Name: Serratia fonticola C1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5169

Type strain:

Species: Serratia fonticola

Strain Designation: C1

Culture col. no.: DSM 22080, CCM 7984, CCUG 57457, CIP 111024

Strain history: CIP <- 2016, DSMZ, Serratia glossinae <- ML Fardeau, IRD, Provence Univ., Marseille, France: strain C1 <- A. Geiger et al.

NCBI tax ID(s): 649197 (strain), 47917 (species)

SI-ID 407073

DSM 22080, CCUG 57457, CIP 111024

Other strains from Serratia fonticola

Section

Serratia fonticola C1 is a facultative anaerobe, mesophilic, motile bacterium that was isolated from midgut of the tsetse fly Glossina palpalis gambiensis. Flies collected in Burkina Faso and maintained in an insectary at Montpellier.

motile
rod-shaped
facultative anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Yersiniaceae*
	Genus	*Serratia*
	Species	**Serratia fonticola**
	Full Scientific Name (LPSN)	Serratia fonticola Gavini et al. 1979 (Approved Lists 1980)

Synonym

Serratia glossinae

Information on morphological and physiological properties Morphology

[Ref.: #119421]	Gram stain	negative

[Ref.: #119421]	Cell shape	rod-shaped
[Ref.: #29454]	Cell shape	rod-shaped

[Ref.: #119421]	Motility	yes
[Ref.: #29454]	Motility	yes

[Ref.: #29454]	Cell length	4 µm

[Ref.: #29454]	Cell width	0.9 µm

[Ref.: #61334]

Incubation period

1 day

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16125]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #16125]

Culture medium growth

[Ref.: #16125]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16125]

Culture medium composition

expand / minimize

[Ref.: #119421]

Culture medium

CIP Medium 72

[Ref.: #119421]

Culture medium growth

[Ref.: #119421]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #16125]	growth	28 °C
[Ref.: #29454]	growth	25-35 °C
[Ref.: #29454]	optimum	30 °C
[Ref.: #61334]	growth	30 °C

[Ref.: #16125]	Temperature range	mesophilic
[Ref.: #29454]	Temperature range	mesophilic
[Ref.: #61334]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29454]			optimum	7.55
[Ref.: #29454]			growth	6.7-8.4

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29454]	Oxygen tolerance	facultative anaerobe
[Ref.: #61334]	Oxygen tolerance	aerobe

[Ref.: #29454]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29454]	arabinose ChEBI	+	carbon source
[Ref.: #29454]	citrate ChEBI	+	carbon source
[Ref.: #29454]	fructose ChEBI	+	carbon source
[Ref.: #29454]	galactose ChEBI	+	carbon source
[Ref.: #29454]	glucose ChEBI	+	carbon source
[Ref.: #29454]	glycerol ChEBI	+	carbon source
[Ref.: #29454]	maltose ChEBI	+	carbon source
[Ref.: #29454]	mannitol ChEBI	+	carbon source
[Ref.: #29454]	mannose ChEBI	+	carbon source
[Ref.: #29454]	melibiose ChEBI	+	carbon source
[Ref.: #29454]	nitrate ChEBI	+	reduction
[Ref.: #29454]	raffinose ChEBI	+	carbon source
[Ref.: #29454]	sorbitol ChEBI	+	carbon source
[Ref.: #29454]	trehalose ChEBI	+	carbon source
[Ref.: #29454]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29454]		catalase	+	1.11.1.6
[Ref.: #29454]		urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16125]	Sample type/isolated from	midgut of the tsetse fly Glossina palpalis gambiensis. Flies collected in Burkina Faso and maintained in an insectary at Montpellier
[Ref.: #16125]	Host species	Glossina palpalis gambiensis
[Ref.: #16125]	Country	Burkina Faso
[Ref.: #16125]	Country ISO 3 Code	BFA
[Ref.: #16125]	Continent	Africa

[Ref.: #61334]	Sample type/isolated from	Glossina palpalis gambiensis (tse-tse fly),midgut
[Ref.: #61334]	Sampling date	2007-12-01

[Ref.: #119421]	Sample type/isolated from	Animal, Midgut of the tsetse fly, Glossina palpalis gambiensis collected in Burkina Faso and maintained in an insectary at Montpellier
[Ref.: #119421]	Country	Burkina Faso
[Ref.: #119421]	Country ISO 3 Code	BFA
[Ref.: #119421]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Insecta
#Host Body-Site	#Gastrointestinal tract	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16125]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119421]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16125]	Serratia glossinae DSM 22080 16S ribosomal RNA gene, partial sequence	FJ790328	1488	ENA	649197 tax ID

[Ref.: #16125]	GC-content	53.6 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29454]	GC-content	53.6 mol%

Availability in culture collections External links

[Ref.: #16125]

Culture collection no.

DSM 22080, CCM 7984, CCUG 57457, CIP 111024

[Ref.: #74661]

SI-ID 407073

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Serratia glossinae Geiger et al. 2010 is a later synonym of Serratia fonticola Gavini et al. 1979.	Kampfer P, Glaeser SP	Int J Syst Evol Microbiol	10.1099/ijs.0.000112	2015	*
Phylogeny	Serratia glossinae sp. nov., isolated from the midgut of the tsetse fly Glossina palpalis gambiensis.	Geiger A, Fardeau ML, Falsen E, Ollivier B, Cuny G	Int J Syst Evol Microbiol	10.1099/ijs.0.013441-0	2009	*

References

#16125

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22080

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29454

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25859 (see below)

#61334 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 57457

#74661

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407073.1 )

#119421 Collection of Institut Pasteur ; Curators of the CIP; CIP 111024

#25859

IJSEM 1261 2010 ( DOI 10.1099/ijs.0.013441-0 , PubMed 19667382 )

* These data were automatically processed and therefore are not curated

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