Bordetella bronchiseptica B-140 is an aerobe, Gram-negative, rod-shaped human pathogen of the family Alcaligenaceae.
Gram-negative rod-shaped aerobe human pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Burkholderiales |
| Family Alcaligenaceae |
| Genus Bordetella |
| Species Bordetella bronchiseptica |
| Full scientific name Bordetella bronchiseptica (Ferry 1912) Moreno-López 1952 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 34207 | MEDIUM 440 - for Bordetella | Distilled water make up to (1000.000 ml);Glycerol (10.000 ml);Bordet gengou agar (30.000 g);Sheep blood (200.000 ml) | |||
| 3892 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 3892 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 117058 | CIP Medium 440 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 96.6 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | + | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 117058 | 16947 ChEBI | citrate | + | carbon source | |
| 68377 | 15824 ChEBI | D-fructose | - | builds acid from | from API NH |
| 68377 | 17634 ChEBI | D-glucose | - | builds acid from | from API NH |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 117058 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 117058 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 117058 | 15792 ChEBI | malonate | - | assimilation | |
| 68377 | 17306 ChEBI | maltose | - | builds acid from | from API NH |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 117058 | 17632 ChEBI | nitrate | - | builds gas from | |
| 117058 | 17632 ChEBI | nitrate | + | reduction | |
| 117058 | 17632 ChEBI | nitrate | - | respiration | |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 117058 | 16301 ChEBI | nitrite | - | builds gas from | |
| 117058 | 16301 ChEBI | nitrite | - | reduction | |
| 68377 | 17992 ChEBI | sucrose | - | builds acid from | from API NH |
| 117058 | 35020 ChEBI | tributyrin | - | hydrolysis | |
| 68377 | 27897 ChEBI | tryptophan | - | energy source | from API NH |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | + | hydrolysis | from API 20NE |
| 68377 | 16199 ChEBI | urea | + | hydrolysis | from API NH |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 117058 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 117058 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68377 | alkaline phosphatase | - | 3.1.3.1 | from API NH |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 117058 | amylase | - | ||
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 117058 | beta-galactosidase | - | 3.2.1.23 | |
| 68377 | beta-galactosidase | - | 3.2.1.23 | from API NH |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68377 | beta-lactamase | - | 3.5.2.6 | from API NH |
| 117058 | caseinase | - | 3.4.21.50 | |
| 3892 | catalase | + | 1.11.1.6 | |
| 117058 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68369 | cytochrome oxidase | + | 1.9.3.1 | from API 20NE |
| 3892 | cytochrome-c oxidase | + | 1.9.3.1 | |
| 117058 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 117058 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 117058 | gelatinase | - | ||
| 68369 | gelatinase | - | from API 20NE | |
| 117058 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 117058 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 117058 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 117058 | ornithine decarboxylase | - | 4.1.1.17 | |
| 117058 | oxidase | + | ||
| 117058 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 117058 | protease | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 117058 | tryptophan deaminase | - | ||
| 68377 | tryptophan deaminase | - | 4.1.99.1 | from API NH |
| 117058 | tween esterase | - | ||
| 117058 | urease | + | 3.5.1.5 | |
| 68377 | urease | + | 3.5.1.5 | from API NH |
| 68369 | urease | + | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | - | from API zym |
Global distribution of 16S sequence AJ278452 (>99% sequence identity) for Bordetella pertussis from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | 54466_G01 assembly for Bordetella bronchiseptica NCTC8344 | complete | 518 | 99.68 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 3892 | Bordetella bronchiseptica partial 16S rRNA gene, strain DSM 10303 | AJ278452 | 1523 | 518 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 96.60 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 83.90 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 97.50 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 96.90 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 96.48 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.22 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 86.63 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 89.01 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.07 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 85.77 | no |
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| Disubstituted 4-Chloro-3-nitrophenylthiourea Derivatives: Antimicrobial and Cytotoxic Studies. | Bielenica A, Sanna G, Madeddu S, Giliberti G, Stefanska J, Koziol AE, Savchenko O, Strzyga-Lach P, Chrzanowska A, Kubiak-Tomaszewska G, Struga M. | Molecules | 10.3390/molecules23102428 | 2018 | ||
| Synthesis, Structural Studies and Biological Evaluation of Connections of Thiosemicarbazide, 1,2,4-Triazole and 1,3,4-Thiadiazole with Palmitic Acid. | Jozwiak M, Stepien K, Wrzosek M, Olejarz W, Kubiak-Tomaszewska G, Filipowska A, Filipowski W, Struga M. | Molecules | 10.3390/molecules23040822 | 2018 | ||
| Pathogenicity | Synthesis and Biological Evaluation of Novel Indole-Derived Thioureas. | Sanna G, Madeddu S, Giliberti G, Piras S, Struga M, Wrzosek M, Kubiak-Tomaszewska G, Koziol AE, Savchenko O, Lis T, Stefanska J, Tomaszewski P, Skrzycki M, Szulczyk D. | Molecules | 10.3390/molecules23102554 | 2018 | |
| Pathogenicity | 1,4-Disubstituted thiosemicarbazide derivatives are potent inhibitors of Toxoplasma gondii proliferation. | Dzitko K, Paneth A, Plech T, Pawelczyk J, Staczek P, Stefanska J, Paneth P. | Molecules | 10.3390/molecules19079926 | 2014 | |
| Bordetella parapertussis and Bordetella bronchiseptica contain transcriptionally silent pertussis toxin genes. | Arico B, Rappuoli R. | J Bacteriol | 10.1128/jb.169.6.2847-2853.1987 | 1987 | ||
| Appraisal of phytochemical and in vitro biological attributes of an unexplored folklore: Rhus Punjabensis Stewart. | Tabassum S, Ahmed M, Mirza B, Naeem M, Zia M, Shanwari ZK, Khan GM. | BMC Complement Altern Med | 10.1186/s12906-017-1659-6 | 2017 | ||
| Pathogenicity | In vivo pharmacokinetics/pharmacodynamics of colistin and imipenem in Pseudomonas aeruginosa biofilm infection. | Hengzhuang W, Wu H, Ciofu O, Song Z, Hoiby N. | Antimicrob Agents Chemother | 10.1128/aac.06486-11 | 2012 | |
| Pathogenicity | Demonstration of R factors in Bordetella bronchiseptica isolated from pigs. | Terakado N, Azechi H, Ninomiya K, Shimizu T. | Antimicrob Agents Chemother | 10.1128/aac.3.5.555 | 1973 | |
| Enzymology | Validation of nested Bordetella PCR in pertussis vaccine trial. | Reizenstein E, Lindberg L, Mollby R, Hallander HO. | J Clin Microbiol | 10.1128/jcm.34.4.810-815.1996 | 1996 | |
| Phylogeny | Differentiation of Bordetella avium and related species by cellular fatty acid analysis. | Moore CJ, Mawhinney H, Blackall PJ. | J Clin Microbiol | 10.1128/jcm.25.6.1059-1062.1987 | 1987 | |
| Pathogenicity | Efficacy of rifampin and its combinations with imipenem, sulbactam, and colistin in experimental models of infection caused by imipenem-resistant Acinetobacter baumannii. | Pachon-Ibanez ME, Docobo-Perez F, Lopez-Rojas R, Dominguez-Herrera J, Jimenez-Mejias ME, Garcia-Curiel A, Pichardo C, Jimenez L, Pachon J. | Antimicrob Agents Chemother | 10.1128/aac.00367-09 | 2010 | |
| Evolutionary trees for the genus Bordetella. | Altschul SF. | J Bacteriol | 10.1128/jb.171.2.1211-1213.1989 | 1989 | ||
| Promoter of the pertussis toxin operon and production of pertussis toxin. | Nicosia A, Rappuoli R. | J Bacteriol | 10.1128/jb.169.6.2843-2846.1987 | 1987 | ||
| Pathogenicity | Design of antimicrobially active small amphiphilic peptide dendrimers. | Polcyn P, Jurczak M, Rajnisz A, Solecka J, Urbanczyk-Lipkowska Z. | Molecules | 10.3390/molecules14103881 | 2009 | |
| The international standard for colistin. | Lightbown JW, Bond JM, Grab B. | Bull World Health Organ | 1973 | |||
| Microbioassay of antimicrobial agents. | Simon HJ, Yin EJ. | Appl Microbiol | 10.1128/am.19.4.573-579.1970 | 1970 | ||
| Detection of Mycoplasma hyopneumoniae by using rRNA-oligodeoxynucleotide hybridization. | Futo S, Seto Y, Mitsuse S, Mori Y. | J Clin Microbiol | 10.1128/jcm.30.6.1509-1513.1992 | 1992 | ||
| The international reference preparation of colistin methane sulfonate. | Lightbown JW, Bond JM, Grab B. | Bull World Health Organ | 1973 | |||
| Selective filtration of antibiotics through collodion membranes. | Barza M, Bergeron MG, Brusch J, Weinstein L. | Antimicrob Agents Chemother | 10.1128/aac.4.3.337 | 1973 | ||
| Colistin sulphomethate sodium administration in the presence of severe renal failure and during haemodialysis and peritoneal dialysis. | Curitis JR, Eastwood JB. | Br Med J | 10.1136/bmj.1.5590.484 | 1968 | ||
| Stability of antibiotics and amino acids in two synthetic L-amino acid solutions commonly used for total parenteral nutrition in children. | Colding H, Andersen GE. | Antimicrob Agents Chemother | 10.1128/aac.13.4.555 | 1978 | ||
| Metabolism | Nucleic acid enzyme studies of nonfermentative gram-negative bacteria using thin-layer chromatography. | Klein MM, Blazevic DJ. | Appl Microbiol | 10.1128/am.23.2.276-280.1972 | 1972 | |
| Specific assay of aminoglycosidic- or polymyxin-type antibiotics present in human sera in combination with cephalosporins. | Stroy SA, Preston DA. | Appl Microbiol | 10.1128/am.21.6.1002-1006.1971 | 1971 | ||
| Stability of antibiotics and chemotherapeutics in agar plates. | Ryan KJ, Needham GM, Dunsmoor CL, Sherris JC. | Appl Microbiol | 10.1128/am.20.3.447-451.1970 | 1970 | ||
| Simplified, accurate method for antibiotic assay of clinical specimens. | Bennett JV, Brodie JL, Benner EJ, Kirby WM. | Appl Microbiol | 10.1128/am.14.2.170-177.1966 | 1966 | ||
| Biological characterization of prasinomycin, a phosphorus-containing antibiotic. | Meyers E, Miraglia GJ, Smith DA, Basch HI, Pansy FE, Trejo WH, Donovick R. | Appl Microbiol | 10.1128/am.16.4.603-608.1968 | 1968 | ||
| Pathogenicity | Comparative study of the effect of three antibiotics on renal function. | Caldwell AD, Martin AJ, Trigger DJ. | Br J Pharmacol | 10.1111/j.1476-5381.1969.tb09545.x | 1969 | |
| Sodium sulphomethyl derivatives of polymyxins. | Beveridge EG, Martin AJ. | Br J Pharmacol Chemother | 10.1111/j.1476-5381.1967.tb01946.x | 1967 | ||
| Synergistic effect of Bordetella pertussis lymphocytosis-promoting factor on protective activities of isolated Bordetella antigens in mice. | Robinson A, Irons LI. | Infect Immun | 10.1128/iai.40.2.523-528.1983 | 1983 | ||
| Analysis of a repetitive DNA sequence from Bordetella pertussis and its application to the diagnosis of pertussis using the polymerase chain reaction. | Glare EM, Paton JC, Premier RR, Lawrence AJ, Nisbet IT. | J Clin Microbiol | 10.1128/jcm.28.9.1982-1987.1990 | 1990 | ||
| Structure and biological properties of solubilized envelope proteins of Bordetella pertussis. | Robinson A, Hawkins DC. | Infect Immun | 10.1128/iai.39.2.590-598.1983 | 1983 | ||
| Effectiveness of one and two doses of acellular pertussis vaccines against laboratory-confirmed pertussis requiring hospitalisation in infants: Results of the PERTINENT sentinel surveillance system in six EU/EEA countries, December 2015 - December 2019. | Merdrignac L, Ait El Belghiti F, Pandolfi E, Acosta L, Fabianova K, Habington A, Garcia Cenoz M, Boas H, Toubiana J, Tozzi AE, Jordan I, Zavadilova J, O'Sullivan N, Navascues A, Flem E, Croci I, Jane M, Krizova P, Cotter S, Fernandino L, Bekkevold T, Munoz-Almagro C, Bacci S, Kramarz P, Kissling E, Savulescu C, Renacoq Group, PERTINENT Group. | Vaccine | 10.1016/j.vaccine.2024.02.090 | 2024 | ||
| Pathogenicity | Synthesis, Characterization, Biological Evaluation and DNA Interaction Studies of 4-Aminophenol Derivatives: Theoretical and Experimental Approach. | Rafique B, Kalsoom S, Sajini AA, Ismail H, Iqbal M | Molecules | 10.3390/molecules27041352 | 2022 | |
| Occurence of Bordetella bronchiseptica in domestic cats with upper respiratory tract infections. | Garbal M, Adaszek L, Lyp P, Frymus J, Winiarczyk M, Winiarczyk S | Pol J Vet Sci | 10.1515/pjvs-2016-0043 | 2016 | ||
| Genetics | Molecular characterization of two Bordetella bronchiseptica strains isolated from children with coughs. | Stefanelli P, Mastrantonio P, Hausman SZ, Giuliano M, Burns DL | J Clin Microbiol | 10.1128/jcm.35.6.1550-1555.1997 | 1997 | |
| Enzymology | Residue determination of two co-administered antibacterial agents--cephalexin and colistin--in calf tissues using high-performance liquid chromatography and microbiological methods. | Leroy P, Decolin D, Nicolas S, Archimbault P, Nicolas A | J Pharm Biomed Anal | 10.1016/0731-7085(89)80201-8 | 1989 | |
| Pathogenicity | Flow microcalorimetric assay of antibiotics--I. Polymyxin B sulphate and its combinations with neomycin sulphate and zinc bacitracin on interaction with Bordetella bronchiseptica (NCTC 8344). | Joslin Kjeldsen N, Beezer AE, Miles RJ | J Pharm Biomed Anal | 10.1016/0731-7085(89)80005-6 | 1989 |
| #3892 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10303 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #34207 | ; Curators of the CIP; |
| #44557 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2514 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68369 | Automatically annotated from API 20NE . |
| #68377 | Automatically annotated from API NH . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #117058 | Collection of Institut Pasteur ; Curators of the CIP; CIP 53.157 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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