Archangium gephyra M18 is a bacterium that was isolated from soil.
genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Deltaproteobacteria |
| Order Myxococcales |
| Family Archangiaceae |
| Genus Archangium |
| Species Archangium gephyra |
| Full scientific name Archangium gephyra Jahn 1924 (Approved Lists 1980) |
| @ref | Gram stain | Confidence | |
|---|---|---|---|
| 125438 | negative | 93.476 |
| @ref: | 1009 |
| multimedia content: | DSM_2261.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_2261.jpg |
| caption: | myxospores formed in fruiting bodies on agar medium 9 |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 1009 | CY/H MEDIUM FOR MYXOBACTERIA (DSMZ Medium 1542) | Medium recipe at MediaDive | Name: CY/H LIQUID MEDIUM FOR MYXOBACTERIA (DSMZ Medium 1542) Composition: HEPES 11.9 g/l Starch 4.0 g/l Yeast extract 1.5 g/l Casitone 1.5 g/l CaCl2 x 2 H2O 1.0 g/l D-Glucose 1.0 g/l Soy flour 1.0 g/l MgSO4 x 7 H2O 0.5 g/l Fe(III)-EDTA 0.008 g/l Vitamin B12 0.0005 g/l Distilled water | ||
| 1009 | VY/2 AGAR (DSMZ Medium 9) | Medium recipe at MediaDive | Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water | ||
| 1009 | SP - MEDIUM (DSMZ Medium 222) | Medium recipe at MediaDive | Name: SP - MEDIUM (DSMZ Medium 222) Composition: Agar 15.0 g/l Starch 5.0 g/l Casitone 2.5 g/l Galactose 1.0 g/l Sucrose 1.0 g/l Raffinose 1.0 g/l MgSO4 x 7 H2O 0.5 g/l K2HPO4 0.25 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 1009 | positive | growth | 30 |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | facultative anaerobe | 91.6 |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68382 | valine arylamidase | + | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | CMP-KDO biosynthesis | 100 | 4 of 4 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | glycine betaine biosynthesis | 100 | 5 of 5 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | lactate fermentation | 100 | 4 of 4 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | ||
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | propionate fermentation | 90 | 9 of 10 | ||
| 66794 | molybdenum cofactor biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | ||
| 66794 | NAD metabolism | 88.89 | 16 of 18 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | ketogluconate metabolism | 87.5 | 7 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | citric acid cycle | 85.71 | 12 of 14 | ||
| 66794 | propanol degradation | 85.71 | 6 of 7 | ||
| 66794 | tetrahydrofolate metabolism | 85.71 | 12 of 14 | ||
| 66794 | glutamate and glutamine metabolism | 85.71 | 24 of 28 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | purine metabolism | 85.11 | 80 of 94 | ||
| 66794 | vitamin B1 metabolism | 84.62 | 11 of 13 | ||
| 66794 | urea cycle | 84.62 | 11 of 13 | ||
| 66794 | phenylalanine metabolism | 84.62 | 11 of 13 | ||
| 66794 | tryptophan metabolism | 84.21 | 32 of 38 | ||
| 66794 | selenocysteine biosynthesis | 83.33 | 5 of 6 | ||
| 66794 | sphingosine metabolism | 83.33 | 5 of 6 | ||
| 66794 | glycolysis | 82.35 | 14 of 17 | ||
| 66794 | vitamin B6 metabolism | 81.82 | 9 of 11 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | methionine metabolism | 80.77 | 21 of 26 | ||
| 66794 | phenylacetate degradation (aerobic) | 80 | 4 of 5 | ||
| 66794 | ethylmalonyl-CoA pathway | 80 | 4 of 5 | ||
| 66794 | flavin biosynthesis | 80 | 12 of 15 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | 3-chlorocatechol degradation | 80 | 4 of 5 | ||
| 66794 | glutathione metabolism | 78.57 | 11 of 14 | ||
| 66794 | tyrosine metabolism | 78.57 | 11 of 14 | ||
| 66794 | valine metabolism | 77.78 | 7 of 9 | ||
| 66794 | leucine metabolism | 76.92 | 10 of 13 | ||
| 66794 | alanine metabolism | 75.86 | 22 of 29 | ||
| 66794 | pyrimidine metabolism | 75.56 | 34 of 45 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | dTDPLrhamnose biosynthesis | 75 | 6 of 8 | ||
| 66794 | proline metabolism | 72.73 | 8 of 11 | ||
| 66794 | ubiquinone biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | arginine metabolism | 70.83 | 17 of 24 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 70 | 7 of 10 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 69.23 | 9 of 13 | ||
| 66794 | sulfate reduction | 69.23 | 9 of 13 | ||
| 66794 | histidine metabolism | 68.97 | 20 of 29 | ||
| 66794 | non-pathway related | 68.42 | 26 of 38 | ||
| 66794 | lipid metabolism | 67.74 | 21 of 31 | ||
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | lysine metabolism | 66.67 | 28 of 42 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 66.67 | 8 of 12 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | IAA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | arachidonic acid metabolism | 66.67 | 12 of 18 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | phenol degradation | 65 | 13 of 20 | ||
| 66794 | oxidative phosphorylation | 63.74 | 58 of 91 | ||
| 66794 | cholesterol biosynthesis | 63.64 | 7 of 11 | ||
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | ||
| 66794 | androgen and estrogen metabolism | 62.5 | 10 of 16 | ||
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | ||
| 66794 | cysteine metabolism | 61.11 | 11 of 18 | ||
| 66794 | hydrogen production | 60 | 3 of 5 | ||
| 66794 | factor 420 biosynthesis | 60 | 3 of 5 | ||
| 66794 | glycine metabolism | 60 | 6 of 10 | ||
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | ||
| 66794 | gallate degradation | 60 | 3 of 5 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | carotenoid biosynthesis | 59.09 | 13 of 22 | ||
| 66794 | isoprenoid biosynthesis | 57.69 | 15 of 26 | ||
| 66794 | d-xylose degradation | 54.55 | 6 of 11 | ||
| 66794 | 3-phenylpropionate degradation | 53.33 | 8 of 15 | ||
| 66794 | polyamine pathway | 52.17 | 12 of 23 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | cyclohexanol degradation | 50 | 2 of 4 | ||
| 66794 | carnitine metabolism | 50 | 4 of 8 | ||
| 66794 | dolichol and dolichyl phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | glycolate and glyoxylate degradation | 50 | 3 of 6 | ||
| 66794 | grixazone biosynthesis | 50 | 1 of 2 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | catecholamine biosynthesis | 50 | 2 of 4 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | Entner Doudoroff pathway | 50 | 5 of 10 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | diterpene phytoalexins precursors biosynthesis | 43.75 | 7 of 16 | ||
| 66794 | benzoyl-CoA degradation | 42.86 | 3 of 7 | ||
| 66794 | mevalonate metabolism | 42.86 | 3 of 7 | ||
| 66794 | ascorbate metabolism | 40.91 | 9 of 22 | ||
| 66794 | D-cycloserine biosynthesis | 40 | 2 of 5 | ||
| 66794 | coenzyme M biosynthesis | 40 | 4 of 10 | ||
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | myo-inositol biosynthesis | 40 | 4 of 10 | ||
| 66794 | degradation of hexoses | 38.89 | 7 of 18 | ||
| 66794 | phenylpropanoid biosynthesis | 38.46 | 5 of 13 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 36.36 | 4 of 11 | ||
| 66794 | degradation of pentoses | 35.71 | 10 of 28 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | 4-hydroxymandelate degradation | 33.33 | 3 of 9 | ||
| 66794 | methanogenesis from CO2 | 33.33 | 4 of 12 | ||
| 66794 | allantoin degradation | 33.33 | 3 of 9 | ||
| 66794 | aclacinomycin biosynthesis | 28.57 | 2 of 7 | ||
| 66794 | chlorophyll metabolism | 27.78 | 5 of 18 | ||
| 66794 | vitamin B12 metabolism | 26.47 | 9 of 34 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | vitamin E metabolism | 25 | 1 of 4 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 | ||
| 66794 | degradation of sugar acids | 24 | 6 of 25 | ||
| 66794 | daunorubicin biosynthesis | 22.22 | 2 of 9 |
| @ref | Sample type | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|
| 1009 | soil | Canada | CAN | North America |
Global distribution of 16S sequence AB218222 (>99% sequence identity) for Archangium from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM102728v1 assembly for Archangium gephyra DSM 2261 | complete | 48 | 94.49 | ||||
| 66792 | ASM338709v1 assembly for Archangium gephyra DSM 2261 | scaffold | 48 | 50.57 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Archangium gephyra 16S ribosomal RNA gene, complete sequence | M94273 | 1483 | 48 | ||
| 20218 | Archangium gephyra strain DSM 2261 16S ribosomal RNA gene, partial sequence | GU207872 | 1482 | 48 | ||
| 20218 | Archangium gephyra gene for 16S rRNA, partial sequence, strain: NBRC 100087 | AB218222 | 1461 | 48 | ||
| 20218 | Archangium gephyra gene for 16S-23S rRNA internal transcribed spacer regions, partial sequence, strain: NBRC 100087, A type | AB218256 | 670 | 48 | ||
| 20218 | Archangium gephyra gene for 16S-23S rRNA internal transcribed spacer regions, partial sequence, strain: NBRC 100087, B type | AB218257 | 625 | 48 | ||
| 1009 | Archangium gephyra strain DSM 2261 16S ribosomal RNA gene, partial sequence | DQ768106 | 1491 | 48 |
| 1009 | GC-content (mol%)68.3 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 74.10 | no |
| 125439 | motility | BacteriaNetⓘ | no | 69.60 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 87.80 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 91.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 93.48 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 90.85 | no |
| 125438 | aerobic | aerobicⓘ | yes | 75.37 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 67.97 | no |
| 125438 | thermophilic | thermophileⓘ | no | 92.11 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 65.55 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Comparative genomic insight into the myxobacterial carbohydrate-degrading potential. | Saraf N, Sharma G. | Front Microbiol | 10.3389/fmicb.2025.1550287 | 2025 | |
| Enzymology | Identification of a solo acylhomoserine lactone synthase from the myxobacterium Archangium gephyra. | Albataineh H, Duke M, Misra SK, Sharp JS, Stevens DC. | Sci Rep | 10.1038/s41598-021-82480-1 | 2021 | |
| Complete Genome Sequence of the Fruiting Myxobacterium Melittangium boletus DSM 14713. | Treuner-Lange A, Bruckskotten M, Rupp O, Goesmann A, Sogaard-Andersen L. | Genome Announc | 10.1128/genomea.01262-17 | 2017 | ||
| Whole-Genome Sequence of the Fruiting Myxobacterium Cystobacter fuscus DSM 52655. | Treuner-Lange A, Bruckskotten M, Rupp O, Goesmann A, Sogaard-Andersen L. | Genome Announc | 10.1128/genomea.01196-17 | 2017 | ||
| Molecular and functional characterization of myxobacteria isolated from soil in India. | Kumar S, Yadav AK, Chambel P, Kaur R. | 3 Biotech | 10.1007/s13205-017-0722-9 | 2017 | ||
| Genetics | Characteristics and immune functions of the endogenous CRISPR-Cas systems in myxobacteria. | Hu W-f, Yang J-y, Wang J-j, Yuan S-f, Yue X-j, Zhang Z, Zhang Y-q, Meng J-y, Li Y-z. | mSystems | 10.1128/msystems.01210-23 | 2024 | |
| Approach to analyze the diversity of myxobacteria in soil by semi-nested PCR-denaturing gradient gel electrophoresis (DGGE) based on taxon-specific gene. | Li B, Yao Q, Zhu H. | PLoS One | 10.1371/journal.pone.0108877 | 2014 | ||
| Genetics | Correlation between bacterial G+C content, genome size and the G+C content of associated plasmids and bacteriophages. | Almpanis A, Swain M, Gatherer D, McEwan N. | Microb Genom | 10.1099/mgen.0.000168 | 2018 | |
| Phylogeny | Comparative Genomics of Myxobacterial Chemosensory Systems. | Sharma G, Khatri I, Subramanian S. | J Bacteriol | 10.1128/jb.00620-17 | 2018 | |
| Metabolism | Genetic manipulation and tools in myxobacteria for the exploitation of secondary metabolism. | Yue X, Sheng D, Zhuo L, Li YZ. | Eng Microbiol | 10.1016/j.engmic.2023.100075 | 2023 | |
| Metabolism | Metabolic and Biosynthetic Diversity in Marine Myxobacteria. | Gemperlein K, Zaburannyi N, Garcia R, La Clair JJ, Muller R. | Mar Drugs | 10.3390/md16090314 | 2018 | |
| Phylogeny | Phylogenetic comparison of retron elements among the myxobacteria: evidence for vertical inheritance. | Rice SA, Lampson BC. | J Bacteriol | 10.1128/jb.177.1.37-45.1995 | 1995 | |
| Phylogeny | A phylogenetic analysis of the myxobacteria: basis for their classification. | Shimkets L, Woese CR. | Proc Natl Acad Sci U S A | 10.1073/pnas.89.20.9459 | 1992 | |
| Phylogeny | Unravelling the Complete Genome of Archangium gephyra DSM 2261T and Evolutionary Insights into Myxobacterial Chitinases. | Sharma G, Subramanian S | Genome Biol Evol | 10.1093/gbe/evx066 | 2017 | |
| Phylogeny | Reclassification of Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus as Archangium disciforme comb. nov., Archangium minus comb. nov. and Archangium violaceum comb. nov., unification of the families Archangiaceae and Cystobacteraceae, and emended descriptions of the families Myxococcaceae and Archangiaceae. | Lang E, Schumann P, Tindall BJ, Mohr KI, Sproer C | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000533 | 2015 | |
| Phylogeny | Vitiosangium cumulatum gen. nov., sp. nov. and Vitiosangium subalbum sp. nov., soil myxobacteria, and emended descriptions of the genera Archangium and Angiococcus, and of the family Cystobacteraceae. | Awal RP, Garcia R, Gemperlein K, Wink J, Kunwar B, Parajuli N, Muller R | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001829 | 2017 |
| #1009 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2261 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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