Name: Aureimonas altamirensis S21B
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 532

Type strain:

Species: Aureimonas altamirensis

Strain Designation: S21B

Culture col. no.: DSM 21988, CECT 7138, CIP 109525, KCTC 22106, LMG 23375

Strain history: <- CECT <- C. Saiz Jimenez

NCBI tax ID(s): 1121026 (strain), 370622 (species)

SI-ID 289502

LMG 23375, CECT 7138, CIP 109525, KCTC 22106, DSM 21988

Other strains from Aureimonas altamirensis

A. altamirensis Dres_AurAlta_01, DSM 100027
A. altamirensis CCUG 32049
A. altamirensis CCUG 32050
A. altamirensis CCUG 32051
A. altamirensis CCUG 50235
A. altamirensis CCUG 59271
A. altamirensis CCUG 59610
A. altamirensis CCUG 59611

Section

Aureimonas altamirensis S21B is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from Altamira Cave.

colony-forming
Gram-negative
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Aurantimonadaceae*
	Genus	*Aureimonas*
	Species	**Aureimonas altamirensis**
	Full Scientific Name (LPSN)	Aureimonas altamirensis (Jurado et al. 2006) Rathsack et al. 2011

Synonym

Aurantimonas altamirensis

Information on morphological and physiological properties Morphology

[Ref.: #23134]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.919

[Ref.: #23134]	Cell length	0.4-1.2 µm

[Ref.: #23134]	Cell width	0.9 µm

[Ref.: #23134]	Cell shape	rod-shaped

[Ref.: #23134]	Motility	no

[Ref.: #23134]	Colony size	1.0 mm
[Ref.: #23134]	Colony color	yellow
[Ref.: #23134]	Colony shape	circular
[Ref.: #23134]	Cultivation medium used	TSA and in nutrient broth agar

[Ref.: #23134]	Pigment production	yes
[Ref.: #23134]	Pigmentation color	carotenoid pigments

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16081]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #16081]

Culture medium growth

[Ref.: #16081]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16081]

Culture medium composition

expand / minimize

[Ref.: #16081]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #16081]

Culture medium growth

[Ref.: #16081]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16081]

Culture medium composition

expand / minimize

[Ref.: #23134]

Culture medium

tryptose soy agar, marine agar 2216

[Ref.: #23134]

Culture medium growth

[Ref.: #23134]

Culture medium

TSA and in nutrient broth agar

[Ref.: #23134]

Culture medium growth

		Temperature
[Ref.: #16081]	growth	28 °C
[Ref.: #23134]	maximum	40 °C
[Ref.: #23134]	minimum	10 °C
[Ref.: #23134]	optimum	28 °C
[Ref.: #67771]	growth	28 °C

[Ref.: #16081]	Temperature range	mesophilic
[Ref.: #23134]	Temperature range	thermophilic
[Ref.: #23134]	Temperature range	psychrophilic
[Ref.: #23134]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23134]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #23134]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.995

[Ref.: #23134]

Halophily / tolerance level

halophilic

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #23134]		NaCl		optimum	0-20	g/L
[Ref.: #23134]		NaCl		growth	<50	g/L

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23357]	(-)-quinic acid ChEBI	+	carbon source
[Ref.: #23357]	2-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #23357]	2-oxobutanoate ChEBI	+	carbon source
[Ref.: #23357]	2-oxopentanoate ChEBI	+	carbon source
[Ref.: #23357]	3-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #23357]	4-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #23357]	acetate ChEBI	+	carbon source
[Ref.: #23134]	adenine ChEBI	+	hydrolysis
[Ref.: #23134]	adipate ChEBI	-	other
[Ref.: #23357]	alpha-cyclodextrin ChEBI	-	carbon source
[Ref.: #23357]	alpha-lactose ChEBI	+	carbon source
[Ref.: #23134]	arabinose ChEBI	+	other
[Ref.: #23357]	bromosuccinate ChEBI	+	carbon source
[Ref.: #23357]	cellobiose ChEBI	-	carbon source
[Ref.: #23134]	citrate ChEBI	-	other
[Ref.: #23357]	D-alanine ChEBI	+	carbon source
[Ref.: #23134]	D-arabinose ChEBI	+/-	builds acid from
[Ref.: #23357]	D-arabitol ChEBI	+	carbon source
[Ref.: #23357]	D-fructose ChEBI	+	carbon source
[Ref.: #23134]	D-fucose ChEBI	+/-	builds acid from
[Ref.: #23357]	D-galactonic acid lactone ChEBI	-	carbon source
[Ref.: #23357]	D-galactose ChEBI	+	carbon source
[Ref.: #23357]	D-glucarate ChEBI	+	carbon source
[Ref.: #23357]	D-gluconate ChEBI	+	carbon source
[Ref.: #23357]	D-glucosaminic acid ChEBI	+	carbon source
[Ref.: #23134]	D-glucose ChEBI	+	builds acid from
[Ref.: #23357]	D-mannitol ChEBI	+	carbon source
[Ref.: #23134]	D-mannose ChEBI	+	builds acid from
[Ref.: #23357]	D-mannose ChEBI	+	carbon source
[Ref.: #23134]	D-ribose ChEBI	+	builds acid from
[Ref.: #23357]	D-sorbitol ChEBI	+	carbon source
[Ref.: #23134]	D-xylose ChEBI	+	builds acid from
[Ref.: #23134]	decanoate ChEBI	-	other
[Ref.: #23357]	dextrin ChEBI	+/-	carbon source
[Ref.: #23357]	DL-carnitine ChEBI	+/-	carbon source
[Ref.: #23134]	erythritol ChEBI	+	builds acid from
[Ref.: #23357]	erythritol ChEBI	+	carbon source
[Ref.: #23134]	esculin ChEBI	-	hydrolysis
[Ref.: #23357]	formate ChEBI	+	carbon source
[Ref.: #23357]	gamma-aminobutyric acid ChEBI	+/-	carbon source
[Ref.: #23134]	gelatin ChEBI	-	hydrolysis
[Ref.: #23134]	gentiobiose ChEBI	-	builds acid from
[Ref.: #23357]	gentiobiose ChEBI	-	carbon source
[Ref.: #23134]	gluconate ChEBI	+	other
[Ref.: #23134]	glucose ChEBI	-	fermentation
[Ref.: #23357]	glucuronamide ChEBI	+/-	carbon source
[Ref.: #23357]	glycerol ChEBI	-	carbon source
[Ref.: #23357]	glycerol 3-phosphate ChEBI	+/-	carbon source
[Ref.: #23357]	glycogen ChEBI	+	carbon source
[Ref.: #23357]	glycyl L-aspartic acid ChEBI	+	carbon source
[Ref.: #23357]	glycyl-l-glutamate ChEBI	+	carbon source
[Ref.: #23357]	hydroxyproline ChEBI	+	carbon source
[Ref.: #23134]	hypoxanthine ChEBI	+	hydrolysis
[Ref.: #23357]	itaconate ChEBI	+	carbon source
[Ref.: #23357]	L-alaninamide ChEBI	+	carbon source
[Ref.: #23357]	L-alanine ChEBI	+	carbon source
[Ref.: #23357]	L-alanylglycine ChEBI	+	carbon source
[Ref.: #23134]	L-arabinose ChEBI	+	builds acid from
[Ref.: #23357]	L-arabinose ChEBI	+	carbon source
[Ref.: #23357]	L-asparagine ChEBI	+	carbon source
[Ref.: #23357]	L-aspartate ChEBI	+/-	carbon source
[Ref.: #23357]	L-fucose ChEBI	+	carbon source
[Ref.: #23357]	L-glutamate ChEBI	+	carbon source
[Ref.: #23357]	L-histidine ChEBI	+	carbon source
[Ref.: #23357]	L-leucine ChEBI	+	carbon source
[Ref.: #23357]	L-ornithine ChEBI	+	carbon source
[Ref.: #23357]	L-proline ChEBI	+	carbon source
[Ref.: #23357]	L-pyroglutamic acid ChEBI	+	carbon source
[Ref.: #23134]	L-rhamnose ChEBI	+	builds acid from
[Ref.: #23357]	L-rhamnose ChEBI	+	carbon source
[Ref.: #23357]	L-serine ChEBI	+	carbon source
[Ref.: #23357]	L-threonine ChEBI	+	carbon source
[Ref.: #23134]	L-xylose ChEBI	-	builds acid from
[Ref.: #23357]	lactate ChEBI	+	carbon source
[Ref.: #23134]	malate ChEBI	+	other
[Ref.: #23357]	maltose ChEBI	+	carbon source
[Ref.: #23134]	maltose ChEBI	+	other
[Ref.: #23134]	mannitol ChEBI	+	other
[Ref.: #23134]	mannose ChEBI	+	other
[Ref.: #23357]	melibiose ChEBI	+	carbon source
[Ref.: #23134]	melibiose ChEBI	+/-	builds acid from
[Ref.: #23357]	methyl alpha-D-glucopyranoside ChEBI	-	carbon source
[Ref.: #23357]	monomethyl succinate ChEBI	+	carbon source
[Ref.: #23357]	myo-inositol ChEBI	+	carbon source
[Ref.: #23357]	N-acetylgalactosamine ChEBI	+	carbon source
[Ref.: #23134]	N-acetylglucosamine ChEBI	+	other
[Ref.: #23134]	nitrate ChEBI	-	reduction
[Ref.: #23134]	phenylacetate ChEBI	-	other
[Ref.: #23357]	propionate ChEBI	-	carbon source
[Ref.: #23357]	psicose ChEBI	+	carbon source
[Ref.: #23357]	putrescine ChEBI	+	carbon source
[Ref.: #23357]	pyruvate ChEBI	+	carbon source
[Ref.: #23357]	raffinose ChEBI	-	carbon source
[Ref.: #23357]	ribitol ChEBI	+	carbon source
[Ref.: #23134]	starch ChEBI	-	hydrolysis
[Ref.: #23357]	succinamate ChEBI	+	carbon source
[Ref.: #23357]	succinate ChEBI	+	carbon source
[Ref.: #23357]	sucrose ChEBI	+	carbon source
[Ref.: #23357]	thymidine ChEBI	-	carbon source
[Ref.: #23134]	tryptophan ChEBI	-	energy source
[Ref.: #23357]	turanose ChEBI	+	carbon source
[Ref.: #23134]	tween 20 ChEBI	-	other
[Ref.: #23357]	tween 40 ChEBI	-	carbon source
[Ref.: #23134]	tween 80 ChEBI	-	other
[Ref.: #23134]	tyrosine ChEBI	-	hydrolysis
[Ref.: #23357]	uridine ChEBI	-	carbon source
[Ref.: #23357]	urocanic acid ChEBI	+	carbon source
[Ref.: #23134]	xanthine ChEBI	+	other
[Ref.: #23357]	xylitol ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration
[Ref.: #23134]	carbenicillin ChEBI	yes	100	µg (disc)
[Ref.: #23134]	chloramphenicol ChEBI	yes	30	µg (disc)
[Ref.: #23134]	erythromycin ChEBI	yes	15	µg (disc)
[Ref.: #23134]	framycetin ChEBI	yes	50	µg (disc)
[Ref.: #23134]	nalidixic acid ChEBI	yes	30	µg (disc)
[Ref.: #23134]	norfloxacin ChEBI	yes	10	µg (disc)
[Ref.: #23134]	novobiocin ChEBI	yes	30	µg (disc)
[Ref.: #23134]	rifampicin ChEBI	yes	5	µg (disc)
[Ref.: #23134]	streptomycin ChEBI	yes	10	µg (disc)
[Ref.: #23134]	tetracycline ChEBI	yes	30	µg (disc)

	Metabolite production	Metabolite	Production
[Ref.: #23134]		acetoin ChEBI	no
[Ref.: #23134]		indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #23134]	acetoin ChEBI	-
[Ref.: #23134]	glucose ChEBI		-
[Ref.: #23134]	indole ChEBI			-

	Enzyme	Enzyme activity	EC number
[Ref.: #23134]	acid phosphatase	+	3.1.3.2
[Ref.: #23357]	alanine aminopeptidase	-
[Ref.: #23134]	alkaline phosphatase	+	3.1.3.1
[Ref.: #23134]	alpha-fucosidase	-	3.2.1.51
[Ref.: #23134]	alpha-galactosidase	-	3.2.1.22
[Ref.: #23134]	alpha-glucosidase	-	3.2.1.20
[Ref.: #23134]	alpha-mannosidase	-	3.2.1.24
[Ref.: #23134]	arginine dihydrolase	-	3.5.3.6
[Ref.: #23134]	beta-galactosidase	-	3.2.1.23
[Ref.: #23134]	beta-glucosidase	-	3.2.1.21
[Ref.: #23134]	beta-glucuronidase	-	3.2.1.31
[Ref.: #23134]	catalase	+	1.11.1.6
[Ref.: #23134]	chymotrypsin	-	3.4.4.5
[Ref.: #23134]	cystine arylamidase	-	3.4.11.3
[Ref.: #23134]	cytochrome oxidase	+	1.9.3.1
[Ref.: #23134]	esterase	+
[Ref.: #23134]	esterase lipase (C 8)	+
[Ref.: #23134]	leucine arylamidase	+	3.4.11.1
[Ref.: #23134]	lipase (C 14)	-
[Ref.: #23134]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #23134]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #23357]	phenylalanine deaminase	-	4.3.1.5
[Ref.: #23134]	trypsin	+	3.4.21.4
[Ref.: #23134]	tryptophan deaminase	-	4.1.99.1
[Ref.: #23134]	urease	+	3.5.1.5
	Only first 10 entries are displayed. Click here to see all.

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	100	8 of 8
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	CMP-KDO biosynthesis	100	4 of 4
[Ref.: #66794]	threonine metabolism	100	10 of 10
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	quinate degradation	100	2 of 2
[Ref.: #66794]	Entner Doudoroff pathway	100	10 of 10
[Ref.: #66794]	allantoin degradation	100	9 of 9
[Ref.: #66794]	kanosamine biosynthesis II	100	2 of 2
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	denitrification	100	2 of 2
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	ribulose monophosphate pathway	100	2 of 2
[Ref.: #66794]	pentose phosphate pathway	100	11 of 11
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	photosynthesis	92.86	13 of 14
[Ref.: #66794]	proline metabolism	90.91	10 of 11
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	ketogluconate metabolism	87.5	7 of 8
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	leucine metabolism	84.62	11 of 13
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	NAD metabolism	83.33	15 of 18
[Ref.: #66794]	vitamin B12 metabolism	82.35	28 of 34
[Ref.: #66794]	propionate fermentation	80	8 of 10
[Ref.: #66794]	phenylacetate degradation (aerobic)	80	4 of 5
[Ref.: #66794]	methanofuran biosynthesis	80	4 of 5
[Ref.: #66794]	alanine metabolism	79.31	23 of 29
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	citric acid cycle	78.57	11 of 14
[Ref.: #66794]	glutamate and glutamine metabolism	78.57	22 of 28
[Ref.: #66794]	pyrimidine metabolism	77.78	35 of 45
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	butanoate fermentation	75	3 of 4
[Ref.: #66794]	degradation of sugar alcohols	75	12 of 16
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	purine metabolism	74.47	70 of 94
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	peptidoglycan biosynthesis	73.33	11 of 15
[Ref.: #66794]	vitamin B6 metabolism	72.73	8 of 11
[Ref.: #66794]	metabolism of disaccharids	72.73	8 of 11
[Ref.: #66794]	oxidative phosphorylation	72.53	66 of 91
[Ref.: #66794]	histidine metabolism	72.41	21 of 29
[Ref.: #66794]	degradation of sugar acids	72	18 of 25
[Ref.: #66794]	degradation of pentoses	71.43	20 of 28
[Ref.: #66794]	glutathione metabolism	71.43	10 of 14
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	non-pathway related	71.05	27 of 38
[Ref.: #66794]	urea cycle	69.23	9 of 13
[Ref.: #66794]	sulfate reduction	69.23	9 of 13
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	cysteine metabolism	66.67	12 of 18
[Ref.: #66794]	methanogenesis from CO2	66.67	8 of 12
[Ref.: #66794]	arginine metabolism	66.67	16 of 24
[Ref.: #66794]	selenocysteine biosynthesis	66.67	4 of 6
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	methane metabolism	66.67	2 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	sulfoquinovose degradation	66.67	2 of 3
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	lysine metabolism	64.29	27 of 42
[Ref.: #66794]	tetrahydrofolate metabolism	64.29	9 of 14
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	isoprenoid biosynthesis	61.54	16 of 26
[Ref.: #66794]	glycine betaine biosynthesis	60	3 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	60	3 of 5
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	cellulose degradation	60	3 of 5
[Ref.: #66794]	creatinine degradation	60	3 of 5
[Ref.: #66794]	tryptophan metabolism	57.89	22 of 38
[Ref.: #66794]	tyrosine metabolism	57.14	8 of 14
[Ref.: #66794]	nitrate assimilation	55.56	5 of 9
[Ref.: #66794]	lipid metabolism	54.84	17 of 31
[Ref.: #66794]	ascorbate metabolism	54.55	12 of 22
[Ref.: #66794]	methionine metabolism	53.85	14 of 26
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	degradation of hexoses	50	9 of 18
[Ref.: #66794]	lactate fermentation	50	2 of 4
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	50	6 of 12
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	coenzyme M biosynthesis	50	5 of 10
[Ref.: #66794]	dTDPLrhamnose biosynthesis	50	4 of 8
[Ref.: #66794]	biotin biosynthesis	50	2 of 4
[Ref.: #66794]	3-phenylpropionate degradation	46.67	7 of 15
[Ref.: #66794]	phenol degradation	45	9 of 20
[Ref.: #66794]	benzoyl-CoA degradation	42.86	3 of 7
[Ref.: #66794]	cardiolipin biosynthesis	42.86	3 of 7
[Ref.: #66794]	carotenoid biosynthesis	40.91	9 of 22
[Ref.: #66794]	ethylmalonyl-CoA pathway	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	vitamin K metabolism	40	2 of 5
[Ref.: #66794]	hydrogen production	40	2 of 5
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	arachidonic acid metabolism	38.89	7 of 18
[Ref.: #66794]	androgen and estrogen metabolism	37.5	6 of 16
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	polyamine pathway	34.78	8 of 23
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	30.77	4 of 13
[Ref.: #66794]	4-hydroxyphenylacetate degradation	30	3 of 10
[Ref.: #66794]	myo-inositol biosynthesis	30	3 of 10
[Ref.: #66794]	mevalonate metabolism	28.57	2 of 7
[Ref.: #66794]	chlorophyll metabolism	27.78	5 of 18
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	23.53	4 of 17
[Ref.: #66794]	phenylpropanoid biosynthesis	23.08	3 of 13
[Ref.: #66794]	4-hydroxymandelate degradation	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16081]	Sample type/isolated from	Altamira Cave
[Ref.: #16081]	Geographic location (country and/or sea, region)	Cantabria
[Ref.: #16081]	Country	Spain
[Ref.: #16081]	Country ISO 3 Code	ESP
[Ref.: #16081]	Continent	Europe

[Ref.: #67771]	Sample type/isolated from	From Altamira Cave
[Ref.: #67771]	Geographic location (country and/or sea, region)	Cantabria
[Ref.: #67771]	Country	Spain
[Ref.: #67771]	Country ISO 3 Code	ESP
[Ref.: #67771]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ372921 (>99% sequence identity) for Aureimonas altamirensis from Microbeatlas

Aquatic Samples	847
Soil Samples	1594
Animal Samples	4114
Plant Samples	1050
Total Samples	7605

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16081]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16081]	Aurantimonas altamirensis strain S21B 16S ribosomal RNA gene, partial sequence	DQ372921	1366	ENA	1121026 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aureimonas altamirensis DSM 21988	GCA_900141975	scaffold	GenBank	1121026 tax ID	*
[Ref.: #66792]	Aureimonas altamirensis DSM 21988	GCA_001463885	contig	GenBank	370622 tax ID	*
[Ref.: #66792]	Aureimonas altamirensis DSM 21988	1121026.3	wgs	PATRIC	1121026 tax ID	*
[Ref.: #66792]	Aureimonas altamirensis strain DSM 21988	370622.4	wgs	PATRIC	370622 tax ID	*
[Ref.: #66792]	Aureimonas altamirensis DSM 21988	2585427611	draft	JGI IMG/M	1121026 tax ID	*
[Ref.: #66792]	Aureimonas altamirensis DSM 21988	2663763019	draft	JGI IMG/M	1121026 tax ID	*

[Ref.: #16081]

GC-content

71.8 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Aureimonas altamirensis strain DSM 21988 PATRIC: 370622.8
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aureimonas altamirensis DSM 21988 DSM 21988 NCBI: GCA_900141975.1
[Ref.: #69480]	motile	no	84.285	yes
[Ref.: #69480]	flagellated	no	95.703	no
[Ref.: #69480]	gram-positive	no	97.208	no
[Ref.: #69480]	anaerobic	no	98.31	no
[Ref.: #69480]	aerobic	yes	91.9	yes
[Ref.: #69480]	halophile	no	90.839	no
[Ref.: #69480]	spore-forming	no	96.425	yes
[Ref.: #69480]	thermophile	no	96.416	no
[Ref.: #69480]	glucose-util	yes	87.784	no
[Ref.: #69480]	glucose-ferment	no	90.179	yes

Availability in culture collections External links

[Ref.: #16081]

Culture collection no.

DSM 21988, CECT 7138, CIP 109525, KCTC 22106, LMG 23375

[Ref.: #70210]

SI-ID 289502

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mangrovicella endophytica gen. nov., sp. nov., a new member of the family Aurantimonadaceae isolated from Aegiceras corniculatum.	Li FN, Liao S, Guo M, Tuo L, Yan X, Li W, Jin T, Lee SM, Sun CH	Int J Syst Evol Microbiol	10.1099/ijsem.0.002907	2018	*
Phylogeny	Aureimonas ferruginea sp. nov. and Aureimonas rubiginis sp. nov., two siderophore-producing bacteria isolated from rusty iron plates.	Lin SY, Hameed A, Liu YC, Hsu YH, Lai WA, Shen FT, Young LS, Tsai CF, Young CC	Int J Syst Evol Microbiol	10.1099/ijs.0.047431-0	2012	*
Phylogeny	Reclassification of Aurantimonas altamirensis (Jurado et al. 2006), Aurantimonas ureilytica (Weon et al. 2007) and Aurantimonas frigidaquae (Kim et al. 2008) as members of a new genus, Aureimonas gen. nov., as Aureimonas altamirensis gen. nov., comb. nov., Aureimonas ureilytica comb. nov. and Aureimonas frigidaquae comb. nov., and emended descriptions of the genera Aurantimonas and Fulvimarina.	Rathsack K, Reitner J, Stackebrandt E, Tindall BJ	Int J Syst Evol Microbiol	10.1099/ijs.0.027029-0	2010	*
Phylogeny	Aurantimonas altamirensis sp. nov., a member of the order Rhizobiales isolated from Altamira Cave.	Jurado V, Gonzalez JM, Laiz L, Saiz-Jimenez C	Int J Syst Evol Microbiol	10.1099/ijs.0.64397-0	2006	*

References

#16081

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21988

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23134

Valme Jurado, Juan M. Gonzalez, Leonila Laiz, Cesareo Saiz-Jimenez: Aurantimonas altamirensis sp. nov., a member of the order Rhizobiales isolated from Altamira Cave. IJSEM 56: 2583 - 2585 2006 ( DOI 10.1099/ijs.0.64397-0 , PubMed 17082395 )

#23357

K. Rathsack, J. Reitner, E. Stackebrandt, B. J. Tindall: Reclassification of Aurantimonas altamirensis (Jurado et al. 2006), Aurantimonas ureilytica (Weon et al. 2007) and Aurantimonas frigidaquae (Kim et al. 2008) as members of a new genus, Aureimonas gen. nov., as Aureimonas altamirensis gen. nov., comb. nov., Aureimonas ureilytica comb. nov. and Aureimonas frigidaquae comb. nov., and emended descriptions of the genera Aurantimonas and Fulvimarina. IJSEM 61: 2722 - 2728 2011 ( DOI 10.1099/ijs.0.027029-0 , PubMed 21186293 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#70210

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID289502.1 )

* These data were automatically processed and therefore are not curated

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Aureimonas altamirensis strain DSM 21988

Aureimonas altamirensis DSM 21988 DSM 21988

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