Geobacter metallireducens GS-15 is an anaerobe bacterium that was isolated from mud.
anaerobe genome sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Thermodesulfobacteriota |
| Class Desulfuromonadia |
| Order Geobacterales |
| Family Geobacteraceae |
| Genus Geobacter |
| Species Geobacter metallireducens |
| Full scientific name Geobacter metallireducens Lovley et al. 1995 |
| @ref | Gram stain | Confidence | |
|---|---|---|---|
| 125438 | negative | 94.437 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 3051 | GEOBACTER MEDIUM (DSMZ Medium 579) | Medium recipe at MediaDive | Name: GEOBACTER MEDIUM (DSMZ Medium 579) Composition: Fe(III) citrate 13.5509 g/l Na-acetate 2.4728 g/l NaHCO3 2.4728 g/l NH4Cl 1.48368 g/l NaH2PO4 0.593472 g/l KCl 0.098912 g/l MgSO4 x 7 H2O 0.0296736 g/l Nitrilotriacetic acid 0.0148368 g/l NaCl 0.0098912 g/l MnSO4 x H2O 0.0049456 g/l CoSO4 x 7 H2O 0.00178042 g/l ZnSO4 x 7 H2O 0.00178042 g/l FeSO4 x 7 H2O 0.00098912 g/l CaCl2 x 2 H2O 0.00098912 g/l NiCl2 x 6 H2O 0.000296736 g/l Na2WO4 x 2 H2O 0.00024728 g/l AlK(SO4)2 x 12 H2O 0.000197824 g/l CuSO4 x 5 H2O 9.8912e-05 g/l H3BO3 9.8912e-05 g/l Na2MoO4 x 2 H2O 9.8912e-05 g/l Pyridoxine hydrochloride 9.8912e-05 g/l p-Aminobenzoic acid 4.9456e-05 g/l (DL)-alpha-Lipoic acid 4.9456e-05 g/l Calcium D-(+)-pantothenate 4.9456e-05 g/l Nicotinic acid 4.9456e-05 g/l Riboflavin 4.9456e-05 g/l Thiamine HCl 4.9456e-05 g/l Folic acid 1.97824e-05 g/l Biotin 1.97824e-05 g/l Na2SeO3 x 5 H2O 2.96736e-06 g/l Vitamin B12 9.8912e-07 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 3051 | positive | growth | 30 |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 3051 | mud | Potomac River | USA | USA | North America |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 99.15 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 88.43 | no |
| 125439 | motility | BacteriaNetⓘ | no | 64.33 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.21 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 94.44 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 75.77 | yes |
| 125438 | aerobic | aerobicⓘ | no | 86.85 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 83.33 | no |
| 125438 | thermophilic | thermophileⓘ | no | 88.49 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 66.71 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Electrical current disrupts the electron transfer in defined consortia. | Yee MO, Ottosen LDM, Rotaru AE. | Microb Biotechnol | 10.1111/1751-7915.14373 | 2024 | ||
| The Role of Exopolysaccharides in Direct Interspecies Electron Transfer. | Zhuang Z, Xia X, Yang G, Zhuang L. | Front Microbiol | 10.3389/fmicb.2022.927246 | 2022 | ||
| Targeted rRNA depletion enables efficient mRNA sequencing in diverse bacterial species and complex co-cultures. | Heom KA, Wangsanuwat C, Butkovich LV, Tam SC, Rowe AR, O'Malley MA, Dey SS. | mSystems | 10.1128/msystems.00281-23 | 2023 | ||
| Adaptation of Carbon Source Utilization Patterns of Geobacter metallireducens During Sessile Growth. | Marozava S, Merl-Pham J, Muller H, Meckenstock RU. | Front Microbiol | 10.3389/fmicb.2020.01271 | 2020 | ||
| Metabolism | Extracellular electron uptake in Methanosarcinales is independent of multiheme c-type cytochromes. | Yee MO, Rotaru AE. | Sci Rep | 10.1038/s41598-019-57206-z | 2020 | |
| Geobacter-associated prophages confer beneficial effect on dissimilatory reduction of Fe(III) oxides. | Yang G, Lin A, Wu X, Lin C, Zhu S, Zhuang L. | Fundam Res | 10.1016/j.fmre.2022.10.013 | 2024 | ||
| Metabolism | Secondary Mineralization of Ferrihydrite Affects Microbial Methanogenesis in Geobacter-Methanosarcina Cocultures. | Tang J, Zhuang L, Ma J, Tang Z, Yu Z, Zhou S. | Appl Environ Microbiol | 10.1128/aem.01517-16 | 2016 | |
| Enzymology | Identification of genes specifically required for the anaerobic metabolism of benzene in Geobacter metallireducens. | Zhang T, Tremblay PL, Chaurasia AK, Smith JA, Bain TS, Lovley DR. | Front Microbiol | 10.3389/fmicb.2014.00245 | 2014 | |
| Metabolism | Anaerobic benzene oxidation via phenol in Geobacter metallireducens. | Zhang T, Tremblay PL, Chaurasia AK, Smith JA, Bain TS, Lovley DR. | Appl Environ Microbiol | 10.1128/aem.03134-13 | 2013 | |
| Metabolism | Structural and Functional Characterization of an Electron Transfer Flavoprotein Involved in Toluene Degradation in Strictly Anaerobic Bacteria. | Vogt MS, Schuhle K, Kolzer S, Peschke P, Chowdhury NP, Kleinsorge D, Buckel W, Essen LO, Heider J. | J Bacteriol | 10.1128/jb.00326-19 | 2019 | |
| Microbial Methylation of Iodide in Unconfined Aquifer Sediments at the Hanford Site, USA. | Bagwell CE, Zhong L, Wells JR, Mitroshkov AV, Qafoku NP. | Front Microbiol | 10.3389/fmicb.2019.02460 | 2019 | ||
| Metabolism | Anaerobic benzene oxidation by Geobacter species. | Zhang T, Bain TS, Nevin KP, Barlett MA, Lovley DR. | Appl Environ Microbiol | 10.1128/aem.02469-12 | 2012 | |
| Metabolism | Outer cell surface components essential for Fe(III) oxide reduction by Geobacter metallireducens. | Smith JA, Lovley DR, Tremblay PL. | Appl Environ Microbiol | 10.1128/aem.02954-12 | 2013 | |
| Monitoring Microbial Mineralization Using Reverse Stable Isotope Labeling Analysis by Mid-Infrared Laser Spectroscopy. | Dong X, Jochmann MA, Elsner M, Meyer AH, Backer LE, Rahmatullah M, Schunk D, Lens G, Meckenstock RU. | Environ Sci Technol | 10.1021/acs.est.7b02909 | 2017 | ||
| Phylogeny | Evidence for benzylsuccinate synthase subtypes obtained by using stable isotope tools. | Kummel S, Kuntze K, Vogt C, Boll M, Heider J, Richnow HH. | J Bacteriol | 10.1128/jb.00477-13 | 2013 | |
| Metabolism | Stable hydrogen and carbon isotope fractionation during microbial toluene degradation: mechanistic and environmental aspects. | Morasch B, Richnow HH, Schink B, Meckenstock RU. | Appl Environ Microbiol | 10.1128/aem.67.10.4842-4849.2001 | 2001 | |
| Aromatizing cyclohexa-1,5-diene-1-carbonyl-coenzyme A oxidase. Characterization and its role in anaerobic aromatic metabolism. | Thiele B, Rieder O, Jehmlich N, von Bergen M, Muller M, Boll M. | J Biol Chem | 10.1074/jbc.m802841200 | 2008 | ||
| Crucial roles of intracellular cyclic di-GMP in impacting the genes important for extracellular electron transfer by Geobacter metallireducens. | Jiang Y, Sun L, Hou L, Hu Y, Jiang Z, Dong Y, Song H, Shi L. | Appl Environ Microbiol | 10.1128/aem.00727-25 | 2025 | ||
| Enhancement of direct interspecies electron transfer and methane production by co-culture of dual Methanosarcina species and Geobacter metallireducens. | Liu L, Li P, Dong H, Liu C, Li H, Ma Z, Li R, Dang Y. | Front Microbiol | 10.3389/fmicb.2025.1604265 | 2025 | ||
| The robustness of porin-cytochrome gene clusters from Geobacter metallireducens in extracellular electron transfer. | Zhuo S, Jiang Y, Qi L, Hu Y, Jiang Z, Dong Y, Shi L. | mBio | 10.1128/mbio.00580-24 | 2024 | ||
| Enzymology | Fe(III)-dependent Nrf activity determines nitrate reduction partitioning in nitrate-reducing communities. | Zhan J, Zhang L, Lai S, Guo J, Lin T, Liu G, Rensing C, Liu X, Zhou S. | mBio | 10.1128/mbio.02220-25 | 2025 | |
| Electrobiocorrosion by microbes without outer-surface cytochromes. | Holmes DE, Woodard TL, Smith JA, Musat F, Lovley DR. | mLife | 10.1002/mlf2.12111 | 2024 | ||
| Expanded Diversity of Microbial Groups Capable of Anaerobic Pyrite Reduction and Assimilation of Dissolution Products. | Boyd ES, Payne D. | Environ Microbiol | 10.1111/1462-2920.70125 | 2025 | ||
| Methane production by Methanothrix thermoacetophila via direct interspecies electron transfer with Geobacter metallireducens. | Zhou J, Smith JA, Li M, Holmes DE. | mBio | 10.1128/mbio.00360-23 | 2023 | ||
| Detrimental impact of the Geobacter metallireducens type VI secretion system on direct interspecies electron transfer. | Smith JA, Holmes DE, Woodard TL, Li Y, Liu X, Wang LY, Meier D, Schwarz IA, Lovley DR. | Microbiol Spectr | 10.1128/spectrum.00941-23 | 2023 | ||
| Different outer membrane c-type cytochromes are involved in direct interspecies electron transfer to Geobacter or Methanosarcina species. | Holmes DE, Zhou J, Smith JA, Wang C, Liu X, Lovley DR. | mLife | 10.1002/mlf2.12037 | 2022 | ||
| Metabolism | Mechanisms for Electron Uptake by Methanosarcina acetivorans during Direct Interspecies Electron Transfer. | Holmes DE, Zhou J, Ueki T, Woodard T, Lovley DR. | mBio | 10.1128/mbio.02344-21 | 2021 | |
| Metabolism | Necessity of electrically conductive pili for methanogenesis with magnetite stimulation. | Wang O, Zheng S, Wang B, Wang W, Liu F. | PeerJ | 10.7717/peerj.4541 | 2018 | |
| Biological Recovery of Platinum Complexes from Diluted Aqueous Streams by Axenic Cultures. | Maes S, Props R, Fitts JP, De Smet R, Vanhaecke F, Boon N, Hennebel T. | PLoS One | 10.1371/journal.pone.0169093 | 2017 | ||
| Metabolism | Direct interspecies electron transfer between Geobacter metallireducens and Methanosarcina barkeri. | Rotaru AE, Shrestha PM, Liu F, Markovaite B, Chen S, Nevin KP, Lovley DR. | Appl Environ Microbiol | 10.1128/aem.00895-14 | 2014 | |
| Syntrophic growth with direct interspecies electron transfer between pili-free Geobacter species. | Liu X, Zhuo S, Rensing C, Zhou S. | ISME J | 10.1038/s41396-018-0193-y | 2018 | ||
| Correlation of Key Physiological Properties of Methanosarcina Isolates with Environment of Origin. | Zhou J, Holmes DE, Tang HY, Lovley DR. | Appl Environ Microbiol | 10.1128/aem.00731-21 | 2021 | ||
| Metabolism | Promoting interspecies electron transfer with biochar. | Chen S, Rotaru AE, Shrestha PM, Malvankar NS, Liu F, Fan W, Nevin KP, Lovley DR. | Sci Rep | 10.1038/srep05019 | 2014 | |
| Characterization of the genome from Geobacter anodireducens, a strain with enhanced current production in bioelectrochemical systems. | Sun D, Wan X, Liu W, Xia X, Huang F, Wang A, Smith JA, Dang Y, Holmes DE. | RSC Adv | 10.1039/c9ra02343g | 2019 | ||
| The Catabolic System of Acetovanillone and Acetosyringone in Sphingobium sp. Strain SYK-6 Useful for Upgrading Aromatic Compounds Obtained through Chemical Lignin Depolymerization. | Higuchi Y, Kamimura N, Takenami H, Kikuiri Y, Yasuta C, Tanatani K, Shobuda T, Otsuka Y, Nakamura M, Sonoki T, Masai E. | Appl Environ Microbiol | 10.1128/aem.00724-22 | 2022 | ||
| Metabolism | Vanadium respiration by Geobacter metallireducens: novel strategy for in situ removal of vanadium from groundwater. | Ortiz-Bernad I, Anderson RT, Vrionis HA, Lovley DR. | Appl Environ Microbiol | 10.1128/aem.70.5.3091-3095.2004 | 2004 | |
| Metabolism | Microbially mediated biodegradation of hexahydro-1,3,5-trinitro-1,3,5- triazine by extracellular electron shuttling compounds. | Kwon MJ, Finneran KT. | Appl Environ Microbiol | 10.1128/aem.00660-06 | 2006 | |
| Metabolism | Reductive precipitation of gold by dissimilatory Fe(III)-reducing bacteria and archaea. | Kashefi K, Tor JM, Nevin KP, Lovley DR. | Appl Environ Microbiol | 10.1128/aem.67.7.3275-3279.2001 | 2001 | |
| Metabolism | Hydrogen production by geobacter species and a mixed consortium in a microbial electrolysis cell. | Call DF, Wagner RC, Logan BE. | Appl Environ Microbiol | 10.1128/aem.01760-09 | 2009 | |
| Enzymology | Characterization of citrate synthase from Geobacter sulfurreducens and evidence for a family of citrate synthases similar to those of eukaryotes throughout the Geobacteraceae. | Bond DR, Mester T, Nesbo CL, Izquierdo-Lopez AV, Collart FL, Lovley DR. | Appl Environ Microbiol | 10.1128/aem.71.7.3858-3865.2005 | 2005 | |
| Metabolism | Design of a Microbial Remediation Inoculation Program for Petroleum Hydrocarbon Contaminated Sites Based on Degradation Pathways. | Li X, He W, Du M, Zheng J, Du X, Li Y | Int J Environ Res Public Health | 10.3390/ijerph18168794 | 2021 | |
| Metabolism | Combined Biotic-Abiotic 2,4-Dinitroanisole Degradation in the Presence of Hexahydro-1,3,5-trinitro-1,3,5-triazine. | Niedzwiecka JB, McGee K, Finneran KT | Environ Sci Technol | 10.1021/acs.est.0c02363 | 2020 | |
| Metabolism | Mercury methylation by Geobacter metallireducens GS-15 in the presence of Skeletonema costatum. | Ding LY, Zhang YY, Zhang LJ, Fang F, He NN, Liang P, Wu SC, Wong MH, Tao HC | Sci Total Environ | 10.1016/j.scitotenv.2019.03.222 | 2019 | |
| Enzymology | Isolation and characterization of a heterologously expressed bacterial laccase from the anaerobe Geobacter metallireducens. | Berini F, Verce M, Ausec L, Rosini E, Tonin F, Pollegioni L, Mandic-Mulec I | Appl Microbiol Biotechnol | 10.1007/s00253-018-8785-z | 2018 | |
| Metabolism | Electron Transfer Strategies Regulate Carbonate Mineral and Micropore Formation. | Zeng Z, Tice MM | Astrobiology | 10.1089/ast.2016.1560 | 2017 | |
| Metabolism | Geobacter sp. SD-1 with enhanced electrochemical activity in high-salt concentration solutions. | Sun D, Call D, Wang A, Cheng S, Logan BE | Environ Microbiol Rep | 10.1111/1758-2229.12193 | 2014 | |
| Metabolism | Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens. | Feist AM, Nagarajan H, Rotaru AE, Tremblay PL, Zhang T, Nevin KP, Lovley DR, Zengler K | PLoS Comput Biol | 10.1371/journal.pcbi.1003575 | 2014 | |
| Fe(III) reduction-mediated phosphate removal as vivianite (Fe3(PO4)28H2O) in septic system wastewater. | Azam HM, Finneran KT | Chemosphere | 10.1016/j.chemosphere.2013.09.032 | 2013 | ||
| Enzymology | Structure determination and biochemical characterization of a putative HNH endonuclease from Geobacter metallireducens GS-15. | Xu SY, Kuzin AP, Seetharaman J, Gutjahr A, Chan SH, Chen Y, Xiao R, Acton TB, Montelione GT, Tong L | PLoS One | 10.1371/journal.pone.0072114 | 2013 | |
| Metabolism | Electron shuttle-mediated biotransformation of hexahydro-1,3,5-trinitro-1,3,5-triazine adsorbed to granular activated carbon. | Millerick K, Drew SR, Finneran KT | Environ Sci Technol | 10.1021/es401641s | 2013 | |
| Metabolism | Arsenic dissolution from Japanese paddy soil by a dissimilatory arsenate-reducing bacterium Geobacter sp. OR-1. | Ohtsuka T, Yamaguchi N, Makino T, Sakurai K, Kimura K, Kudo K, Homma E, Dong DT, Amachi S | Environ Sci Technol | 10.1021/es400231x | 2013 | |
| Proteome | Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium. | Wohlbrand L, Jacob JH, Kube M, Mussmann M, Jarling R, Beck A, Amann R, Wilkes H, Reinhardt R, Rabus R | Environ Microbiol | 10.1111/j.1462-2920.2012.02885.x | 2012 | |
| Genetics | The methylomes of six bacteria. | Murray IA, Clark TA, Morgan RD, Boitano M, Anton BP, Luong K, Fomenkov A, Turner SW, Korlach J, Roberts RJ | Nucleic Acids Res | 10.1093/nar/gks891 | 2012 | |
| Metabolism | Identification of the Geobacter metallireducens bamVW two-component system, involved in transcriptional regulation of aromatic degradation. | Juarez JF, Zamarro MT, Barragan MJ, Blazquez B, Boll M, Kuntze K, Garcia JL, Diaz E, Carmona M | Appl Environ Microbiol | 10.1128/AEM.02255-09 | 2009 | |
| Enzymology | Identification of the electron transfer flavoprotein as an upregulated enzyme in the benzoate utilization of Desulfotignum balticum. | Habe H, Kobuna A, Hosoda A, Kosaka T, Endoh T, Tamura H, Yamane H, Nojiri H, Omori T, Watanabe K | Biosci Biotechnol Biochem | 10.1271/bbb.90160 | 2009 | |
| Metabolism | Phenol degradation in the strictly anaerobic iron-reducing bacterium Geobacter metallireducens GS-15. | Schleinitz KM, Schmeling S, Jehmlich N, von Bergen M, Harms H, Kleinsteuber S, Vogt C, Fuchs G | Appl Environ Microbiol | 10.1128/AEM.01525-08 | 2009 | |
| Metabolism | Plutonium(V/VI) Reduction by the Metal-Reducing Bacteria Geobacter metallireducens GS-15 and Shewanella oneidensis MR-1. | Icopini GA, Lack JG, Hersman LE, Neu MP, Boukhalfa H | Appl Environ Microbiol | 10.1128/AEM.00022-09 | 2009 | |
| Metabolism | Polar lipid fatty acids, LPS-hydroxy fatty acids, and respiratory quinones of three Geobacter strains, and variation with electron acceptor. | Hedrick DB, Peacock AD, Lovley DR, Woodard TL, Nevin KP, Long PE, White DC | J Ind Microbiol Biotechnol | 10.1007/s10295-008-0486-7 | 2008 | |
| Metabolism | Flux analysis of central metabolic pathways in Geobacter metallireducens during reduction of soluble Fe(III)-nitrilotriacetic acid. | Tang YJ, Chakraborty R, Martin HG, Chu J, Hazen TC, Keasling JD | Appl Environ Microbiol | 10.1128/AEM.02986-06 | 2007 | |
| Metabolism | Novel reduction of mercury (II) by mercury-sensitive dissimilatory metal reducing bacteria. | Wiatrowski HA, Ward PM, Barkay T | Environ Sci Technol | 10.1021/es061046g | 2006 | |
| Metabolism | Sustained and complete hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) degradation in zero-valent iron simulated barriers under different microbial conditions. | Shrout JD, Larese-Casanova P, Scherer MM, Alvarez PJ | Environ Technol | 10.1080/09593332608618474 | 2005 | |
| Metabolism | Hexahydro-1,3,5-trinitro-1,3,5-triazine transformation by biologically reduced ferrihydrite: evolution of Fe mineralogy, surface area, and reaction rates. | Williams AG, Gregory KB, Parkin GF, Scherer MM | Environ Sci Technol | 10.1021/es0490525 | 2005 | |
| Metabolism | Formation of tabular single-domain magnetite induced by Geobacter metallireducens GS-15. | Vali H, Weiss B, Li YL, Sears SK, Kim SS, Kirschvink JL, Zhang CL | Proc Natl Acad Sci U S A | 10.1073/pnas.0404040101 | 2004 | |
| Metabolism | Reduction kinetics of Fe(III), Co(III), U(VI), Cr(VI), and Tc(VII) in cultures of dissimilatory metal-reducing bacteria. | Liu C, Gorby YA, Zachara JM, Fredrickson JK, Brown CF | Biotechnol Bioeng | 10.1002/bit.10430 | 2002 | |
| Phylogeny | Geobacter hydrogenophilus, Geobacter chapellei and Geobacter grbiciae, three new, strictly anaerobic, dissimilatory Fe(III)-reducers. | Coates JD, Bhupathiraju VK, Achenbach LA, Mclnerney MJ, Lovley DR | Int J Syst Evol Microbiol | 10.1099/00207713-51-2-581 | 2001 | |
| Metabolism | Degradation of Monochlorinated and Nonchlorinated Aromatic Compounds under Iron-Reducing Conditions. | Kazumi J, Haggblom MM, Young LY | Appl Environ Microbiol | 10.1128/aem.61.11.4069-4073.1995 | 1995 | |
| Abiotic reduction of 4-chloronitrobenzene to 4-chloroaniline in a dissimilatory iron-reducing enrichment culture. | Heijman CG, Holliger C, Glaus MA, Schwarzenbach RP, Zeyer J | Appl Environ Microbiol | 10.1128/aem.59.12.4350-4353.1993 | 1993 | ||
| Phylogeny | Geobacter benzoatilyticus sp. nov., a novel benzoate-oxidizing, iron-reducing bacterium isolated from petroleum contaminated soil. | Yang G, Li Y, Lin A, Zhuang L | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005281 | 2022 | |
| Phylogeny | Geobacter metallireducens gen. nov. sp. nov., a microorganism capable of coupling the complete oxidation of organic compounds to the reduction of iron and other metals. | Lovley DR, Giovannoni SJ, White DC, Champine JE, Phillips EJ, Gorby YA, Goodwin S | Arch Microbiol | 10.1007/BF00290916 | 1993 |
| #3051 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7210 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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