Owenweeksia hongkongensis DSM 17368 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from sea water .
Gram-negative motile rod-shaped colony-forming aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Bacteroidota |
| Class Flavobacteriia |
| Order Flavobacteriales |
| Family Schleiferiaceae |
| Genus Owenweeksia |
| Species Owenweeksia hongkongensis |
| Full scientific name Owenweeksia hongkongensis Lau et al. 2005 |
| @ref | Colony color | Colony shape | |
|---|---|---|---|
| 27583 | orange | circular |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 6838 | YPS MEDIUM (DSMZ Medium 1168) | Medium recipe at MediaDive | Name: YPS MEDIUM (DSMZ Medium 1168) Composition: Sea Salt 25.0 g/l Agar 15.0 g/l Yeast extract 4.0 g/l Peptone 2.0 g/l Distilled water | ||
| 34970 | Marine agar (MA) | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |||
| 119963 | CIP Medium 13 | Medium recipe at CIP |
| 67770 | Observationquinones: MK-6 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 27583 | 2509 ChEBI | agar | - | assimilation | |
| 27583 | 58187 ChEBI | alginate | - | assimilation | |
| 27583 | 27613 ChEBI | amygdalin | - | assimilation | |
| 27583 | 18305 ChEBI | arbutin | - | assimilation | |
| 27583 | casein | - | assimilation | ||
| 27583 | 17057 ChEBI | cellobiose | - | assimilation | |
| 27583 | crab shell chitin | - | assimilation | ||
| 27583 | 17108 ChEBI | D-arabinose | - | assimilation | |
| 27583 | 18333 ChEBI | D-arabitol | - | assimilation | |
| 27583 | 15824 ChEBI | D-fructose | - | assimilation | |
| 27583 | 28847 ChEBI | D-fucose | - | assimilation | |
| 27583 | 12936 ChEBI | D-galactose | - | assimilation | |
| 27583 | 12936 ChEBI | D-galactose | - | fermentation | |
| 27583 | 17634 ChEBI | D-glucose | - | assimilation | |
| 27583 | 62318 ChEBI | D-lyxose | - | assimilation | |
| 27583 | 16899 ChEBI | D-mannitol | - | fermentation | |
| 27583 | 16899 ChEBI | D-mannitol | - | assimilation | |
| 27583 | 16024 ChEBI | D-mannose | - | assimilation | |
| 27583 | 16988 ChEBI | D-ribose | - | assimilation | |
| 27583 | 17924 ChEBI | D-sorbitol | - | assimilation | |
| 27583 | 17924 ChEBI | D-sorbitol | - | fermentation | |
| 27583 | 16443 ChEBI | D-tagatose | - | assimilation | |
| 27583 | 16551 ChEBI | D-trehalose | - | assimilation | |
| 27583 | 65327 ChEBI | D-xylose | - | assimilation | |
| 27583 | 52071 ChEBI | dextran | - | assimilation | |
| 27583 | 52071 ChEBI | dextran | - | fermentation | |
| 27583 | 16991 ChEBI | dna | - | assimilation | |
| 27583 | 17113 ChEBI | erythritol | - | assimilation | |
| 27583 | 4853 ChEBI | esculin | - | assimilation | |
| 27583 | 31605 ChEBI | ferric citrate | - | assimilation | |
| 27583 | 16813 ChEBI | galactitol | - | assimilation | |
| 27583 | 5291 ChEBI | gelatin | + | assimilation | |
| 27583 | 28066 ChEBI | gentiobiose | - | assimilation | |
| 27583 | 17234 ChEBI | glucose | - | assimilation | |
| 27583 | 17234 ChEBI | glucose | - | fermentation | |
| 27583 | 15978 ChEBI | glycerol 3-phosphate | - | assimilation | |
| 27583 | 28087 ChEBI | glycogen | - | assimilation | |
| 27583 | 85249 ChEBI | hydroxyethylcellulose | - | assimilation | |
| 27583 | 30849 ChEBI | L-arabinose | - | assimilation | |
| 27583 | 18403 ChEBI | L-arabitol | - | assimilation | |
| 27583 | 18287 ChEBI | L-fucose | - | assimilation | |
| 27583 | 62345 ChEBI | L-rhamnose | - | assimilation | |
| 27583 | 17266 ChEBI | L-sorbose | - | assimilation | |
| 27583 | 65328 ChEBI | L-xylose | - | assimilation | |
| 27583 | 17716 ChEBI | lactose | - | assimilation | |
| 27583 | 17306 ChEBI | maltose | - | assimilation | |
| 27583 | 17306 ChEBI | maltose | - | fermentation | |
| 27583 | 6731 ChEBI | melezitose | - | assimilation | |
| 27583 | 28053 ChEBI | melibiose | - | assimilation | |
| 27583 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | assimilation | |
| 27583 | 43943 ChEBI | methyl alpha-D-mannoside | - | assimilation | |
| 27583 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | assimilation | |
| 27583 | 17268 ChEBI | myo-inositol | - | assimilation | |
| 27583 | 17268 ChEBI | myo-inositol | - | fermentation | |
| 27583 | 506227 ChEBI | N-acetylglucosamine | - | assimilation | |
| 27583 | 17632 ChEBI | nitrate | - | reduction | |
| 119963 | 17632 ChEBI | nitrate | - | reduction | |
| 119963 | 16301 ChEBI | nitrite | - | reduction | |
| 27583 | 32032 ChEBI | potassium gluconate | - | assimilation | |
| 27583 | 16634 ChEBI | raffinose | - | assimilation | |
| 27583 | 16634 ChEBI | raffinose | - | fermentation | |
| 27583 | 15963 ChEBI | ribitol | - | assimilation | |
| 27583 | 17814 ChEBI | salicin | - | assimilation | |
| 27583 | 28017 ChEBI | starch | - | assimilation | |
| 27583 | 17992 ChEBI | sucrose | - | assimilation | |
| 27583 | 17992 ChEBI | sucrose | - | fermentation | |
| 27583 | 32528 ChEBI | turanose | - | assimilation | |
| 31262 | 53424 ChEBI | tween 20 | + | carbon source | |
| 27583 | 53424 ChEBI | tween 20 | + | assimilation | |
| 27583 | 17151 ChEBI | xylitol | - | assimilation |
| @ref | ChEBI | Group ID | Metabolite | Is sensitive | Sensitivity conc. | Is resistant | Resistance conc. | |
|---|---|---|---|---|---|---|---|---|
| 27583 | 28971 | 27 | ampicillin | 10 µg | ||||
| 27583 | 3393 | 27 | carbenicillin | 10 µg | ||||
| 27583 | 17698 | chloramphenicol | 30 | |||||
| 27583 | 48923 | erythromycin | 10 | |||||
| 27583 | 6104 | kanamycin | 10 µg | |||||
| 27583 | 18208 | penicillin g | 2 Unit | |||||
| 27583 | 8309 | polymyxin b | 300 Unit | |||||
| 27583 | 28077 | rifampicin | 10 | |||||
| 27583 | 17076 | streptomycin | 10 | |||||
| 27583 | 27902 | tetracycline | 30 |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119963 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 31262 | alkaline phosphatase | + | 3.1.3.1 | |
| 27583 | alkaline phosphatase | + | 3.1.3.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 27583 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 31262 | catalase | + | 1.11.1.6 | |
| 27583 | catalase | + | 1.11.1.6 | |
| 119963 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 31262 | cytochrome oxidase | + | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 31262 | gelatinase | + | ||
| 27583 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 119963 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119963 | ornithine decarboxylase | - | 4.1.1.17 | |
| 27583 | oxidase | + | ||
| 119963 | oxidase | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 119963 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | gluconeogenesis | 100 | 8 of 8 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | phenylacetate degradation (aerobic) | 100 | 5 of 5 | ||
| 66794 | NAD metabolism | 88.89 | 16 of 18 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | tetrahydrofolate metabolism | 85.71 | 12 of 14 | ||
| 66794 | lipid metabolism | 80.65 | 25 of 31 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | glycine betaine biosynthesis | 80 | 4 of 5 | ||
| 66794 | lipoate biosynthesis | 80 | 4 of 5 | ||
| 66794 | cellulose degradation | 80 | 4 of 5 | ||
| 66794 | histidine metabolism | 79.31 | 23 of 29 | ||
| 66794 | tryptophan metabolism | 78.95 | 30 of 38 | ||
| 66794 | purine metabolism | 78.72 | 74 of 94 | ||
| 66794 | photosynthesis | 78.57 | 11 of 14 | ||
| 66794 | aspartate and asparagine metabolism | 77.78 | 7 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 77.78 | 7 of 9 | ||
| 66794 | leucine metabolism | 76.92 | 10 of 13 | ||
| 66794 | CMP-KDO biosynthesis | 75 | 3 of 4 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | lysine metabolism | 73.81 | 31 of 42 | ||
| 66794 | pyrimidine metabolism | 73.33 | 33 of 45 | ||
| 66794 | propanol degradation | 71.43 | 5 of 7 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | Entner Doudoroff pathway | 70 | 7 of 10 | ||
| 66794 | propionate fermentation | 70 | 7 of 10 | ||
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | formaldehyde oxidation | 66.67 | 2 of 3 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | flavin biosynthesis | 66.67 | 10 of 15 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | alanine metabolism | 65.52 | 19 of 29 | ||
| 66794 | glutamate and glutamine metabolism | 64.29 | 18 of 28 | ||
| 66794 | citric acid cycle | 64.29 | 9 of 14 | ||
| 66794 | proline metabolism | 63.64 | 7 of 11 | ||
| 66794 | ketogluconate metabolism | 62.5 | 5 of 8 | ||
| 66794 | isoleucine metabolism | 62.5 | 5 of 8 | ||
| 66794 | vitamin B1 metabolism | 61.54 | 8 of 13 | ||
| 66794 | non-pathway related | 60.53 | 23 of 38 | ||
| 66794 | 3-chlorocatechol degradation | 60 | 3 of 5 | ||
| 66794 | factor 420 biosynthesis | 60 | 3 of 5 | ||
| 66794 | arachidonate biosynthesis | 60 | 3 of 5 | ||
| 66794 | threonine metabolism | 60 | 6 of 10 | ||
| 66794 | glycolysis | 58.82 | 10 of 17 | ||
| 66794 | arginine metabolism | 58.33 | 14 of 24 | ||
| 66794 | methionine metabolism | 57.69 | 15 of 26 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | polyamine pathway | 56.52 | 13 of 23 | ||
| 66794 | pentose phosphate pathway | 54.55 | 6 of 11 | ||
| 66794 | isoprenoid biosynthesis | 53.85 | 14 of 26 | ||
| 66794 | sulfate reduction | 53.85 | 7 of 13 | ||
| 66794 | dolichol and dolichyl phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | dTDPLrhamnose biosynthesis | 50 | 4 of 8 | ||
| 66794 | heme metabolism | 50 | 7 of 14 | ||
| 66794 | glycogen biosynthesis | 50 | 2 of 4 | ||
| 66794 | cysteine metabolism | 50 | 9 of 18 | ||
| 66794 | tyrosine metabolism | 50 | 7 of 14 | ||
| 66794 | kanosamine biosynthesis II | 50 | 1 of 2 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 50 | 5 of 10 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | glycolate and glyoxylate degradation | 50 | 3 of 6 | ||
| 66794 | urea cycle | 46.15 | 6 of 13 | ||
| 66794 | phenylpropanoid biosynthesis | 46.15 | 6 of 13 | ||
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | ||
| 66794 | valine metabolism | 44.44 | 4 of 9 | ||
| 66794 | degradation of hexoses | 44.44 | 8 of 18 | ||
| 66794 | mevalonate metabolism | 42.86 | 3 of 7 | ||
| 66794 | reductive acetyl coenzyme A pathway | 42.86 | 3 of 7 | ||
| 66794 | oxidative phosphorylation | 41.76 | 38 of 91 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | gallate degradation | 40 | 2 of 5 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | degradation of sugar alcohols | 37.5 | 6 of 16 | ||
| 66794 | androgen and estrogen metabolism | 37.5 | 6 of 16 | ||
| 66794 | degradation of pentoses | 35.71 | 10 of 28 | ||
| 66794 | molybdenum cofactor biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | arachidonic acid metabolism | 33.33 | 6 of 18 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | degradation of sugar acids | 32 | 8 of 25 | ||
| 66794 | carotenoid biosynthesis | 31.82 | 7 of 22 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 30.77 | 4 of 13 | ||
| 66794 | phenol degradation | 30 | 6 of 20 | ||
| 66794 | myo-inositol biosynthesis | 30 | 3 of 10 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | glutathione metabolism | 28.57 | 4 of 14 | ||
| 66794 | aclacinomycin biosynthesis | 28.57 | 2 of 7 | ||
| 66794 | cholesterol biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | d-xylose degradation | 27.27 | 3 of 11 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | metabolism of disaccharids | 27.27 | 3 of 11 | ||
| 66794 | 3-phenylpropionate degradation | 26.67 | 4 of 15 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | catecholamine biosynthesis | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | ascorbate metabolism | 22.73 | 5 of 22 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 | ||
| 66794 | chlorophyll metabolism | 22.22 | 4 of 18 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 6838 | sea water (sand filtered) | Hong Kong, S. A. R., Port Shelter | China | CHN | Asia | |
| 27583 | sea water sample from Port Shelter | Hong Kong | China | CHN | Asia | |
| 67770 | Seawater collected in Port Shelter | Hong Kong SAR | China | CHN | Asia | |
| 119963 | Environment, Sea water | Hong Kong | China | CHN | Asia |
Global distribution of 16S sequence AB125062 (>99% sequence identity) for Owenweeksia hongkongensis subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM23670v1 assembly for Owenweeksia hongkongensis DSM 17368 | complete | 926562 | 99.18 | ||||
| 66792 | TrE-25oct19-222 assembly for Owenweeksia hongkongensis DSM 17368 | contig | 926562 | 44.8 | ||||
| 66792 | ZH-03apr19-245 assembly for Owenweeksia hongkongensis DSM 17368 | contig | 926562 | 30.2 | ||||
| 66792 | ME-21oct19-33 assembly for Owenweeksia hongkongensis DSM 17368 | contig | 926562 |
| @ref | Description | Accession | Database | |
|---|---|---|---|---|
| 27583 | Owenweeksia hongkongensis gene for 16S rRNA, partial sequence | AB125062 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 94.80 | no |
| 125439 | motility | BacteriaNetⓘ | no | 56.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.70 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 96.40 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 96.93 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 92.63 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 85.97 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 92.50 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.46 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 86.50 | yes |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Sensitivity of the mangrove-estuarine microbial community to aquaculture effluent. | Erazo NG, Bowman JS. | iScience | 10.1016/j.isci.2021.102204 | 2021 | ||
| Phylogenetic comparison between Type IX Secretion System (T9SS) protein components suggests evidence of horizontal gene transfer. | Emrizal R, Nor Muhammad NA. | PeerJ | 10.7717/peerj.9019 | 2020 | ||
| Phylogeny | Bacterial community segmentation facilitates the prediction of ecosystem function along the coast of the western Antarctic Peninsula. | Bowman JS, Amaral-Zettler LA, J Rich J, M Luria C, Ducklow HW. | ISME J | 10.1038/ismej.2016.204 | 2017 | |
| Genetics | Rapid quantification of sequence repeats to resolve the size, structure and contents of bacterial genomes. | Williams D, Trimble WL, Shilts M, Meyer F, Ochman H. | BMC Genomics | 10.1186/1471-2164-14-537 | 2013 | |
| Composition and Activity of Microbial Communities along the Redox Gradient of an Alkaline, Hypersaline, Lake. | Edwardson CF, Edwardson CF, Hollibaugh JT. | Front Microbiol | 10.3389/fmicb.2018.00014 | 2018 | ||
| Genetics | Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801(T)). | Riedel T, Held B, Nolan M, Lucas S, Lapidus A, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Palaniappan K, Rohde M, Tindall BJ, Detter JC, Goker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC | Stand Genomic Sci | 10.4056/sigs.3296896 | 2012 | |
| Phylogeny | Description of Lujinxingia vulgaris sp. nov., isolated from coastal sediment via prey-traps. | Wang S, Mu DS, Li GY, Du ZJ | Antonie Van Leeuwenhoek | 10.1007/s10482-021-01640-5 | 2021 | |
| Phylogeny | Croceimicrobium hydrocarbonivorans gen. nov., sp. nov., a novel marine bacterium isolated from a bacterial consortium that degrades polyethylene terephthalate. | Liu R, Lai Q, Gu L, Yan P, Shao Z | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004770 | 2021 | |
| Phylogeny | Vicingus serpentipes gen. nov., sp. nov., a new member of the Flavobacteriales from the North Sea. | Wiese J, Saha M, Wenzel-Storjohann A, Weinberger F, Schmaljohann R, Imhoff JF | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002509 | 2017 | |
| Phylogeny | Salibacter halophilus gen. nov., sp. nov., isolated from a saltern. | Lu DC, Xia J, Dunlap CA, Rooney AP, Du ZJ | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001807 | 2017 | |
| Phylogeny | Luteibaculum oceani gen. nov., sp. nov., a carotenoid-producing, lipolytic bacterium isolated from surface seawater, and emended description of the genus Owenweeksia Lau et al. 2005. | Shahina M, Hameed A, Lin SY, Lai WA, Liu YC, Hsu YH, Young CC | Int J Syst Evol Microbiol | 10.1099/ijs.0.054635-0 | 2013 | |
| Phylogeny | Phaeocystidibacter luteus gen. nov., sp. nov., a member of the family Cryomorphaceae isolated from the marine alga Phaeocystis globosa, and emended description of Owenweeksia hongkongensis. | Zhou Y, Su J, Lai Q, Li X, Yang X, Dong P, Zheng T | Int J Syst Evol Microbiol | 10.1099/ijs.0.030254-0 | 2012 | |
| Phylogeny | Owenweeksia hongkongensis gen. nov., sp. nov., a novel marine bacterium of the phylum 'Bacteroidetes'. | Lau KWK, Ng CYM, Ren J, Lau SCL, Qian PY, Wong PK, Lau TC, Wu M | Int J Syst Evol Microbiol | 10.1099/ijs.0.63155-0 | 2005 |
| #6838 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17368 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #27583 | IJSEM 1051 2005 ( DOI 10.1099/ijs.0.63155-0 , PubMed 15879232 ) |
| #31262 | Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27583 |
| #34970 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119963 | Collection of Institut Pasteur ; Curators of the CIP; CIP 108786 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive3250.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data