 g/l FeCl2 x 4 H2O 0.0015 g/l Sodium resazurin 0.0005 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l H3BO3 6e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
21895	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

21895

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Mud (Sludge)
#Condition	#Anoxic (anaerobic)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
21895	anaerobic mesophilic digested sludge	Niigata, Nagaoka	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB231802 (>99% sequence identity) for Geobacter sp. from Microbeatlas

Aquatic Samples	136
Soil Samples	5
Animal Samples	4
Plant Samples	2
Total Samples	147

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21895	Anaerobic syntrophic bacterium NE23-3 gene for 16S rRNA, partial sequence	AB231802	1477		340094

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21895	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17541
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us