Name: Acetobacterium tundrae Z-4493
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5411

Type strain:

Species: Acetobacterium tundrae

Strain Designation: Z-4493

Culture col. no.: DSM 9173

Strain history: <- A. N. Nozhevnikova, Russian Academy of Sciences, Inst. of Microbiology, Moscow, Russia; Z-4493 <- O. R. Kotsyurbenko and M. V. Simankova; {1994}

NCBI tax ID(s): 132932 (species)

SI-ID 48589

DSM 9173

Special Collections

DSMZ

Section

Acetobacterium tundrae Z-4493 is an anaerobe, psychrophilic bacterium that was isolated from tundra wetland soil.

anaerobe
psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Eubacteriaceae*
	Genus	*Acetobacterium*
	Species	**Acetobacterium tundrae**
	Full Scientific Name (LPSN)	Acetobacterium tundrae Simankova et al. 2001

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3504]

Culture medium

ACETOBACTERIUM TUNDRAE MEDIUM (DSMZ Medium 900)

[Ref.: #3504]

Culture medium growth

[Ref.: #3504]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3504]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #3504]			growth	20 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #3504]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3504]	Sample type/isolated from	tundra wetland soil
[Ref.: #3504]	Geographic location (country and/or sea, region)	Polar Ural
[Ref.: #3504]	Country	Russia
[Ref.: #3504]	Country ISO 3 Code	RUS
[Ref.: #3504]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Environmental	#Terrestrial	#Tundra
#Environmental	#Terrestrial	#Wetland (Swamp)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ297449 (>99% sequence identity) for Acetobacterium paludosum from Microbeatlas

Aquatic Samples	49
Soil Samples	7
Animal Samples	7
Plant Samples
Total Samples	63

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3504]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #3504]	Acetobacterium aff. tundrae DSM 9173 partial 16S rRNA gene	AJ297449	1478	GenBank ENA	132932 tax ID

[Ref.: #3504]

GC-content

39.2 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #3504]

Culture collection no.

DSM 9173

[Ref.: #74900]

SI-ID 48589

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Acetobacterium tundrae sp nov, a new psychrophilic acetogenic bacterium from tundra soil.	Simankova MV, Kotsyurbenko OR, Stackebrandt E, Kostrikina NA, Lysenko AM, Osipov GA, Nozhevnikova AN	Arch Microbiol	10.1007/s002030000229	2000	*

References

#3504

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9173

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#74900

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48589.1 )

* These data were automatically processed and therefore are not curated

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