Fundidesulfovibrio butyratiphilus (DSM 21556, JCM 15519, BSY)

Name: Fundidesulfovibrio butyratiphilus (DSM 21556, JCM 15519, BSY)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4170

Type strain

Strain Designation BSY

Culture col. no. DSM 21556 JCM 15519 BSY

NCBI tax ID(s) 442866

Special Collections DSMZ JCM Literature strains

History <- A. Ueki, Yamagata Univ., Tsuruoka, Japan; BSY <- A. Ueki; {1998} A. Ueki strain BSY.

Links

Fundidesulfovibrio butyratiphilus BSY is an anaerobe, mesophilic, Gram-negative prokaryote that was isolated from anaerobic municipal sewage sludge digester.

Gram-negative motile rod-shaped anaerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 398940

JCM 15519,DSM 21556

@ref 20215

Last LPSN update 2026-02-09 11:18:39

Domain Bacteria

Phylum Thermodesulfobacteriota

Class Desulfovibrionia

Order Desulfovibrionales

Family Desulfovibrionaceae

Genus Fundidesulfovibrio

Species Fundidesulfovibrio butyratiphilus

Full scientific name Fundidesulfovibrio butyratiphilus (Suzuki et al. 2010) Galushko and Kuever 2021

Synonyms (1)

Desulfovibrio butyratiphilus

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Flagellum arrangement
23217	negative	2.4-5.6 µm	0.8-0.9 µm	rod-shaped		polar

Colony morphology

@ref	Incubation period	Colony color
15794	3-7 days
23217		greyish

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
15794	DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194)		Medium recipe at MediaDive	Name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194; with strain-specific modifications) Composition: Na2SO4 2.99103 g/l Na2CO3 1.49551 g/l Na-butyrate 0.997009 g/l NaCl 0.997009 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l MgCl2 x 6 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
15794	positive	growth	30	mesophilic
23217	positive	growth	25-40
23217	positive	optimum	35	mesophilic
67770	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH
23217	positive	optimum	7.1
23217	positive	growth	6.2-8.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
15794	anaerobe
23217	anaerobe

Spore formation

23217

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
23217	NaCl	positive	growth	0-2.0 %(w/v)
23217	NaCl	positive	optimum	0.5 %(w/v)

Observation

67770

Observationquinones: MK-6(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23217	17968 ChEBI	butyrate	+	electron donor
23217	15740 ChEBI	formate	-	electron donor
23217	29806 ChEBI	fumarate	-	electron acceptor
23217	29806 ChEBI	fumarate	-	electron donor
23217	25115 ChEBI	malate	-	electron donor
23217	17632 ChEBI	nitrate	-	electron acceptor
23217	28831 ChEBI	propanol	+	electron donor
23217	30031 ChEBI	succinate	-	electron donor
23217	16189 ChEBI	sulfate	+	electron acceptor
23217	16189 ChEBI	sulfate	+	reduction
23217	17359 ChEBI	sulfite	-	electron acceptor
23217	16094 ChEBI	thiosulfate	+	electron acceptor

Enzymes

@ref	Value	Activity	Ec
23217	catalase	-	1.11.1.6
23217	cytochrome oxidase	-	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Biodegradation	#Anaerobic digestor
#Engineered	#Waste	#Sewage sludge
#Condition	#Anoxic (anaerobic)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
15794	anaerobic municipal sewage sludge digester	Yokohama	Japan	JPN	Asia
67770	Anaerobic sewage sludge digester in Yokohama		Japan	JPN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
15794	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
15794	Desulfovibrio butyratiphilus gene for 16S ribosomal RNA, partial sequence, strain: BSY	AB303305	1450		442866
67770	Desulfovibrio butyratiphilus gene for 16S ribosomal RNA, partial sequence, strain: BST	AB303302	1286		442866

GC content

@ref	GC-content (mol%)	Method
15794	63.3	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Desulfovibrio butyratiphilus sp. nov., a Gram-negative, butyrate-oxidizing, sulfate-reducing bacterium isolated from an anaerobic municipal sewage sludge digester.	Suzuki D, Ueki A, Shizuku T, Ohtaki Y, Ueki K	Int J Syst Evol Microbiol	10.1099/ijs.0.013771-0	2009

References

#15794	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21556
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23217	Daisuke Suzuki, Atsuko Ueki, Toshiko Shizuku, Yoshimi Ohtaki, Katsuji Ueki: Desulfovibrio butyratiphilus sp. nov., a Gram-negative, butyrate-oxidizing, sulfate-reducing bacterium isolated from an anaerobic municipal sewage sludge digester. IJSEM 60: 595 - 602 2010 ( DOI 10.1099/ijs.0.013771-0 , PubMed 19654341 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Fundidesulfovibrio butyratiphilus (DSM 21556, JCM 15519, BSY)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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