Name: Acetobacterium wieringae C
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5401

Type strain:

Species: Acetobacterium wieringae

Strain Designation: C

Culture col. no.: DSM 1911, ATCC 43740, JCM 2380

Strain history: <- M. Braun, strain C

NCBI tax ID(s): 52694 (species)

SI-ID 71

LMG 7579, ATCC 43740, DSM 1911, JCM 2380, AS 1.2033, CGMCC 1.2033

Section

Acetobacterium wieringae C is an anaerobe, mesophilic bacterium that was isolated from anaerobic sewage digester.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Eubacteriaceae*
	Genus	*Acetobacterium*
	Species	**Acetobacterium wieringae**
	Full Scientific Name (LPSN)	Acetobacterium wieringae Braun and Gottschalk 1983

Information on culture and growth conditions Culture and growth conditions

[Ref.: #924]

Culture medium

ACETOBACTERIUM MEDIUM (DSMZ Medium 135)

[Ref.: #924]

Culture medium growth

[Ref.: #924]

Culture medium link

Medium recipe at MediaDive

[Ref.: #924]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #924]			growth	30 °C

[Ref.: #924]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #924]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #924]	Sample type/isolated from	anaerobic sewage digester
[Ref.: #924]	Geographic location (country and/or sea, region)	Göttingen
[Ref.: #924]	Country	Germany
[Ref.: #924]	Country ISO 3 Code	DEU
[Ref.: #924]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Biodegradation	#Anaerobic digestor
#Engineered	#Waste	#Wastewater
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X96955 (>99% sequence identity) for Acetobacterium from Microbeatlas

Aquatic Samples	1132
Soil Samples	102
Animal Samples	647
Plant Samples	45
Total Samples	1926

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #924]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #924]	A.wieringae 16S rRNA gene	X96955	1474	ENA	52694 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acetobacterium wieringae DSM 1911	GCA_001766835	contig	GenBank	52694 tax ID	*
[Ref.: #66792]	Acetobacterium wieringae strain DSM 1911	52694.3	wgs	PATRIC	52694 tax ID	*
[Ref.: #66792]	Acetobacterium wieringae C	2690315663	draft	JGI IMG/M	52694 tax ID	*

[Ref.: #924]

GC-content

43.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acetobacterium wieringae strain DSM 1911 PATRIC: 52694.3
[Ref.: #69480]	gram-positive	yes	64.735	no
[Ref.: #69480]	anaerobic	yes	98.763	no
[Ref.: #69480]	halophile	no	89.501	no
[Ref.: #69480]	spore-forming	no	54.874	no
[Ref.: #69480]	glucose-util	yes	74.466	no
[Ref.: #69480]	thermophile	no	99.338	yes
[Ref.: #69480]	motile	yes	77.281	no
[Ref.: #69480]	aerobic	no	97.443	no
[Ref.: #69480]	flagellated	no	54.191	no
[Ref.: #69480]	glucose-ferment	yes	57.657	no

Availability in culture collections External links

[Ref.: #924]

Culture collection no.

DSM 1911, ATCC 43740, JCM 2380

[Ref.: #74891]

SI-ID 71

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Propionate Production from Carbon Monoxide by Synthetic Cocultures of Acetobacterium wieringae and Propionigenic Bacteria.	Moreira JPC, Diender M, Arantes AL, Boeren S, Stams AJM, Alves MM, Alves JI, Sousa DZ	Appl Environ Microbiol	10.1128/AEM.02839-20	2021	*
Phylogeny	Enrichment of Anaerobic Syngas-Converting Communities and Isolation of a Novel Carboxydotrophic Acetobacterium wieringae Strain JM.	Arantes AL, Moreira JPC, Diender M, Parshina SN, Stams AJM, Alves MM, Alves JI, Sousa DZ	Front Microbiol	10.3389/fmicb.2020.00058	2020	*
Genetics	Genome Sequence of the Acetogenic Bacterium Acetobacterium wieringae DSM 1911T.	Poehlein A, Bengelsdorf FR, Schiel-Bengelsdorf B, Daniel R, Durre P	Genome Announc	10.1128/genomeA.01430-16	2016	*

References

#924	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1911

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#74891

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID71.1 )

* These data were automatically processed and therefore are not curated

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Acetobacterium wieringae strain DSM 1911

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