Name: Muriicola jejuensis EM44
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5740

Type strain:

Species: Muriicola jejuensis

Strain Designation: EM44

Culture col. no.: DSM 21206, KCTC 22299

Strain history: <- CO Jeon, Gyungsang Univ.

NCBI tax ID(s): 504488 (species)

SI-ID 404228

DSM 21206

Section

Muriicola jejuensis EM44 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from sea water from the eastern coast.

Gram-negative
motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Muriicola*
	Species	**Muriicola jejuensis**
	Full Scientific Name (LPSN)	Muriicola jejuensis Kahng et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #29537]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #29537]	Cell length	1.7-2.3 µm

[Ref.: #29537]	Cell width	0.4-0.6 µm

[Ref.: #29537]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #29537]	Motility	yes
[Ref.: #67771]	Motility	no

[Ref.: #29537]	Flagellum arrangement	gliding

[Ref.: #29537]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15579]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #15579]

Culture medium growth

[Ref.: #15579]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15579]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #15579]	growth	28 °C
[Ref.: #29537]	growth	15-35 °C
[Ref.: #29537]	optimum	25-30 °C
[Ref.: #67771]	growth	25-30 °C

[Ref.: #15579]	Temperature range	mesophilic
[Ref.: #29537]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29537]			optimum	7-8.5
[Ref.: #29537]			growth	6.5-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29537]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #29537]	Ability of spore formation	no
[Ref.: #67771]	Ability of spore formation	no

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29537]		NaCl		growth	01-05	%
[Ref.: #29537]		NaCl		optimum	02-04	%

[Ref.: #29537]	Observation	aggregates in chains
[Ref.: #67771]	Observation	quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29537]	acetate ChEBI	+	carbon source
[Ref.: #29537]	dextrin ChEBI	+	carbon source
[Ref.: #29537]	esculin ChEBI	+	hydrolysis
[Ref.: #29537]	fructose ChEBI	+	carbon source
[Ref.: #29537]	galactose ChEBI	+	carbon source
[Ref.: #29537]	glucose ChEBI	+	carbon source
[Ref.: #29537]	glutamate ChEBI	+	carbon source
[Ref.: #29537]	lactose ChEBI	+	carbon source
[Ref.: #29537]	leucine ChEBI	+	carbon source
[Ref.: #29537]	maltose ChEBI	+	carbon source
[Ref.: #29537]	melibiose ChEBI	+	carbon source
[Ref.: #29537]	nitrate ChEBI	+	reduction
[Ref.: #29537]	proline ChEBI	+	carbon source
[Ref.: #29537]	propionate ChEBI	+	carbon source
[Ref.: #29537]	raffinose ChEBI	+	carbon source
[Ref.: #29537]	succinate ChEBI	+	carbon source
[Ref.: #29537]	sucrose ChEBI	+	carbon source
[Ref.: #29537]	threonine ChEBI	+	carbon source
[Ref.: #29537]	xylitol ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #29537]	acid phosphatase	+	3.1.3.2
[Ref.: #29537]	alkaline phosphatase	+	3.1.3.1
[Ref.: #29537]	alpha-galactosidase	+	3.2.1.22
[Ref.: #29537]	catalase	+	1.11.1.6
[Ref.: #29537]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15579]	Sample type/isolated from	sea water from the eastern coast
[Ref.: #15579]	Geographic location (country and/or sea, region)	Jeju
[Ref.: #15579]	Country	Republic of Korea
[Ref.: #15579]	Country ISO 3 Code	KOR
[Ref.: #15579]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From seawater on the eastern coast in Jeju
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Coast

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15579]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15579]	Muriicola jejuensis strain EM44 16S ribosomal RNA gene, partial sequence	EU443206	1487	ENA	504488 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Muriicola jejuensis KCTC 22299	GCA_010671595	contig	GenBank	504488 tax ID	*
[Ref.: #66792]	Muriicola jejuensis strain KCTC 22299	504488.4	wgs	PATRIC	504488 tax ID	*
[Ref.: #66792]	Muriicola jejuensis DSM 21206	2724679820	draft	JGI IMG/M	504488 tax ID	*

[Ref.: #15579]	GC-content	47.9 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29537]	GC-content	47.9 mol%
[Ref.: #67771]	GC-content	48.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Muriicola jejuensis strain KCTC 22299 PATRIC: 504488.4
[Ref.: #69480]	gram-positive	no	98.089	no
[Ref.: #69480]	anaerobic	no	98.062	no
[Ref.: #69480]	halophile	no	82.893	no
[Ref.: #69480]	spore-forming	no	97.595	yes
[Ref.: #69480]	glucose-util	yes	85.178	no
[Ref.: #69480]	aerobic	yes	81.501	yes
[Ref.: #69480]	motile	no	94.171	yes
[Ref.: #69480]	thermophile	no	93.363	yes
[Ref.: #69480]	flagellated	no	97.478	yes
[Ref.: #69480]	glucose-ferment	no	86.982	no

Availability in culture collections External links

[Ref.: #15579]

Culture collection no.

DSM 21206, KCTC 22299

[Ref.: #75220]

SI-ID 404228

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Muriicola jejuensis gen. nov., sp. nov., isolated from seawater.	Kahng HY, Lee SS, Kim JM, Jung JY, Lee MY, Park W, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.015313-0	2009	*

References

#15579

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21206

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29537

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25934 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#75220

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404228.1 )

#25934

IJSEM 1644 2010 ( DOI 10.1099/ijs.0.015313-0 , PubMed 19717580 )

* These data were automatically processed and therefore are not curated

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Muriicola jejuensis strain KCTC 22299

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