Branchiibius cervicis (DSM 24166, NRBC 106593, PAGU 1247)

Name: Branchiibius cervicis (DSM 24166, NRBC 106593, PAGU 1247)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3933

Type strain

Culture col. no. DSM 24166 NRBC 106593 PAGU 1247

NCBI tax ID(s) 908252

Special Collections DSMZ

History DSMZ <- J. Tomida, Aichi Gakuin University, Dept. of Microbiology, Nagoya,Japan; PAGU 1247 <- Meiji Pharmaceutical University, Tokyo, Japan

Links

Branchiibius cervicis DSM 24166 is a bacterium that was isolated from skin of atopic dermatitis patient.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 403469

NBRC 106593,DSM 24166

@ref 20215

Last LPSN update 2026-05-29 08:25:49

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Dermacoccaceae

Genus Branchiibius

Species Branchiibius cervicis

Full scientific name Branchiibius cervicis Tomida et al. 2013

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
17522	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
17522	positive	growth	28

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Inflammation	-
#Infection	#Patient	-
#Host Body-Site	#Organ	#Skin, Nail, Hair

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
17522	skin of atopic dermatitis patient	Homo sapiens	Saitama	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB594446 (>99% sequence identity) for Branchiibius from Microbeatlas

Aquatic Samples	355
Soil Samples	151
Animal Samples	1282
Plant Samples	55
Total Samples	1843

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
17522	yes, in single cases	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
17522	Branchiibius cervicis gene for 16S ribosomal RNA, partial sequence, strain: PAGU 1247	AB594446	1397		908252

GC content

@ref	GC-content (mol%)	Method
17522	67.6	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Leekyejoonella antrihumi gen. nov., sp. nov., a new member of the family Dermacoccaceae isolated from a cave soil.	Lee SD, Kim IS, Schumann P, Song G.	Int J Syst Evol Microbiol	10.1099/ijsem.0.004177	2020
Phylogeny	Branchiibius cervicis sp. nov., a novel species isolated from patients with atopic dermatitis.	Tomida J, Sakamoto D, Sugita T, Fujiwara N, Naka T, Hamada M, Morita Y, Kawamura Y	Syst Appl Microbiol	10.1016/j.syapm.2011.08.003	2011

References

#17522	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24166
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Branchiibius cervicis (DSM 24166, NRBC 106593, PAGU 1247)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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