Flagellimonas ruestringensis (DSM 13258, KCTC 12948, LMG 19739)

Name: Flagellimonas ruestringensis (DSM 13258, KCTC 12948, LMG 19739)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5619

Type strain

Strain Designation B1

Culture col. no. DSM 13258 KCTC 12948 LMG 19739 B1 CIP 107369 1 more

NCBI tax ID(s) 886377 111501

Special Collections DSMZ KCTC Literature strains CIP North Sea Microbiome

History <- L. Berthe-Corti <- U. Maschmann; B1 CIP <- 2002, L. Berthe-Corti, Carl von Ossietzky Univ., Oldenburg, Germany: strain B1

Links

Flagellimonas ruestringensis B1 is a facultative anaerobe, slightly halophilic, mesophilic prokaryote that forms circular colonies and was isolated from seawater sediment suspension containing hexadecane.

Gram-negative rod-shaped colony-forming facultative anaerobe slightly halophilic mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 13469

LMG 19739,DSM 13258,KCTC 62007,KCTC 12928,KCTC 12948,CIP 107369

@ref 20215

Last LPSN update 2026-02-09 11:19:00

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Flagellimonas

Species Flagellimonas ruestringensis

Full scientific name Flagellimonas ruestringensis (Bruns et al. 2001) Molinari Novoa et al. 2024

Synonyms (2)

Muricauda ruestringensis
Allomuricauda ruestringensis

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
43377	negative	1.1-2.7 µm	0.3-0.6 µm	rod-shaped
122302	negative			rod-shaped
125438					93.167
125438	negative				95.333
125439	negative				98.9

Colony morphology

@ref	Colony size	Colony color	Colony shape	Medium used
43377	0.5-1 mm	yellow	circular	Nutrient Agar

Pigmentation

@ref	Production	Name
43377		flexirubin type pigments
122302		flexirubin type pigments

Multimedia

@ref:	66793
multimedia content:	EM_DSM_13258_1.jpg
multimedia.multimedia content:	EM_DSM_13258_1.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
4983	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
4983	MODIFIED SEA WATER AGAR (DSMZ Medium 917)	Medium recipe at MediaDive	Name: MODIFIED SEA WATER AGAR (DSMZ Medium 917) Composition: NaCl 17.7 g/l Agar 15.0 g/l MgSO4 x 7 H2O 4.46 g/l MgCl2 x 6 H2O 3.4 g/l Peptone 2.5 g/l Hexadecane 2.0 g/l Yeast extract 1.5 g/l CaCl2 x 2 H2O 0.98 g/l KCl 0.48 g/l Distilled water
34934	MEDIUM 168 - for Cytophaga latercula and Flammeovirga aprica		Agar (15.000 g);Yeast extract (0.500 g);Sodium acetate (0.200 g);Tryptone (2.000 g);Beef extract (0.500 g);Synthetic sea solution - M0216 (1000.000 ml)
43377	Nutrient agar (NA)
122302	CIP Medium 168	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
4983	positive	growth	28	mesophilic
4983	positive	growth	30	mesophilic
34934	positive	growth	25	mesophilic
43377	positive	optimum	20-30
43377	positive	growth	8-40
122302	positive	growth	15-41
122302	negative	growth	5
122302	negative	growth	45

Culture pH

@ref	Ability	Type	PH
43377	positive	optimum	6.5-7.5
43377	positive	growth	6-8

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
43377	facultative anaerobe
125439	obligate aerobe	94.1

Spore formation

@ref	Spore formation	Confidence
125438		93.833
125439		93.1

Halophily

@ref	Halophily level	Salt	Growth	Tested relation	Concentration
43377	slightly halophilic	NaCl	positive	growth	0.5-9.0 %(w/v)
43377		NaCl	positive	optimum	3 %(w/v)
122302		NaCl		growth	0 %
122302		NaCl		growth	2 %
122302		NaCl		growth	4 %
122302		NaCl		growth	6 %
122302		NaCl		growth	8 %
122302		NaCl		growth	10 %

Observation

43377

Observationformation of appendages as a continuum of the outer membrane

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43377	30089 ChEBI	acetate	-	carbon source
43377	2509 ChEBI	agar	-	hydrolysis
43377	16449 ChEBI	alanine	+	carbon source
43377	29016 ChEBI	arginine	+	carbon source
43377	17057 ChEBI	cellobiose	+	carbon source
43377	62968 ChEBI	cellulose	-	hydrolysis
122302	4853 ChEBI	esculin	+	hydrolysis
43377	16236 ChEBI	ethanol	-	carbon source
43377	28757 ChEBI	fructose	+	carbon source
43377	5291 ChEBI	gelatin	-	hydrolysis
43377	17234 ChEBI	glucose	-	carbon source
43377	45296 ChEBI	hexadecane	-	carbon source
122302	606565 ChEBI	hippurate	+	hydrolysis
43377	17716 ChEBI	lactose	+	carbon source
122302	15792 ChEBI	malonate	-	assimilation
43377	29864 ChEBI	mannitol	-	carbon source
43377	37684 ChEBI	mannose	+	carbon source
43377	17632 ChEBI	nitrate	-	reduction
122302	17632 ChEBI	nitrate	-	reduction
122302	16301 ChEBI	nitrite	-	reduction
43377		peptone	+	growth
43377	15361 ChEBI	pyruvate	-	carbon source
43377	16634 ChEBI	raffinose	+	carbon source
43377	17822 ChEBI	serine	-	carbon source
43377	28017 ChEBI	starch	-	hydrolysis
43377	17992 ChEBI	sucrose	+	carbon source

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
122302	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
43377	16136 ChEBI	hydrogen sulfide
43377	35581 ChEBI	indole
122302	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
122302	15688 ChEBI	acetoin	-
122302	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
122302	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
122302	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
122302	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122302	caseinase	-	3.4.21.50
43377	catalase	-	1.11.1.6
122302	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
122302	DNase	+
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	+		from API zym
122302	gamma-glutamyltransferase	+	2.3.2.2
122302	gelatinase	-
122302	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
122302	lipase	-
68382	lipase (C 14)	-		from API zym
122302	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
122302	ornithine decarboxylase	-	4.1.1.17
122302	oxidase	-
122302	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
122302	tryptophan deaminase	-
122302	tween esterase	+
122302	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	adipate degradation	100	2 of 2
66794	reductive acetyl coenzyme A pathway	100	7 of 7
66794	methylglyoxal degradation	100	5 of 5
66794	gluconeogenesis	100	8 of 8
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	vitamin K metabolism	100	5 of 5
66794	palmitate biosynthesis	100	22 of 22
66794	CMP-KDO biosynthesis	100	4 of 4
66794	kanosamine biosynthesis II	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	sulfopterin metabolism	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	denitrification	100	2 of 2
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	Entner Doudoroff pathway	90	9 of 10
66794	lipid A biosynthesis	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	isoleucine metabolism	87.5	7 of 8
66794	heme metabolism	85.71	12 of 14
66794	leucine metabolism	84.62	11 of 13
66794	proline metabolism	81.82	9 of 11
66794	pentose phosphate pathway	81.82	9 of 11
66794	threonine metabolism	80	8 of 10
66794	cellulose degradation	80	4 of 5
66794	starch degradation	80	8 of 10
66794	peptidoglycan biosynthesis	80	12 of 15
66794	glycogen metabolism	80	4 of 5
66794	glutamate and glutamine metabolism	78.57	22 of 28
66794	serine metabolism	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	valine metabolism	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	purine metabolism	77.66	73 of 94
66794	phenylalanine metabolism	76.92	10 of 13
66794	ketogluconate metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	lactate fermentation	75	3 of 4
66794	tryptophan metabolism	73.68	28 of 38
66794	vitamin B6 metabolism	72.73	8 of 11
66794	histidine metabolism	72.41	21 of 29
66794	photosynthesis	71.43	10 of 14
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	propionate fermentation	70	7 of 10
66794	vitamin B1 metabolism	69.23	9 of 13
66794	alanine metabolism	68.97	20 of 29
66794	pyrimidine metabolism	68.89	31 of 45
66794	enterobactin biosynthesis	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	arginine metabolism	66.67	16 of 24
66794	d-mannose degradation	66.67	6 of 9
66794	formaldehyde oxidation	66.67	2 of 3
66794	non-pathway related	65.79	25 of 38
66794	glycolysis	64.71	11 of 17
66794	tyrosine metabolism	64.29	9 of 14
66794	d-xylose degradation	63.64	7 of 11
66794	methionine metabolism	61.54	16 of 26
66794	urea cycle	61.54	8 of 13
66794	arachidonate biosynthesis	60	3 of 5
66794	flavin biosynthesis	60	9 of 15
66794	glycine betaine biosynthesis	60	3 of 5
66794	myo-inositol biosynthesis	60	6 of 10
66794	lysine metabolism	59.52	25 of 42
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	lipid metabolism	58.06	18 of 31
66794	propanol degradation	57.14	4 of 7
66794	citric acid cycle	57.14	8 of 14
66794	cysteine metabolism	55.56	10 of 18
66794	nitrate assimilation	55.56	5 of 9
66794	sulfate reduction	53.85	7 of 13
66794	isoprenoid biosynthesis	53.85	14 of 26
66794	pantothenate biosynthesis	50	3 of 6
66794	degradation of pentoses	50	14 of 28
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	glutathione metabolism	50	7 of 14
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	4-hydroxyphenylacetate degradation	50	5 of 10
66794	ethanol fermentation	50	1 of 2
66794	butanoate fermentation	50	2 of 4
66794	biotin biosynthesis	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	cyclohexanol degradation	50	2 of 4
66794	metabolism of disaccharids	45.45	5 of 11
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	mevalonate metabolism	42.86	3 of 7
66794	oxidative phosphorylation	41.76	38 of 91
66794	carotenoid biosynthesis	40.91	9 of 22
66794	O-antigen biosynthesis	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	D-cycloserine biosynthesis	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	lipoate biosynthesis	40	2 of 5
66794	degradation of hexoses	38.89	7 of 18
66794	degradation of sugar acids	36	9 of 25
66794	cyanate degradation	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	IAA biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	coenzyme M biosynthesis	30	3 of 10
66794	arachidonic acid metabolism	27.78	5 of 18
66794	cholesterol biosynthesis	27.27	3 of 11
66794	ascorbate metabolism	27.27	6 of 22
66794	3-phenylpropionate degradation	26.67	4 of 15
66794	polyamine pathway	26.09	6 of 23
66794	degradation of sugar alcohols	25	4 of 16
66794	vitamin E metabolism	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	phenylpropanoid biosynthesis	23.08	3 of 13
66794	allantoin degradation	22.22	2 of 9
66794	4-hydroxymandelate degradation	22.22	2 of 9

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122302	-	+	-	+	-	+	+	-	-	-	+	+	-	-	-	+	+	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122302	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
4983	seawater sediment suspension containing hexadecane	Jadebusen Bay	Germany	DEU	Europe
43377	continuous flow culture with sediment	Jadebusen bay	Germany	DEU	Europe
122302	Environment, Suspension of intertidal sediment		Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence AF218782 (>99% sequence identity) for Muricauda ruestringensis from Microbeatlas

Aquatic Samples	313
Soil Samples	24
Animal Samples	11
Plant Samples	3
Total Samples	351

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4983	1	Risk group (German classification) According to TRBA 466
122302	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM22408v1 assembly for Allomuricauda ruestringensis DSM 13258	complete	GCA_000224085	886377.3	2505679007	886377	99.5

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
4983	Muricauda ruestringensis 16S ribosomal RNA gene, partial sequence	AF218782	1426	886377
124043	Muricauda ruestringensis DSM 13258 partial 16S rRNA gene, isolate IK_P15	LR218076	1430	886377
124043	Muricauda ruestringensis DSM 13258 16S ribosomal RNA gene, partial sequence.	MW198082	601	886377
124043	Muricauda ruestringensis DSM 13258 16S ribosomal RNA gene, partial sequence.	MN905360	634	886377
124043	Muricauda ruestringensis DSM 13258 16S ribosomal RNA gene, partial sequence.	MW111253	649	886377

GC content

@ref	GC-content (mol%)	Method
4983	41.4	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Allomuricauda ruestringensis DSM 13258
NCBI: GCA_000224085

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	93.10	no
125439	motility	BacteriaNetⓘ	no	75.50	no
125439	gram_stain	BacteriaNetⓘ	negative	98.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Muricauda ruestringensis DSM 13258 DSM 13258
NCBI: GCA_000224085.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.33	yes
125438	anaerobic	anaerobicⓘ	no	97.88	yes
125438	aerobic	aerobicⓘ	yes	80.25	yes
125438	spore-forming	spore-formingⓘ	no	93.83	no
125438	thermophilic	thermophileⓘ	no	99.39	yes
125438	flagellated	motile2+ⓘ	no	93.17	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
	The effect of sonicated cell-free supernatant from Lacticaseibacillus paracasei B1 and Lactiplantibacillusplantarum O24 on selected quality determinants of cooked pork sausages.	Keska P, Stadnik J, Karbowiak M, Zielinska D.	Meat Sci	10.1016/j.meatsci.2025.109951	2025
	The potential of cell-free supernatants from Lacticaseibacillus paracasei B1 and Lactiplantibacillus plantarum O24 as antioxidant and antimicrobial agents.	Keska P, Zielinska D, Karbowiak M, Kruk M, Lisiecka U, Stadnik J.	Food Chem	10.1016/j.foodchem.2025.145408	2025
	Draft genome sequences of Flagellimonas sp. MMG031 and Marinobacter sp. MMG032 isolated from the dinoflagellate Symbiodinium pilosum.	Farrell MV, Aljaber AM, Amoruso M, Chan WF, Dael JR, De Tomas ML, Delavega EG, Eslava JM, Holdbrook-Smith BJ, Lee P, Mai V, Michael LR, Moreno SV, Quevedo JF, Roberts AG, Villanueva J, Westin C, Zazueta DM, Shikuma NJ.	Microbiol Resour Announc	10.1128/mra.00913-24	2025
	Competitive exclusion approach using an E. coli live vaccine to protect broilers from colonization with ESBL-/ pAmpC- E. coli.	Vargas D, Merle R, Friese A, Roesler U, Robe C.	Sci Rep	10.1038/s41598-025-10279-5	2025
	Draft Genome Sequence of the Bacterial Endophyte Priestia megaterium B1, Isolated from Roots of Apple (Malus domestica).	Mahmoud FM, Kusari S, Kublik S, Benning S, Siani R, Zuhlke S, Radl V, Mahnkopp-Dirks F, Schloter M.	Microbiol Resour Announc	10.1128/mra.01172-22	2023
	Biofilm formation by lactobacilli and resistance to stress treatments	Olszewska MA, Nynca A, Bialobrzewski I.	International journal of food science and technology.	10.1111/ijfs.14219	2019
	Muricauda okinawensis sp. Nov. and Muricauda yonaguniensis sp. Nov., Two Marine Bacteria Isolated from the Sediment Core near Hydrothermal Fields of Southern Okinawa Trough.	Cao W, Deng X, Jiang M, Zeng Z, Chang F.	Microorganisms	10.3390/microorganisms11061580	2023
Genetics	Characterization and functionality of Ligilactobacillus agilis 1003 isolated from chicken cecum against Klebsiella pneumoniae.	Yin HC, Jiang DH, Yu TF, Jiang XJ, Liu D.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1432422	2024
	Draft Genome Sequence of Muricauda sp. Strain K001 Isolated from a Marine Cyanobacterial Culture.	Vizzotto CS, Lopes FAC, Green SJ, Steindorff AS, Walter JM, Thompson FL, Kruger RH.	Genome Announc	10.1128/genomea.00451-18	2018
Pathogenicity	Assessment of the bacterial viability of chlorine- and quaternary ammonium compounds-treated Lactobacillus cells via a multi-method approach.	Olszewska MA, Nynca A, Bialobrzewski I, Kocot AM, Laguna J.	J Appl Microbiol	10.1111/jam.14208	2019
	Novel Applications of Lactic Acid and Acetic Acid Bacteria Preparations in Shaping the Technological and Microbiological Quality of Ready-to-Cook Minced Pork.	Karbowiak M, Okon A, Laszkiewicz B, Szymanski P, Zielinska D.	Foods	10.3390/foods14111934	2025
	Prevention of Escherichia coli infection in broiler chickens with Lactobacillus plantarum B1.	Wang S, Peng Q, Jia HM, Zeng XF, Zhu JL, Hou CL, Liu XT, Yang FJ, Qiao SY.	Poult Sci	10.3382/ps/pex061	2017
	Effect of Lactobacillus paracasei LK01 on Growth Performance, Antioxidant Capacity, Immunity, Intestinal Health, and Serum Biochemical Indices in Broilers.	Liu W, Cheng H, Zhang H, Liu G, Yin X, Zhang C, Jiang R, Wang Z, Ding X.	Animals (Basel)	10.3390/ani14233474	2024
	Effects of Lactobacillus plantarum HW1 on Growth Performance, Intestinal Immune Response, Barrier Function, and Cecal Microflora of Broilers with Necrotic Enteritis.	Chen P, Lv H, Liu W, Wang Y, Zhang K, Che C, Zhao J, Liu H.	Animals (Basel)	10.3390/ani13243810	2023
Metabolism	Effects of dietary Lactobacillus plantarum B1 on growth performance, intestinal microbiota, and short chain fatty acid profiles in broiler chickens.	Peng Q, Zeng XF, Zhu JL, Wang S, Liu XT, Hou CL, Thacker PA, Qiao SY.	Poult Sci	10.3382/ps/pev435	2016
	Transient colonization by Priestia megaterium B1L5 alters the structure of the rhizosphere microbiome towards potential plant beneficial bacterial groups in apple plantlets	Mahmoud F, Edelmann H, Si Y, Endrejat L, Pritsch K, Gutjahr C, Ehrenreich A, Winkelmann T, Winkler J, Schnitzler J, Schloter M.	Environ Microbiome		2025
Genetics	Comparative genomic analysis of strain Priestia megaterium B1 reveals conserved potential for adaptation to endophytism and plant growth promotion.	Mahmoud FM, Pritsch K, Siani R, Benning S, Radl V, Kublik S, Bunk B, Sproer C, Schloter M.	Microbiol Spectr	10.1128/spectrum.00422-24	2024
	Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1(T)).	Huntemann M, Teshima H, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng JF, Tapia R, Goodwin LA, Pitluck S, Liolios K, Pagani I, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Pan C, Brambilla EM, Rohde M, Spring S, Goker M, Detter JC, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T.	Stand Genomic Sci	10.4056/sigs.2786069	2012
	Systematic review on microbiome-related nutritional interventions interfering with the colonization of foodborne pathogens in broiler gut to prevent contamination of poultry meat.	Mekonnen YT, Savini F, Indio V, Seguino A, Giacometti F, Serraino A, Candela M, De Cesare A.	Poult Sci	10.1016/j.psj.2024.103607	2024
Phylogeny	Real-time PCR assays for detection of Brucella spp. and the identification of genotype ST27 in bottlenose dolphins (Tursiops truncatus).	Wu Q, McFee WE, Goldstein T, Tiller RV, Schwacke L.	J Microbiol Methods	10.1016/j.mimet.2014.03.001	2014
	Draft Genome Sequence of the Type Strain Sphingopyxis witflariensis DSM 14551.	Kaminski MA, Furmanczyk EM, Dziembowski A, Sobczak A, Lipinski L.	Genome Announc	10.1128/genomea.00924-17	2017
	A high-efficiency PEG-Ca²⁺-mediated transient transformation system for broccoli protoplasts.	Yang D, Zhao Y, Liu Y, Han F, Li Z.	Front Plant Sci	10.3389/fpls.2022.1081321	2022
	Characterization of Bacteriophage cd2, a Siphophage Infecting Carnobacterium divergens and a Representative Species of a New Genus of Phage.	Britton AP, Visser KA, Ongenae VMA, Zhang P, Wassink H, Doerksen TA, Welke CA, Lynch KH, van Belkum MJ, Dennis JJ, Yang X, Claessen D, Briegel A, Martin-Visscher LA.	Microbiol Spectr	10.1128/spectrum.00973-23	2023
	Lactobacillus plantarum GX17 benefits growth performance and improves functions of intestinal barrier/intestinal flora among yellow-feathered broilers.	Yin Y, Liao Y, Li J, Pei Z, Wang L, Shi Y, Peng H, Tan Y, Li C, Bai H, Ma C, Gong Y, Wei T, Peng H.	Front Immunol	10.3389/fimmu.2023.1195382	2023
	The Prophylactic Protection of Salmonella Typhimurium Infection by Lentilactobacillus buchneri GX0328-6 in Mice.	Shi Y, Peng H, Liao Y, Li J, Yin Y, Peng H, Wang L, Tan Y, Li C, Bai H, Ma C, Tan W, Li X.	Probiotics Antimicrob Proteins	10.1007/s12602-023-10145-8	2024
	Pretreatment of bamboo residues with Coriolus versicolor for enzymatic hydrolysis	Zhang X, Xu C, Wang H.	Journal of bioscience and bioengineering.		2007
Enzymology	Prevalence, molecular detection and risk factors investigation for the occurrence of Toxoplasma gondii in slaughter pigs in North India.	Thakur R, Sharma R, Aulakh RS, Gill JPS, Singh BB.	BMC Vet Res	10.1186/s12917-019-2178-0	2019
Metabolism	Pretreatment of bamboo residues with Coriolus versicolor for enzymatic hydrolysis.	Zhang X, Xu C, Wang H.	J Biosci Bioeng	10.1263/jbb.104.149	2007
Metabolism	Decolorization of cotton pulp black liquor by pleurotus ostreatus in a bubble-column reactor.	Zhao LH, Zhou JT, Lv H, Zheng CL, Yang YS, Sun HJ, Zhang XH.	Bull Environ Contam Toxicol	10.1007/s00128-007-9313-5	2008
Biotechnology	Effect of microorganisms on degradation of fluopyram and tebuconazole in laboratory and field studies.	Podbielska M, Kus-Liskiewicz M, Jagusztyn B, Szpyrka E.	Environ Sci Pollut Res Int	10.1007/s11356-023-25669-3	2023
	Effects of diluent gases on sooting transition process in ethylene counterflow diffusion flames.	Su Z, Ying Y, Chen C, Zhao R, Zhao X, Liu D.	RSC Adv	10.1039/d2ra02409h	2022
	Effects of a probiotic on the growth performance, intestinal flora, and immune function of chicks infected with Salmonella pullorum.	Chen C, Li J, Zhang H, Xie Y, Xiong L, Liu H, Wang F.	Poult Sci	10.1016/j.psj.2020.07.017	2020
	Emerging Nonthermal Technologies for the Production of Postbiotics.	Thirumdas R, Mudgil P.	Compr Rev Food Sci Food Saf	10.1111/1541-4337.70335	2025
	Evaluation of Bacillus cereus and Bacillus pumilus metabolites for anthelmintic activity.	Kumar ML, Thippeswamy B, Kuppust IL, Naveenkumar KJ, Shivakumar CK.	Pharmacognosy Res	10.4103/0974-8490.147213	2015
Metabolism	Arabidopsis AtSPL14, a plant-specific SBP-domain transcription factor, participates in plant development and sensitivity to fumonisin B1.	Stone JM, Liang X, Nekl ER, Stiers JJ.	Plant J	10.1111/j.1365-313x.2005.02334.x	2005
	Avian Pathogenic Escherichia coli (APEC) in Broiler Breeders: An Overview.	Joseph J, Zhang L, Adhikari P, Evans JD, Ramachandran R.	Pathogens	10.3390/pathogens12111280	2023
	Effect of Probiotics on Oral Candidiasis: A Systematic Review and Meta-Analysis.	Mundula T, Ricci F, Barbetta B, Baccini M, Amedei A.	Nutrients	10.3390/nu11102449	2019
	Formation and Transfer of Multi-Species Biofilms Containing E. coli O103:H2 on Food Contact Surfaces to Beef.	Nan Y, Rodas-Gonzalez A, Stanford K, Nadon C, Yang X, McAllister T, Narvaez-Bravo C.	Front Microbiol	10.3389/fmicb.2022.863778	2022
	Domain organization of DNase from Thioalkalivibrio sp. provides insights into retention of activity in high salt environments.	Alzbutas G, Kaniusaite M, Grybauskas A, Lagunavicius A.	Front Microbiol	10.3389/fmicb.2015.00661	2015
	Osmoprotectants play a major role in the Portulaca oleracea resistance to high levels of salinity stress-insights from a metabolomics and proteomics integrated approach.	Rodrigues Neto JC, Salgado FF, Braga IO, Carvalho da Silva TL, Belo Silva VN, Leao AP, Ribeiro JAA, Abdelnur PV, Valadares LF, de Sousa CAF, Souza Junior MT.	Front Plant Sci	10.3389/fpls.2023.1187803	2023
Pathogenicity	Effects of Lactobacillus plantarum 15-1 and fructooligosaccharides on the response of broilers to pathogenic Escherichia coli O78 challenge.	Ding S, Wang Y, Yan W, Li A, Jiang H, Fang J.	PLoS One	10.1371/journal.pone.0212079	2019
	Effects of Paenibacillus xylanexedens on growth performance, intestinal histomorphology, intestinal microflora, and immune response in broiler chickens challenged with Escherichia coli K88.	Ekim B, Calik A, Ceylan A, Sacakli P.	Poult Sci	10.3382/ps/pez460	2020
Metabolism	Influence of Bacillus subtilis and Trichoderma harzianum on Penthiopyrad Degradation under Laboratory and Field Studies.	Podbielska M, Kus-Liskiewicz M, Jagusztyn B, Piechowicz B, Sadlo S, Slowik-Borowiec M, Twaruzek M, Szpyrka E.	Molecules	10.3390/molecules25061421	2020
	Ancestral archaea expanded the genetic code with pyrrolysine.	Guo LT, Amikura K, Jiang HK, Mukai T, Fu X, Wang YS, O'Donoghue P, Soll D, Tharp JM.	J Biol Chem	10.1016/j.jbc.2022.102521	2022
Pathogenicity	Inhibition of the growth of Bacillus subtilis DSM10 by a newly discovered antibacterial protein from the soil metagenome.	O'Mahony MM, Henneberger R, Selvin J, Kennedy J, Doohan F, Marchesi JR, Dobson AD.	Bioengineered	10.1080/21655979.2015.1018493	2015
	Culturable Bacterial Endophytes Associated With Shrubs Growing Along the Draw-Down Zone of Lake Bogoria, Kenya: Assessment of Antifungal Potential Against Fusarium solani and Induction of Bean Root Rot Protection.	Mutungi PM, Wekesa VW, Onguso J, Kanga E, Baleba SBS, Boga HI.	Front Plant Sci	10.3389/fpls.2021.796847	2021
	The Role of Neurotransmitters in the Protection of Caenorhabditis Elegans for Salmonella Infection by Lactobacillus.	Liu X, Jiang L, Li L, Yu H, Nie S, Xie M, Gong J.	Front Cell Infect Microbiol	10.3389/fcimb.2020.554052	2020
Metabolism	Degradation of protein and utilization of the hydrolytic products by a predominant ruminal bacterium, Prevotella ruminicola B1(4).	Griswold KE, Mackie RI.	J Dairy Sci	10.3168/jds.s0022-0302(97)75924-1	1997
	Cytostatic mechanism and antitumor potential of novel 1H-cyclopenta[b]benzofuran lignans isolated from Aglaia elliptica.	Lee SK, Cui B, Mehta RR, Kinghorn AD, Pezzuto JM.	Chem Biol Interact	10.1016/s0009-2797(98)00073-8	1998
Enzymology	Isolation of genes encoding beta-D-xylanase, beta-D-xylosidase and alpha-L-arabinofuranosidase activities from the rumen bacterium Prevotella ruminicola B1(4).	Gasparic A, Marinsek-Logar R, Martin J, Wallace RJ, Nekrep FV, Flint HJ.	FEMS Microbiol Lett	10.1111/j.1574-6968.1995.tb07349.x	1995
Genetics	Candidate-species delimitation in Desmognathus salamanders reveals gene flow across lineage boundaries, confounding phylogenetic estimation and clarifying hybrid zones.	Pyron RA, O'Connell KA, Lemmon EM, Lemmon AR, Beamer DA.	Ecol Evol	10.1002/ece3.8574	2022
Enzymology	The beta-glucanase ZgLamA from Zobellia galactanivorans evolved a bent active site adapted for efficient degradation of algal laminarin.	Labourel A, Jam M, Jeudy A, Hehemann JH, Czjzek M, Michel G.	J Biol Chem	10.1074/jbc.m113.538843	2014
Phylogeny	Microbial Communities Can Be Described by Metabolic Structure: A General Framework and Application to a Seasonally Variable, Depth-Stratified Microbial Community from the Coastal West Antarctic Peninsula.	Bowman JS, Ducklow HW.	PLoS One	10.1371/journal.pone.0135868	2015
Enzymology	Stabilization of the C-terminal part of pig and horse colipase by carboxypeptidase and trypsin inhibitors.	Chapus C, Desnuelle P, Foglizzo E.	Eur J Biochem	10.1111/j.1432-1033.1981.tb06203.x	1981
Metabolism	[Biosynthesis of thyroglobulin in the endostyle of larva (ammocoetes) of a fresh water lamprey, Lampetra planeri B1].	Monaco F, Andreoli M, La Posta A, Cataudella S, Roche J.	C R Seances Soc Biol Fil		1977
Enzymology	Characterization and in vitro properties of oral lactobacilli in breastfed infants.	Vestman NR, Timby N, Holgerson PL, Kressirer CA, Claesson R, Domellof M, Ohman C, Tanner AC, Hernell O, Johansson I.	BMC Microbiol	10.1186/1471-2180-13-193	2013
	Avian Pathogenic Escherichia coli (APEC): An Overview of Virulence and Pathogenesis Factors, Zoonotic Potential, and Control Strategies.	Kathayat D, Lokesh D, Ranjit S, Rajashekara G.	Pathogens	10.3390/pathogens10040467	2021
	Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines.	Vavourakis CD, Ghai R, Rodriguez-Valera F, Sorokin DY, Tringe SG, Hugenholtz P, Muyzer G.	Front Microbiol	10.3389/fmicb.2016.00211	2016
Metabolism	Glycogen biosynthesis via UDP-glucose in the ruminal bacterium Prevotella bryantii B1(4).	Lou J, Dawson KA, Strobel HJ.	Appl Environ Microbiol	10.1128/aem.63.11.4355-4359.1997	1997
Metabolism	Pyruvate fermentation by Oenococcus oeni and Leuconostoc mesenteroides and role of pyruvate dehydrogenase in anaerobic fermentation.	Wagner N, Tran QH, Richter H, Selzer PM, Unden G.	Appl Environ Microbiol	10.1128/aem.71.9.4966-4971.2005	2005
Metabolism	Role of secondary transporters and phosphotransferase systems in glucose transport by Oenococcus oeni.	Kim OB, Richter H, Zaunmuller T, Graf S, Unden G.	J Bacteriol	10.1128/jb.06038-11	2011
Enzymology	Two family B DNA polymerases from Aeropyrum pernix, an aerobic hyperthermophilic crenarchaeote.	Cann IK, Ishino S, Nomura N, Sako Y, Ishino Y.	J Bacteriol	10.1128/jb.181.19.5984-5992.1999	1999
	Evolution of the bipolar mating system of the mushroom Coprinellus disseminatus from its tetrapolar ancestors involves loss of mating-type-specific pheromone receptor function.	James TY, Srivilai P, Kues U, Vilgalys R.	Genetics	10.1534/genetics.105.051128	2006
	Muricauda abyssi sp. nov., a marine bacterium isolated from deep seawater of the Mariana Trench.	Wang D, Wu Y, Liu Y, Liu B, Gao Y, Yang Y, Zhang Y, Liu C, Huo Y, Tang A, Xu Y, Wei Y.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005615	2022
Phylogeny	Muricauda brasiliensis sp. nov., isolated from a mat-forming cyanobacterial culture.	Vizzotto CS, Peixoto J, Green SJ, Lopes FAC, Ramada MHS, Pires Junior OR, Pinto OHB, Totola MR, Thompson FL, Kruger RH.	Braz J Microbiol	10.1007/s42770-020-00400-3	2021
Phylogeny	Muricauda aurea sp. nov. and Muricauda profundi sp. nov., two marine bacteria isolated from deep sea sediment of Pacific Ocean.	Zhao S, Liu R, Lai Q, Shao Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.005217	2022
Phylogeny	Muricauda maritima sp. nov., Muricauda aequoris sp. nov. and Muricauda oceanensis sp. nov., three marine bacteria isolated from seawater.	Guo LL, Wu D, Sun C, Cheng H, Xu XW, Wu M, Wu YH	Int J Syst Evol Microbiol	10.1099/ijsem.0.004522	2020
Phylogeny	Muricauda alvinocaridis sp. nov., isolated from shrimp gill from the Okinawa Trough.	Liu L, Yu M, Zhou S, Fu T, Sun W, Wang L, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijsem.0.003953	2020
Phylogeny	Muricauda antarctica sp. nov., a marine member of the Flavobacteriaceae isolated from Antarctic seawater.	Wu YH, Yu PS, Zhou YD, Xu L, Wang CS, Wu M, Oren A, Xu XW	Int J Syst Evol Microbiol	10.1099/ijs.0.048355-0	2013
Phylogeny	Muricauda taeanensis sp. nov., isolated from a marine tidal flat.	Kim JM, Jin HM, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.047647-0	2013
Phylogeny	Muricauda flavescens sp. nov. and Muricauda aquimarina sp. nov., isolated from a salt lake near Hwajinpo Beach of the East Sea in Korea, and emended description of the genus Muricauda.	Yoon JH, Lee MH, Oh TK, Park YH	Int J Syst Evol Microbiol	10.1099/ijs.0.03051-0	2005
Phylogeny	Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment.	Bruns A, Rohde M, Berthe-Corti L	Int J Syst Evol Microbiol	10.1099/00207713-51-6-1997	2001

References

#4983	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13258
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#34934	; Curators of the CIP;
#43377	Alke Bruns, Manfred Rohde and Luise Berthe-Corti: Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment. IJSEM 51: 1997 - 2006 2001 ( DOI 10.1099/00207713-51-6-1997 , PubMed 11760940 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66793	Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122302	Collection of Institut Pasteur ; Curators of the CIP; CIP 107369
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Flagellimonas ruestringensis (DSM 13258, KCTC 12948, LMG 19739)

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