Name: Marinobacter lipolyticus SM19
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 478

Type strain:

Species: Marinobacter lipolyticus

Strain Designation: SM19

Culture col. no.: DSM 15157, CCM 7048, CIP 107627, NCIMB 13907

Strain history: CIP <- 2002, A. Ventosa, Sevilla Univ., Sevilla, Spain: strain SM19

NCBI tax ID(s): 209639 (species)

SI-ID 127997

CCM 7048, CIP 107627, DSM 15157, NCIMB 13907, KCTC 12477, LMG 23831

Special Collections

Section

Marinobacter lipolyticus SM19 is a facultative aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from saline soil.

colony-forming
Gram-negative
motile
rod-shaped
facultative aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Alteromonadaceae*
	Genus	*Marinobacter*
	Species	**Marinobacter lipolyticus**
	Full Scientific Name (LPSN)	Marinobacter lipolyticus Martín et al. 2003

Information on morphological and physiological properties Morphology

[Ref.: #23296]	Gram stain	negative
[Ref.: #120621]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %98.5

[Ref.: #23296]	Cell length	2.5-3.5 µm

[Ref.: #23296]	Cell width	0.3-0.5 µm

[Ref.: #23296]	Cell shape	rod-shaped
[Ref.: #120621]	Cell shape	rod-shaped

[Ref.: #23296]	Motility	yes
[Ref.: #120621]	Motility	no

[Ref.: #23296]	Colony size	2-3 mm
[Ref.: #23296]	Colony color	cream
[Ref.: #23296]	Colony shape	circular
[Ref.: #23296]	Cultivation medium used	SW 7.5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5732]

Culture medium

15% MH MEDIUM (DSMZ Medium 582)

[Ref.: #5732]

Culture medium growth

[Ref.: #5732]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5732]

Culture medium composition

expand / minimize

[Ref.: #23296]

Culture medium

SW 7.5

[Ref.: #23296]

Culture medium growth

[Ref.: #36164]

Culture medium

Marine agar (MA)

[Ref.: #36164]

Culture medium growth

[Ref.: #36164]

Culture medium composition

expand / minimize

[Ref.: #120621]

Culture medium

CIP Medium 13

[Ref.: #120621]

Culture medium growth

[Ref.: #120621]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5732]		growth	37 °C
[Ref.: #23296]		growth	15-40 °C
[Ref.: #23296]		optimum	37 °C
[Ref.: #36164]		growth	37 °C
[Ref.: #120621]		growth	15-41 °C
[Ref.: #120621]	no	growth	5 °C

	pH	Kind of pH		pH
[Ref.: #23296]			optimum	7.5
[Ref.: #23296]			growth	5.0-10.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23296]

Oxygen tolerance

facultative aerobe

[Ref.: #23296]	Ability of spore formation	no
[Ref.: #69480]	Ability of spore formation	no Confidence in %91.311

[Ref.: #23296]

Halophily / tolerance level

moderately halophilic

	Salt	Tested relation		Salt conc.
[Ref.: #23296]	NaCl		growth	1-15	%
[Ref.: #23296]	NaCl		optimum	7.5	%
[Ref.: #23296]	NaCl	no	growth	0	%
[Ref.: #120621]	NaCl		growth	4-8	%
[Ref.: #120621]	NaCl	no	growth	0	%
[Ref.: #120621]	NaCl	no	growth	2	%
[Ref.: #120621]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23296]	(-)-quinic acid ChEBI	-	carbon source
[Ref.: #23296]	2,3-butanediol ChEBI	-	carbon source
[Ref.: #23296]	2-hydroxybutyrate ChEBI	-	carbon source
[Ref.: #23296]	2-oxobutanoate ChEBI	-	carbon source
[Ref.: #23296]	2-oxoglutarate ChEBI	-	carbon source
[Ref.: #23296]	2-oxopentanoate ChEBI	-	carbon source
[Ref.: #23296]	4-hydroxy-L-proline ChEBI	-	carbon source
[Ref.: #23296]	4-hydroxybutyrate ChEBI	-	carbon source
[Ref.: #23296]	4-hydroxyphenylacetic acid ChEBI	-	carbon source
[Ref.: #23296]	acetate ChEBI	-	carbon source
[Ref.: #23296]	alpha-cyclodextrin ChEBI	-	carbon source
[Ref.: #23296]	ammonium ChEBI	+	nitrogen source
[Ref.: #23296]	beta-hydroxybutyrate ChEBI	-	carbon source
[Ref.: #23296]	bromosuccinate ChEBI	-	carbon source
[Ref.: #23296]	cellobiose ChEBI	-	carbon source
[Ref.: #23296]	cis-aconitate ChEBI	-	carbon source
[Ref.: #23296]	citrate ChEBI	-	carbon source
[Ref.: #23296]	citrate ChEBI	+	carbon source
[Ref.: #23296]	D-alanine ChEBI	-	carbon source
[Ref.: #23296]	D-arabitol ChEBI	-	carbon source
[Ref.: #23296]	D-fructose ChEBI	+	carbon source
[Ref.: #23296]	D-fructose ChEBI	+	energy source
[Ref.: #23296]	D-galactonate ChEBI	-	carbon source
[Ref.: #23296]	D-galactose ChEBI	-	carbon source
[Ref.: #23296]	D-glucarate ChEBI	-	carbon source
[Ref.: #23296]	D-gluconate ChEBI	+	carbon source
[Ref.: #23296]	D-gluconate ChEBI	+	energy source
[Ref.: #23296]	D-glucosaminic acid ChEBI	-	carbon source
[Ref.: #23296]	D-glucose ChEBI	+	builds acid from
[Ref.: #23296]	D-glucose ChEBI	+	carbon source
[Ref.: #23296]	D-glucose ChEBI	+	energy source
[Ref.: #23296]	D-glucose 6-phosphate ChEBI	-	carbon source
[Ref.: #23296]	D-glucuronate ChEBI	-	carbon source
[Ref.: #23296]	D-mannitol ChEBI	+	builds acid from
[Ref.: #23296]	D-mannitol ChEBI	+	carbon source
[Ref.: #23296]	D-mannitol ChEBI	+	energy source
[Ref.: #23296]	D-mannose ChEBI	-	carbon source
[Ref.: #23296]	D-psicose ChEBI	-	carbon source
[Ref.: #23296]	D-serine ChEBI	-	carbon source
[Ref.: #23296]	D-sorbitol ChEBI	-	carbon source
[Ref.: #23296]	D-trehalose ChEBI	+	carbon source
[Ref.: #23296]	D-trehalose ChEBI	+	energy source
[Ref.: #23296]	dextrin ChEBI	+	carbon source
[Ref.: #23296]	dextrin ChEBI	+	energy source
[Ref.: #23296]	DL-carnitine ChEBI	-	carbon source
[Ref.: #23296]	dna ChEBI	-	hydrolysis
[Ref.: #23296]	erythritol ChEBI	-	carbon source
[Ref.: #120621]	esculin ChEBI	-	hydrolysis
[Ref.: #23296]	ethanolamine ChEBI	-	carbon source
[Ref.: #23296]	formate ChEBI	-	carbon source
[Ref.: #23296]	gamma-aminobutyric acid ChEBI	-	carbon source
[Ref.: #23296]	gelatin ChEBI	-	hydrolysis
[Ref.: #23296]	glucose ChEBI	-	fermentation
[Ref.: #23296]	glucose 1-phosphate ChEBI	-	carbon source
[Ref.: #23296]	glucuronamide ChEBI	-	carbon source
[Ref.: #23296]	glycerol ChEBI	-	builds acid from
[Ref.: #23296]	glycerol ChEBI	-	carbon source
[Ref.: #23296]	glycogen ChEBI	+	carbon source
[Ref.: #23296]	glycogen ChEBI	+	energy source
[Ref.: #23296]	glycyl L-aspartic acid ChEBI	-	carbon source
[Ref.: #23296]	glycyl-l-glutamate ChEBI	-	carbon source
[Ref.: #23296]	inosine ChEBI	+	carbon source
[Ref.: #23296]	inosine ChEBI	+	energy source
[Ref.: #23296]	itaconate ChEBI	-	carbon source
[Ref.: #23296]	L-alaninamide ChEBI	-	carbon source
[Ref.: #23296]	L-alanine ChEBI	-	carbon source
[Ref.: #23296]	L-alanylglycine ChEBI	-	carbon source
[Ref.: #23296]	L-arabinose ChEBI	-	carbon source
[Ref.: #23296]	L-asparagine ChEBI	-	carbon source
[Ref.: #23296]	L-aspartate ChEBI	-	carbon source
[Ref.: #23296]	L-fucose ChEBI	-	carbon source
[Ref.: #23296]	L-glutamate ChEBI	-	carbon source
[Ref.: #23296]	L-histidine ChEBI	-	carbon source
[Ref.: #23296]	L-leucine ChEBI	-	carbon source
[Ref.: #23296]	L-ornithine ChEBI	-	carbon source
[Ref.: #23296]	L-phenylalanine ChEBI	-	carbon source
[Ref.: #23296]	L-proline ChEBI	-	carbon source
[Ref.: #23296]	L-pyroglutamic acid ChEBI	-	carbon source
[Ref.: #23296]	L-rhamnose ChEBI	-	carbon source
[Ref.: #23296]	L-serine ChEBI	-	carbon source
[Ref.: #23296]	L-threonine ChEBI	-	carbon source
[Ref.: #23296]	lactate ChEBI	-	carbon source
[Ref.: #23296]	lactose ChEBI	-	builds acid from
[Ref.: #23296]	lactose ChEBI	-	carbon source
[Ref.: #23296]	lactulose ChEBI	-	carbon source
[Ref.: #23296]	malonate ChEBI	-	carbon source
[Ref.: #23296]	maltose ChEBI	+	builds acid from
[Ref.: #23296]	maltose ChEBI	+	carbon source
[Ref.: #23296]	maltose ChEBI	+	energy source
[Ref.: #23296]	melibiose ChEBI	-	builds acid from
[Ref.: #23296]	melibiose ChEBI	-	carbon source
[Ref.: #23296]	methyl beta-D-glucopyranoside ChEBI	-	carbon source
[Ref.: #23296]	methyl pyruvate ChEBI	+	carbon source
[Ref.: #23296]	methyl pyruvate ChEBI	+	energy source
[Ref.: #23296]	monomethyl succinate ChEBI	-	carbon source
[Ref.: #23296]	myo-inositol ChEBI	-	carbon source
[Ref.: #23296]	N-acetylgalactosamine ChEBI	-	carbon source
[Ref.: #23296]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #23296]	N-acetylglucosamine ChEBI	+	energy source
[Ref.: #23296]	nitrate ChEBI	-	reduction
[Ref.: #120621]	nitrate ChEBI	-	builds gas from
[Ref.: #120621]	nitrate ChEBI	-	reduction
[Ref.: #23296]	nitrite ChEBI	-	reduction
[Ref.: #120621]	nitrite ChEBI	-	builds gas from
[Ref.: #120621]	nitrite ChEBI	-	reduction
[Ref.: #23296]	phenylethylamine ChEBI	-	carbon source
[Ref.: #23296]	propionate ChEBI	-	carbon source
[Ref.: #23296]	putrescine ChEBI	-	carbon source
[Ref.: #23296]	raffinose ChEBI	-	carbon source
[Ref.: #23296]	ribitol ChEBI	-	carbon source
[Ref.: #23296]	sebacic acid ChEBI	-	carbon source
[Ref.: #23296]	starch ChEBI	-	hydrolysis
[Ref.: #23296]	succinamate ChEBI	-	carbon source
[Ref.: #23296]	succinate ChEBI	-	carbon source
[Ref.: #23296]	sucrose ChEBI	-	carbon source
[Ref.: #23296]	thymidine ChEBI	+	carbon source
[Ref.: #23296]	thymidine ChEBI	+	energy source
[Ref.: #23296]	tryptophan ChEBI	-	energy source
[Ref.: #23296]	turanose ChEBI	-	carbon source
[Ref.: #23296]	tween 40 ChEBI	+	carbon source
[Ref.: #23296]	tween 40 ChEBI	+	energy source
[Ref.: #23296]	tween 80 ChEBI	+	carbon source
[Ref.: #23296]	tween 80 ChEBI	+	energy source
[Ref.: #23296]	tween 80 ChEBI	+	hydrolysis
[Ref.: #23296]	uridine ChEBI	-	carbon source
[Ref.: #23296]	urocanic acid ChEBI	-	carbon source
[Ref.: #23296]	xylitol ChEBI	-	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #23296]	acetoin ChEBI	no
[Ref.: #23296]	indole ChEBI	no
[Ref.: #120621]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test	Citrate test
[Ref.: #23296]	acetoin ChEBI	-
[Ref.: #23296]	citrate ChEBI				+
[Ref.: #23296]	glucose ChEBI		-
[Ref.: #23296]	indole ChEBI			-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #120621]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120621]	amylase	+
[Ref.: #23296]	arginine dihydrolase	-	3.5.3.6
[Ref.: #120621]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120621]	caseinase	-	3.4.21.50
[Ref.: #23296]	catalase	+	1.11.1.6
[Ref.: #120621]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23296]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #120621]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #120621]	gelatinase	-
[Ref.: #120621]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #120621]	lipase	+
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #23296]	lysine decarboxylase	-	4.1.1.18
[Ref.: #120621]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #23296]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120621]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120621]	oxidase	+
[Ref.: #120621]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #23296]	phenylalanine deaminase	-	4.3.1.5
[Ref.: #23296]	phosphatase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #23296]	tryptophan deaminase	-	4.1.99.1
[Ref.: #120621]	tryptophan deaminase	-
[Ref.: #120621]	tween esterase	+
[Ref.: #120621]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120621]	2351	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120621]	10519	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5732]	Sample type/isolated from	saline soil
[Ref.: #5732]	Geographic location (country and/or sea, region)	South Spain
[Ref.: #5732]	Country	Spain
[Ref.: #5732]	Country ISO 3 Code	ESP
[Ref.: #5732]	Continent	Europe

[Ref.: #120621]	Sample type/isolated from	Environment, Saline soil
[Ref.: #120621]	Geographic location (country and/or sea, region)	South
[Ref.: #120621]	Country	Spain
[Ref.: #120621]	Country ISO 3 Code	ESP
[Ref.: #120621]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY147906 (>99% sequence identity) for Marinobacter from Microbeatlas

Aquatic Samples	312
Soil Samples	114
Animal Samples	16
Plant Samples	11
Total Samples	453

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5732]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120621]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5732]	Marinobacter lipolyticus 16S ribosomal RNA gene, partial sequence	AY147906	1473	GenBank ENA	209639 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Marinobacter lipolyticus SM19	GCA_000397065	scaffold	GenBank ENA	1318628 tax ID	*
[Ref.: #66792]	Marinobacter lipolyticus SM19	1318628.3	wgs	PATRIC	1318628 tax ID	*
[Ref.: #66792]	Marinobacter lipolyticus SM19	2571042755	draft	JGI IMG/M	1318628 tax ID	*

[Ref.: #5732]	GC-content	57 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #23296]	GC-content	57.0 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Marinobacter lipolyticus SM19 SM19 NCBI: GCA_000397065.2
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98.5	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.218	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	71.729	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	91.311	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	86.491	no

Availability in culture collections External links

[Ref.: #5732]

Culture collection no.

DSM 15157, CCM 7048, CIP 107627, NCIMB 13907

[Ref.: #70157]

SI-ID 127997

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinobacter aromaticivorans sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium isolated from sea sediment.	Cui Z, Gao W, Xu G, Luan X, Li Q, Yin X, Huang D, Zheng L	Int J Syst Evol Microbiol	10.1099/ijsem.0.000722	2015	*
Phylogeny	Marinobacter lipolyticus sp. nov., a novel moderate halophile with lipolytic activity.	Martin S, Marquez MC, Sanchez-Porro C, Mellado E, Arahal DR, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.02528-0	2003	*

References

#5732

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15157

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23296

S. Martín, M. C. Márquez, C. Sánchez-Porro, E. Mellado, D. R. Arahal, A. Ventosa: Marinobacter lipolyticus sp. nov., a novel moderate halophile with lipolytic activity. IJSEM 53: 1383 - 1387 2003 ( DOI 10.1099/ijs.0.02528-0 , PubMed 13130022 )

#36164 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#70157

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID127997.1 )

#120621 Collection of Institut Pasteur ; Curators of the CIP; CIP 107627
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Marinobacter lipolyticus in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Marinobacter lipolyticus SM19 SM19

Change proposal

Change proposal