Morganella morganii subsp. sibonii (DSM 14850, ATCC 49948, JCM 16939)

Name: Morganella morganii subsp. sibonii (DSM 14850, ATCC 49948, JCM 16939)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4988

Type strain

Strain Designation AB 2048, 11812, 8103-85

Culture col. no. DSM 14850 ATCC 49948 JCM 16939 CCUG 30886 AB 2048 6 more

NCBI tax ID(s) 180435

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- ATCC <- C. F. Riddle <- W. Frederiksen; AB 2048 JCM <-- DSM 14850 <-- ATCC 49948 <-- C. F. Riddle <-- W. Frederiksen AB 2048. CIP <- 1993, K.T. Jensen, Statens Serum Inst., Copenhagen, Denmark: strain AB 2048 = 8103-85 <- Lyngby, Denmark, "Enterobacterium": strain 11812

Links

Morganella morganii subsp. sibonii AB 2048 is a facultative anaerobe, Gram-negative, rod-shaped bacterium that was isolated from sputum.

Gram-negative rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 42772

ATCC 49948,CCUG 30886,CIP 103648,CCM 4350,DSM 14850,NCTC 12357,JCM 16939

@ref 20215

Last LPSN update 2026-05-29 08:26:03

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Morganellaceae

Genus Morganella

Species Morganella morganii subsp. sibonii

Full scientific name Morganella morganii subsp. sibonii Jensen et al. 1992

Synonyms (1)

"Morganella sibonii"

BacDive ID	Other strains from **Morganella morganii subsp. sibonii** (3)	Type strain
146316	M. morganii subsp. sibonii CCUG 30884
146317	M. morganii subsp. sibonii CCUG 30885
146318	M. morganii subsp. sibonii CCUG 30888

Morphology

Cell morphology

@ref	Gram stain	Cell shape
121144	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5578	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
34410	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
121144	CIP Medium 72	Medium recipe at CIP
121144	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
5578	positive	growth	37
34410	positive	growth	30
67770	positive	growth	37
121144	positive	growth	10-41
121144	negative	growth	5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
121144	facultative anaerobe
125439	obligate aerobe	94.456

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68368	27613 ChEBI	amygdalin	-	fermentation	from API 20E
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
121144	16947 ChEBI	citrate	-	carbon source
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68368	16899 ChEBI	D-mannitol	-	fermentation	from API 20E
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
121144	17234 ChEBI	glucose	+	degradation
68368	30849 ChEBI	L-arabinose	-	fermentation	from API 20E
68368	62345 ChEBI	L-rhamnose	-	fermentation	from API 20E
68368	25094 ChEBI	lysine	+	degradation	from API 20E
121144	15792 ChEBI	malonate	-	assimilation
121144	29864 ChEBI	mannitol	-	fermentation
68368	28053 ChEBI	melibiose	-	fermentation	from API 20E
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
121144	17632 ChEBI	nitrate	+	reduction
121144	16301 ChEBI	nitrite	-	reduction
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
121144	132112 ChEBI	sodium thiosulfate	-	builds gas from
68368	30911 ChEBI	sorbitol	-	fermentation	from API 20E
68368	17992 ChEBI	sucrose	-	fermentation	from API 20E
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121144	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
121144	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
121144	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-			from API 20E
121144	17234 ChEBI	glucose		-
68368	35581 ChEBI	indole			+	from API 20E

Enzymes

@ref	Value	Activity	Ec
121144	alcohol dehydrogenase	-	1.1.1.1
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
121144	beta-galactosidase	-	3.2.1.23
68368	beta-galactosidase	-	3.2.1.23	from API 20E
121144	catalase	+	1.11.1.6
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
121144	gelatinase	-
68368	gelatinase	-		from API 20E
121144	lysine decarboxylase	+	4.1.1.18
68368	lysine decarboxylase	+	4.1.1.18	from API 20E
121144	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
121144	oxidase	-
121144	tryptophan deaminase	+
68368	tryptophan deaminase	+	4.1.99.1	from API 20E
121144	urease	+	3.5.1.5
68368	urease	+	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
5578	-	-	+	-	-	-	+	+	+	-	-	+	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Fluids	#Sputum

Isolation

@ref	Sample type	Host species	Sampling date	Country	Country ISO 3 Code	Continent	Isolation date
5578	sputum			Denmark	DNK	Europe
50316	Human sputum	Homo sapiens	1979-03-15	Denmark	DNK	Europe
67770	Sputum
121144	Human, Sputum	Homo sapiens		Denmark	DNK	Europe	1979

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5578	2	Risk group (German classification) According to TRBA 466
121144	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4056024v1 assembly for Morganella morganii subsp. sibonii DSM 14850	contig	GCA_040560245	180435	49.2

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5578	Morganella morganii subsp. sibonii strain DSM 14850 16S ribosomal RNA gene, partial sequence	DQ358146	1356		180435

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4056024v1 assembly for Morganella morganii subsp. sibonii DSM 14850
NCBI: GCA_040560245

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.46	no
125439	gram_stain	BacteriaNetⓘ	variable	49.08	no
125439	motility	BacteriaNetⓘ	yes	64.52	no
125439	spore_formation	BacteriaNetⓘ	no	87.26	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genomic Analysis of Two Histamine-Producing Strains Isolated from Yellowfin Tuna.	Wang Y, Wang D, Chen S, Yu G, Ma Z, Wei Y, Li C, Wang Y, Shen C, Zhao Y.	Foods	10.3390/foods14091532	2025
Phylogeny	The Identification of Ethidium Bromide-Degrading Bacteria from Laboratory Gel Electrophoresis Waste.	Gandhi VP, Kesari KK, Kumar A.	BioTech (Basel)	10.3390/biotech11010004	2022
	The Presence of Four Pathogenic Oral Bacterial Species in Six Wild Snake Species from Southern Taiwan: Associated Factors.	Lin WH, Tsai TS, Chuang PC.	Microorganisms	10.3390/microorganisms12020263	2024
	Mobile insertion cassette elements found in small non-transmissible plasmids in Proteeae may explain qnrD mobilization.	Guillard T, Grillon A, de Champs C, Cartier C, Madoux J, Bercot B, Lebreil AL, Lozniewski A, Riahi J, Vernet-Garnier V, Cambau E.	PLoS One	10.1371/journal.pone.0087801	2014
	Description of a 2,683-base-pair plasmid containing qnrD in two Providencia rettgeri isolates.	Guillard T, Cambau E, Neuwirth C, Nenninger T, Mbadi A, Brasme L, Vernet-Garnier V, Bajolet O, de Champs C.	Antimicrob Agents Chemother	10.1128/aac.00081-11	2012
Phylogeny	Antibacterial activities of multi drug resistant Myroides odoratimimus bacteria isolated from adult flesh flies (Diptera: sarcophagidae) are independent of metallo beta-lactamase gene.	Dharne MS, Gupta AK, Rangrez AY, Ghate HV, Patole MS, Shouche YS.	Braz J Microbiol	10.1590/s1517-838220080002000035	2008
Phylogeny	Morganella psychrotolerans sp. nov., a histamine-producing bacterium isolated from various seafoods.	Emborg J, Dalgaard P, Ahrens P	Int J Syst Evol Microbiol	10.1099/ijs.0.64357-0	2006
Phylogeny	Recognition of Morganella subspecies, with proposal of Morganella morganii subsp. morganii subsp. nov. and Morganella morganii subsp. sibonii subsp. nov.	Jensen KT, Frederiksen W, Hickman-Brenner FW, Steigerwalt AG, Riddle CF, Brenner DJ	Int J Syst Bacteriol	10.1099/00207713-42-4-613	1992

References

#5578	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14850
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#34410	; Curators of the CIP;
#50316	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30886
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#121144	Collection of Institut Pasteur ; Curators of the CIP; CIP 103648
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Morganella morganii subsp. sibonii (DSM 14850, ATCC 49948, JCM 16939)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API 20E

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_040560245

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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