Name: Fundidesulfovibrio butyratiphilus BSY
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 4170

Type strain:

Species: Fundidesulfovibrio butyratiphilus

Strain Designation: BSY

Culture col. no.: DSM 21556, JCM 15519

Strain history: A. Ueki strain BSY.

NCBI tax ID(s): 442866 (species)

SI-ID 398940

DSM 21556

Special Collections

Section

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Fundidesulfovibrio butyratiphilus BSY is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from anaerobic municipal sewage sludge digester.

Gram-negative
motile
rod-shaped
anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfovibrionales*
	Family	*Desulfovibrionaceae*
	Genus	*Fundidesulfovibrio*
	Species	**Fundidesulfovibrio butyratiphilus**
	Full Scientific Name (LPSN)	Fundidesulfovibrio butyratiphilus (Suzuki et al. 2010) Galushko and Kuever 2021

Synonym

Desulfovibrio butyratiphilus

Information on morphological and physiological properties Morphology

[Ref.: #23217]	Gram stain	negative

[Ref.: #23217]	Cell length	2.4-5.6 µm

[Ref.: #23217]	Cell width	0.8-0.9 µm

[Ref.: #23217]	Cell shape	rod-shaped

[Ref.: #23217]	Motility	yes

[Ref.: #23217]	Flagellum arrangement	polar

[Ref.: #23217]	Colony color	greyish

[Ref.: #15794]	Incubation period	3-7 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15794]

Culture medium

DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194)

[Ref.: #15794]

Culture medium growth

[Ref.: #15794]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15794]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #15794]	growth	30 °C
[Ref.: #23217]	growth	25-40 °C
[Ref.: #23217]	optimum	35 °C
[Ref.: #67770]	growth	30 °C

	pH	Kind of pH		pH
[Ref.: #23217]			optimum	7.1
[Ref.: #23217]			growth	6.2-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #15794]	Oxygen tolerance	anaerobe
[Ref.: #23217]	Oxygen tolerance	anaerobe

[Ref.: #23217]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #23217]		NaCl		growth	0-2.0	%(w/v)
[Ref.: #23217]		NaCl		optimum	0.5	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-6(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23217]	butyrate ChEBI	+	electron donor
[Ref.: #23217]	formate ChEBI	-	electron donor
[Ref.: #23217]	fumarate ChEBI	-	electron acceptor
[Ref.: #23217]	fumarate ChEBI	-	electron donor
[Ref.: #23217]	malate ChEBI	-	electron donor
[Ref.: #23217]	nitrate ChEBI	-	electron acceptor
[Ref.: #23217]	propanol ChEBI	+	electron donor
[Ref.: #23217]	succinate ChEBI	-	electron donor
[Ref.: #23217]	sulfate ChEBI	+	electron acceptor
[Ref.: #23217]	sulfate ChEBI	+	reduction
[Ref.: #23217]	sulfite ChEBI	-	electron acceptor
[Ref.: #23217]	thiosulfate ChEBI	+	electron acceptor
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #23217]		catalase	-	1.11.1.6
[Ref.: #23217]		cytochrome oxidase	-	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15794]	Sample type/isolated from	anaerobic municipal sewage sludge digester
[Ref.: #15794]	Geographic location (country and/or sea, region)	Yokohama
[Ref.: #15794]	Country	Japan
[Ref.: #15794]	Country ISO 3 Code	JPN
[Ref.: #15794]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Anaerobic sewage sludge digester in Yokohama
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Biodegradation	#Anaerobic digestor
#Engineered	#Waste	#Sewage sludge
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15794]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15794]	Desulfovibrio butyratiphilus gene for 16S ribosomal RNA, partial sequence, strain: BSY	AB303305	1450	GenBank ENA	442866 tax ID
[Ref.: #67770]	Desulfovibrio butyratiphilus gene for 16S ribosomal RNA, partial sequence, strain: BST	AB303302	1286	GenBank ENA	442866 tax ID

[Ref.: #15794]

GC-content

63.3 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #15794]

Culture collection no.

DSM 21556, JCM 15519

[Ref.: #73672]

SI-ID 398940

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Desulfovibrio butyratiphilus sp. nov., a Gram-negative, butyrate-oxidizing, sulfate-reducing bacterium isolated from an anaerobic municipal sewage sludge digester.	Suzuki D, Ueki A, Shizuku T, Ohtaki Y, Ueki K	Int J Syst Evol Microbiol	10.1099/ijs.0.013771-0	2009	*

References

#15794

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21556

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23217

Daisuke Suzuki, Atsuko Ueki, Toshiko Shizuku, Yoshimi Ohtaki, Katsuji Ueki: Desulfovibrio butyratiphilus sp. nov., a Gram-negative, butyrate-oxidizing, sulfate-reducing bacterium isolated from an anaerobic municipal sewage sludge digester. IJSEM 60: 595 - 602 2010 ( DOI 10.1099/ijs.0.013771-0 , PubMed 19654341 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#73672

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398940.1 )

* These data were automatically processed and therefore are not curated

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