Name: Enterococcus saccharolyticus HF 62
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5323

Type strain:

Species: Enterococcus saccharolyticus

Strain Designation: HF 62

Culture col. no.: DSM 20726, ATCC 43076, CCUG 27643, CCUG 33311, CIP 103246, JCM 8734, LMG 11427, NBRC 100493, NCDO 2594, NCIMB 702594, CCM 4377, CECT 4309, CGMCC 1.2485, HAMBI 1576, KACC 10783, KCTC 3643

Strain history: CIP <- 1988, NCFB <- 1982, Nat. Inst. Res. Dairying, Shinfield, UK: strain HF 62, Streptococcus saccharolyticus

NCBI tax ID(s): 1139996 (strain), 41997 (species)

SI-ID 2281

LMG 11427, ATCC 43076, NCFB 2594, NCDO 2594, JCM 8734, CCUG 27643, CIP 103246, CCUG 33311, NCIMB 702594, CCM 4377, CECT 4309, KCTC 3643, NBRC 100493, HAMBI 1576, KACC 10783, CNCTC 7229, CGMCC 1.2485, DSM 20726

Special Collections

Section

Enterococcus saccharolyticus HF 62 is a microaerophile, Gram-positive animal pathogen that was isolated from straw bedding.

Gram-positive
animal pathogen
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Enterococcaceae*
	Genus	*Enterococcus*
	Species	**Enterococcus saccharolyticus**
	Full Scientific Name (LPSN)	Enterococcus saccharolyticus (Farrow et al. 1985) Rodrigues and Collins 1991

Synonym

Streptococcus saccharolyticus

Information on morphological and physiological properties Morphology

[Ref.: #122335]	Gram stain	positive

[Ref.: #122335]	Cell shape	coccus-shaped

[Ref.: #122335]	Motility	no

[Ref.: #9036]	Type of hemolysis	gamma
[Ref.: #9036]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9036]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #9036]

Culture medium growth

[Ref.: #9036]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9036]

Culture medium composition

expand / minimize

[Ref.: #9036]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #9036]

Culture medium growth

[Ref.: #9036]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9036]

Culture medium composition

expand / minimize

[Ref.: #40583]

Culture medium

MEDIUM 29- Brain heart agar

[Ref.: #40583]

Culture medium growth

[Ref.: #40583]

Culture medium composition

expand / minimize

[Ref.: #122335]

Culture medium

CIP Medium 29

[Ref.: #122335]

Culture medium growth

[Ref.: #122335]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #9036]		growth	37 °C
[Ref.: #40583]		growth	37 °C
[Ref.: #67770]		growth	37 °C
[Ref.: #122335]		growth	25-45 °C
[Ref.: #122335]	no	growth	10 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #9036]	Oxygen tolerance	microaerophile
[Ref.: #122335]	Oxygen tolerance	facultative anaerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #122335]		NaCl		growth	6.5	%

[Ref.: #9036]	Murein short key	A11.31
[Ref.: #9036]	Murein types	A4alpha L-Lys-D-Asp

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	arginine ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68381]	D-mannitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-ribose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #122335]	esculin ChEBI	+	hydrolysis
[Ref.: #68381]	glycogen ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #122335]	hippurate ChEBI	+	hydrolysis
[Ref.: #68381]	hippurate ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68381]	L-arabinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	lactose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	maltose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	melezitose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	melibiose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #122335]	nitrate ChEBI	+	reduction
[Ref.: #122335]	nitrite ChEBI	-	reduction
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	raffinose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	sorbitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	sucrose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	trehalose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	urea ChEBI	-	hydrolysis	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68381]		acetoin ChEBI	yes	* from API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #122335]		acetoin ChEBI	-
[Ref.: #68381]		acetoin ChEBI	+	* from API rID32STR

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	-		* from API rID32STR
[Ref.: #122335]	alcohol dehydrogenase	+	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym, API rID32STR
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym, API rID32STR
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #122335]	amylase	-
[Ref.: #68381]	arginine dihydrolase	-	3.5.3.6	* from API rID32STR
[Ref.: #122335]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym, API rID32STR
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym, API rID32STR
[Ref.: #68381]	beta-mannosidase	-	3.2.1.25	* from API rID32STR
[Ref.: #9036]	catalase	-	1.11.1.6
[Ref.: #122335]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #9036]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #122335]	gelatinase	-
[Ref.: #68381]	glycyl tryptophan arylamidase	+		* from API rID32STR
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #122335]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #122335]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122335]	oxidase	-
[Ref.: #68381]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32STR
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #9036]	10517	-	+	-	-	+	-	-	+	+	+	+	+	+	-	+	+	+	-	-	-	-	+	-	-	-	+	+	+	+	-	-	-
[Ref.: #9036]	10516	-	+	-	-	+	-	-	+	+	+	+	+	+	-	-	+	+	-	-	-	+/-	+	-	-	-	+	+	+	+	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #122335]	7457	-	-	+	-	-	+	-	-	-	-	+	-	+	-	-	+	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	vitamin K metabolism	100	5 of 5
[Ref.: #66794]	aspartate and asparagine metabolism	100	9 of 9
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	pentose phosphate pathway	100	11 of 11
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	ribulose monophosphate pathway	100	2 of 2
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	teichoic acid biosynthesis	100	1 of 1
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	degradation of sugar alcohols	87.5	14 of 16
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	pyrimidine metabolism	84.44	38 of 45
[Ref.: #66794]	purine metabolism	81.91	77 of 94
[Ref.: #66794]	glycine betaine biosynthesis	80	4 of 5
[Ref.: #66794]	cellulose degradation	80	4 of 5
[Ref.: #66794]	starch degradation	80	8 of 10
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	photosynthesis	78.57	11 of 14
[Ref.: #66794]	serine metabolism	77.78	7 of 9
[Ref.: #66794]	phenylalanine metabolism	76.92	10 of 13
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	ketogluconate metabolism	75	6 of 8
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	Entner Doudoroff pathway	70	7 of 10
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	non-pathway related	65.79	25 of 38
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	glutamate and glutamine metabolism	64.29	18 of 28
[Ref.: #66794]	oxidative phosphorylation	63.74	58 of 91
[Ref.: #66794]	proline metabolism	63.64	7 of 11
[Ref.: #66794]	isoleucine metabolism	62.5	5 of 8
[Ref.: #66794]	alanine metabolism	62.07	18 of 29
[Ref.: #66794]	NAD metabolism	61.11	11 of 18
[Ref.: #66794]	methylglyoxal degradation	60	3 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	60	3 of 5
[Ref.: #66794]	arginine metabolism	58.33	14 of 24
[Ref.: #66794]	methionine metabolism	57.69	15 of 26
[Ref.: #66794]	ubiquinone biosynthesis	57.14	4 of 7
[Ref.: #66794]	propanol degradation	57.14	4 of 7
[Ref.: #66794]	polyamine pathway	56.52	13 of 23
[Ref.: #66794]	cysteine metabolism	55.56	10 of 18
[Ref.: #66794]	d-mannose degradation	55.56	5 of 9
[Ref.: #66794]	allantoin degradation	55.56	5 of 9
[Ref.: #66794]	histidine metabolism	55.17	16 of 29
[Ref.: #66794]	metabolism of disaccharids	54.55	6 of 11
[Ref.: #66794]	leucine metabolism	53.85	7 of 13
[Ref.: #66794]	isoprenoid biosynthesis	53.85	14 of 26
[Ref.: #66794]	lysine metabolism	52.38	22 of 42
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	adipate degradation	50	1 of 2
[Ref.: #66794]	CMP-KDO biosynthesis	50	2 of 4
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	50	4 of 8
[Ref.: #66794]	degradation of hexoses	50	9 of 18
[Ref.: #66794]	suberin monomers biosynthesis	50	1 of 2
[Ref.: #66794]	tetrahydrofolate metabolism	50	7 of 14
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	tryptophan metabolism	47.37	18 of 38
[Ref.: #66794]	phenylpropanoid biosynthesis	46.15	6 of 13
[Ref.: #66794]	urea cycle	46.15	6 of 13
[Ref.: #66794]	lipid metabolism	45.16	14 of 31
[Ref.: #66794]	CO2 fixation in Crenarchaeota	44.44	4 of 9
[Ref.: #66794]	reductive acetyl coenzyme A pathway	42.86	3 of 7
[Ref.: #66794]	citric acid cycle	42.86	6 of 14
[Ref.: #66794]	mevalonate metabolism	42.86	3 of 7
[Ref.: #66794]	glutathione metabolism	42.86	6 of 14
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	myo-inositol biosynthesis	40	4 of 10
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	degradation of pentoses	39.29	11 of 28
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	36.36	4 of 11
[Ref.: #66794]	d-xylose degradation	36.36	4 of 11
[Ref.: #66794]	vitamin B6 metabolism	36.36	4 of 11
[Ref.: #66794]	tyrosine metabolism	35.71	5 of 14
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	lipid A biosynthesis	33.33	3 of 9
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	flavin biosynthesis	33.33	5 of 15
[Ref.: #66794]	ascorbate metabolism	31.82	7 of 22
[Ref.: #66794]	coenzyme M biosynthesis	30	3 of 10
[Ref.: #66794]	propionate fermentation	30	3 of 10
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	29.41	5 of 17
[Ref.: #66794]	degradation of sugar acids	28	7 of 25
[Ref.: #66794]	arachidonic acid metabolism	27.78	5 of 18
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	androgen and estrogen metabolism	25	4 of 16
[Ref.: #66794]	dTDPLrhamnose biosynthesis	25	2 of 8
[Ref.: #66794]	sulfate reduction	23.08	3 of 13
[Ref.: #66794]	4-hydroxymandelate degradation	22.22	2 of 9
[Ref.: #66794]	heme metabolism	21.43	3 of 14
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9036]	Sample type/isolated from	straw bedding

[Ref.: #67770]	Sample type/isolated from	Straw bedding

[Ref.: #122335]	Sample type/isolated from	Other, Straw bedding
[Ref.: #122335]	Country	United Kingdom
[Ref.: #122335]	Country ISO 3 Code	GBR
[Ref.: #122335]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host

#Plants

#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence U30931 (>99% sequence identity) for Enterococcus from Microbeatlas

Aquatic Samples	1598
Soil Samples	573
Animal Samples	15794
Plant Samples	896
Total Samples	18861

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9036]	Pathogenicity (animal)	yes
[Ref.: #9036]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #122335]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9036]	Enterococcus saccharolyticus strain ATCC 43076 16S ribosomal RNA gene, partial sequence	DQ411816	1480	GenBank ENA	1139996 tax ID
[Ref.: #67770]	Enterococcus saccharolyticus gene for 16S ribosomal RNA, partial sequence, strain: JCM 8734	LC097072	1467	GenBank ENA	41997 tax ID
[Ref.: #20218]	Enterococcus saccharolyticus 16S rRNA gene, strain LMG 11427	AJ301839	1902	GenBank ENA	1139996 tax ID	*
[Ref.: #20218]	Enterococcus saccharolyticus gene for 16S rRNA, partial sequence, strain: NBRC 100493	AB681191	1483	GenBank ENA	1139996 tax ID	*
[Ref.: #20218]	Enterococcus saccharolyticus 16S ribosomal RNA partial sequence	U30931	1521	GenBank ENA	41997 tax ID	*
[Ref.: #20218]	S.saccharolyticus 16S rRNA gene (5')	X55766	144	GenBank ENA	1139996 tax ID	*
[Ref.: #20218]	S.saccharolyticus 16S rRNA gene	X55767	1293	GenBank ENA	1139996 tax ID	*
[Ref.: #20218]	Enterococcus saccharolyticus 16S rRNA gene	Y18357	1456	GenBank ENA	1139996 tax ID	*
[Ref.: #20218]	Enterococcus saccharolyticus 16S ribosomal RNA gene, partial sequence	AF061004	1506	GenBank ENA	1139996 tax ID	*
[Ref.: #20218]	E.saccharolyticus 16S rRNA gene, partial (strain ATTC 43076 (CCUG 33311))	Y12919	366	GenBank ENA	1139996 tax ID	*
[Ref.: #20218]	Enterococcus saccharolyticus strain CCUG 33311 clone 1 16S-23S ribosomal RNA intergenic spacer, partial sequence	DQ204538	228	GenBank ENA	1139996 tax ID	*
[Ref.: #20218]	Enterococcus saccharolyticus strain KCTC 3643 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	HM241937	440	GenBank ENA	1139996 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Enterococcus saccharolyticus DSM 20726	GCA_001886235	scaffold	GenBank ENA	41997 tax ID
[Ref.: #67770]	Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076	GCA_000407005	scaffold	GenBank ENA	1139996 tax ID
[Ref.: #67770]	Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076	GCA_000407285	scaffold	GenBank ENA	1139996 tax ID
[Ref.: #66792]	Enterococcus saccharolyticus ATCC 43076 [PRJNA206365]	1139996.4	wgs	PATRIC	1139996 tax ID	*
[Ref.: #66792]	Enterococcus saccharolyticus strain DSM 20726	41997.3	wgs	PATRIC	41997 tax ID	*
[Ref.: #66792]	Enterococcus saccharolyticus ATCC 43076	2545824663	draft	JGI IMG/M	1139996 tax ID	*

[Ref.: #9036]

GC-content

37.6 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 ATCC 43076 NCBI: GCA_000407285.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	85	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Enterococcus saccharolyticus ATCC 43076 [PRJNA206268] PATRIC: 1139996.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	87.393	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	90.306	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	74.588	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	87.932	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.766	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	80.667	no

Availability in culture collections External links

[Ref.: #9036]

Culture collection no.

DSM 20726, ATCC 43076, CCUG 27643, CCUG 33311, CIP 103246, JCM 8734, LMG 11427, NBRC 100493, NCDO 2594, NCIMB 702594, CCM 4377, CECT 4309, CGMCC 1.2485, HAMBI 1576, KACC 10783, KCTC 3643

[Ref.: #74812]

SI-ID 2281

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Enterococcus olivae sp. nov., isolated from Spanish-style green-olive fermentations.	Lucena-Padros H, Gonzalez JM, Caballero-Guerrero B, Ruiz-Barba JL, Maldonado-Barragan A	Int J Syst Evol Microbiol	10.1099/ijs.0.062208-0	2014	*
Phylogeny	Enterococcus saccharolyticus subsp. taiwanensis subsp. nov., isolated from broccoli.	Chen YS, Lin YH, Pan SF, Ji SH, Chang YC, Yu CR, Liou MS, Wu HC, Otoguro M, Yanagida F, Liao CC, Chiu CM, Huang BQ	Int J Syst Evol Microbiol	10.1099/ijs.0.052761-0	2013	*

References

#9036

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20726

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40583 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68381

Automatically annotated from API rID32STR .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#74812

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID2281.1 )

#122335 Collection of Institut Pasteur ; Curators of the CIP; CIP 103246
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Enterococcus saccharolyticus subsp. saccharolyticus in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 ATCC 43076

Enterococcus saccharolyticus ATCC 43076 [PRJNA206268]

Change proposal

Change proposal