[Ref.: #1782] |
Sample type/isolated from |
human throat |
[Ref.: #1782] |
Country |
Canada |
[Ref.: #1782] |
Country ISO 3 Code |
CAN |
[Ref.: #1782] |
Continent |
North America |
|
[Ref.: #45681] |
Sample type/isolated from |
Human throat |
[Ref.: #45681] |
Sampling date |
1976 |
[Ref.: #45681] |
Country |
Canada |
[Ref.: #45681] |
Country ISO 3 Code |
CAN |
[Ref.: #45681] |
Continent |
North America |
|
[Ref.: #67770] |
Sample type/isolated from |
Throat |
[Ref.: #67770] |
Country |
Canada |
[Ref.: #67770] |
Country ISO 3 Code |
CAN |
[Ref.: #67770] |
Continent |
North America |
|
[Ref.: #120558] |
Sample type/isolated from |
Human, Throat |
[Ref.: #120558] |
Country |
Canada |
[Ref.: #120558] |
Country ISO 3 Code |
CAN |
[Ref.: #120558] |
Continent |
North America |
[Ref.: #120558] |
Isolation date |
1976 |
* marker position based on {}
|
|
Isolation sources categories |
#Host |
#Human |
- |
#Host Body-Site |
#Oral cavity and airways |
#Throat |
|
|
-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Cedecea lapagei gene for 16S ribosomal RNA, partial sequence, strain: JCM 1684, clone: 1 |
LC036260 |
1464 |
|
158823 tax ID |
[Ref.: #67770] |
Cedecea lapagei gene for 16S ribosomal RNA, partial sequence, strain: JCM 1684, clone: 2 |
LC036261 |
1462 |
|
158823 tax ID |
[Ref.: #67770] |
Cedecea lapagei gene for 16S ribosomal RNA, partial sequence, strain: JCM 1684, clone: 3 |
LC036262 |
1462 |
|
158823 tax ID |
[Ref.: #124043] |
Cedecea lapagei partial 16S rRNA gene, type strain DSM 4587T, isolate Clone 1 |
LM999762 |
1532 |
|
158823 tax ID |
* |
[Ref.: #124043] |
Cedecea lapagei partial 16S rRNA gene, type strain DSM 4587T, isolate Clone 2 |
LM999763 |
1531 |
|
158823 tax ID |
* |
[Ref.: #124043] |
Cedecea lapagei partial 16S rRNA gene, type strain DSM 4587T, isolate Clone 3 |
LM999764 |
1531 |
|
158823 tax ID |
* |
|
|
Genome sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Cedecea lapagei NCTC11466 |
GCA_900635955 |
complete |
|
158823 tax ID |
* |
[Ref.: #66792] |
Cedecea lapagei strain NCTC11466 |
158823.5 |
complete |
|
158823 tax ID |
* |
[Ref.: #66792] |
Cedecea lapagei NCTC11466 |
2836746200 |
complete |
|
158823 tax ID |
* |
|
[Ref.: #67770] |
GC-content |
47.2-49 mol% |
thermal denaturation, midpoint method (Tm) |
|
-
Availability in culture collections External links
- References
-
#1782 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 4587
|
-
-
#38418 |
; Curators of the CIP;
|
-
#45681 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 12371
|
-
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68368 |
Automatically annotated from API 20E .
|
-
#68371 |
Automatically annotated from API 50CH acid .
|
-
#68374 |
Automatically annotated from API ID32E .
|
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
-
-
#73813 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID13608.1 )
|
-
#120558 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 80.35
|
-
#124043 |
Dr. Isabel Schober, Dr. Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
|
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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