Lancefieldella parvula 1246 is an anaerobe, Gram-positive, oval-shaped bacterium that was isolated from Human gingival crevices.
Gram-positive oval-shaped anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Coriobacteriia |
| Order Coriobacteriales |
| Family Atopobiaceae |
| Genus Lancefieldella |
| Species Lancefieldella parvula |
| Full scientific name Lancefieldella parvula (Weinberg et al. 1937) Nouioui et al. 2018 |
| Synonyms (3) |
| BacDive ID | Other strains from Lancefieldella parvula (4) | Type strain |
|---|---|---|
| 156735 | L. parvula CCUG 64643 | |
| 161533 | L. parvula JCM 1472 | |
| 165412 | L. parvula JCM 6503, VPI 5229 | |
| 165413 | L. parvula JCM 6504 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_20469_1.jpg |
| multimedia.multimedia content: | EM_DSM_20469_1.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8840 | PYG MEDIUM (MODIFIED) (DSMZ Medium 104) | Medium recipe at MediaDive | Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water | ||
| 36589 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 121601 | CIP Medium 6 | Medium recipe at CIP | |||
| 121601 | CIP Medium 31 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 99.991 |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8840 | A11.31 | A4alpha L-Lys-D-Asp |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68380 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32A |
| 68380 | 29985 ChEBI | L-glutamate | - | degradation | from API rID32A |
| 68380 | 17632 ChEBI | nitrate | - | reduction | from API rID32A |
| 121601 | 17632 ChEBI | nitrate | - | reduction | |
| 121601 | 16301 ChEBI | nitrite | - | reduction | |
| 68380 | 16634 ChEBI | raffinose | - | fermentation | from API rID32A |
| 68380 | 27897 ChEBI | tryptophan | - | energy source | from API rID32A |
| 68380 | 16199 ChEBI | urea | - | hydrolysis | from API rID32A |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68380 | 35581 ChEBI | indole | from API rID32A |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 121601 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68380 | alkaline phosphatase | - | 3.1.3.1 | from API rID32A |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68380 | alpha-fucosidase | - | 3.2.1.51 | from API rID32A |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68380 | alpha-galactosidase | - | 3.2.1.22 | from API rID32A |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68380 | arginine dihydrolase | - | 3.5.3.6 | from API rID32A |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68380 | beta-galactosidase | + | 3.2.1.23 | from API rID32A |
| 68380 | beta-Galactosidase 6-phosphate | - | from API rID32A | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68380 | beta-glucuronidase | - | 3.2.1.31 | from API rID32A |
| 121601 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68380 | glutamate decarboxylase | - | 4.1.1.15 | from API rID32A |
| 68380 | glutamyl-glutamate arylamidase | - | from API rID32A | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68380 | leucyl glycin arylamidase | - | 3.4.11.1 | from API rID32A |
| 68382 | lipase (C 14) | - | from API zym | |
| 121601 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 121601 | ornithine decarboxylase | - | 4.1.1.17 | |
| 121601 | oxidase | - | ||
| 68380 | proline-arylamidase | - | 3.4.11.5 | from API rID32A |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68380 | tryptophan deaminase | - | 4.1.99.1 | from API rID32A |
| 68380 | urease | - | 3.5.1.5 | from API rID32A |
| 68382 | valine arylamidase | - | from API zym |
| @ref | URE | ADH (Arg) | alpha GAL | beta GAL | beta-Galactosidase 6-phosphatebeta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta-N-Acetyl-beta-glucosaminidasebeta NAG | MNE | RAF | GDC | alpha FUC | Reduction of nitrateNIT | IND | PAL | L-arginine arylamidaseArgA | ProA | LGA | Phenylalanine arylamidasePheA | Leucine arylamidaseLeuA | PyrA | Tyrosine arylamidaseTyrA | Alanine arylamidaseAlaA | Glycin arylamidaseGlyA | Histidine arylamidaseHisA | Glutamyl-glutamate arylamidaseGGA | Serine arylamidaseSerA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8840 | - | - | - | + | - | - | - | - | - | +/- | - | - | - | - | - | - | - | + | - | - | +/- | +/- | +/- | + | +/- | +/- | +/- | - | +/- | |
| 8840 | - | - | - | + | - | + | + | - | - | - | + | - | - | - | - | - | - | +/- | - | - | +/- | +/- | - | +/- | - | - | +/- | - | +/- |
Global distribution of 16S sequence X67150 (>99% sequence identity) for Lancefieldella parvula subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM2422v1 assembly for Lancefieldella parvula DSM 20469 | complete | 521095 | 99.66 | ||||
| 66792 | SRR9217392-mag-bin.20 assembly for Lancefieldella parvula DSM 20469 | contig | 521095 | 0 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 90.38 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.69 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 76.27 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.99 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 85.44 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 87.19 | yes |
| 125438 | aerobic | aerobicⓘ | no | 96.93 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 80.88 | no |
| 125438 | thermophilic | thermophileⓘ | no | 91.06 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 95.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| The human intestinal bacterium Eggerthella lenta influences gut metabolomes in gnotobiotic mice | Viehof A, Haange S, Streidl T, Schubert K, Engelmann B, Haller D, Rolle-Kampczyk U, von Bergen M, Clavel T. | Microbiome Res Rep | 2024 | |||
| Metabolism | Quantification of hydrogen production by intestinal bacteria that are specifically dysregulated in Parkinson's disease. | Suzuki A, Ito M, Hamaguchi T, Mori H, Takeda Y, Baba R, Watanabe T, Kurokawa K, Asakawa S, Hirayama M, Ohno K. | PLoS One | 10.1371/journal.pone.0208313 | 2018 | |
| Quantification of Slackia and Eggerthella spp. in Human Feces and Adhesion of Representatives Strains to Caco-2 Cells. | Cho GS, Ritzmann F, Eckstein M, Huch M, Briviba K, Behsnilian D, Neve H, Franz CM. | Front Microbiol | 10.3389/fmicb.2016.00658 | 2016 | ||
| Development of a species-specific TaqMan-MGB real-time PCR assay to quantify Olsenella scatoligenes in pigs offered a chicory root-based diet. | Li X, Jensen BB, Hojberg O, Noel SJ, Canibe N. | AMB Express | 10.1186/s13568-018-0627-y | 2018 | ||
| Dissemination of 6S RNA among bacteria. | Wehner S, Damm K, Hartmann RK, Marz M. | RNA Biol | 10.4161/rna.29894 | 2014 | ||
| Phylogeny | Genomic analysis of Melioribacter roseus, facultatively anaerobic organotrophic bacterium representing a novel deep lineage within Bacteriodetes/Chlorobi group. | Kadnikov VV, Mardanov AV, Podosokorskaya OA, Gavrilov SN, Kublanov IV, Beletsky AV, Bonch-Osmolovskaya EA, Ravin NV. | PLoS One | 10.1371/journal.pone.0053047 | 2013 | |
| Metabolism | Association of purine asymmetry, strand-biased gene distribution and PolC within Firmicutes and beyond: a new appraisal. | Saha SK, Goswami A, Dutta C. | BMC Genomics | 10.1186/1471-2164-15-430 | 2014 | |
| Genetics | Genome-Based Taxonomic Classification of the Phylum Actinobacteria. | Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M. | Front Microbiol | 10.3389/fmicb.2018.02007 | 2018 | |
| Clinical management of Lancefieldella parvula bacteremia: A case study and review of the literature. | Wenglinski C, Martiny D, Watchi M, Taccone FS, Vacheron CH. | Rev Argent Microbiol | 10.1016/j.ram.2025.06.004 | 2025 | ||
| Isolation of Lancefieldella parvula in Secondary Infection from Human Bite: A Rare Occurrence. | Jimenez Rayas S, Cervantes Hernandez MI, Vanegas Rodriguez ES, Colin Castro CA, Martinez Zavaleta MG, Franco Cendejas R, Lopez Jacome LE. | Diagn Microbiol Infect Dis | 10.1016/j.diagmicrobio.2025.116842 | 2025 | ||
| Microbiota Association and Profiling of Gingival Sulci and Root Canals of Teeth with Primary or Secondary/Persistent Endodontic Infections. | Park DH, Park OJ, Yoo YJ, Perinpanayagam H, Cho EB, Kim K, Park J, Noblett WC, Kum KY, Han SH. | J Endod | 10.1016/j.joen.2024.04.016 | 2024 | ||
| An uncommon case of bacteremia caused by Lancefieldella parvula in an oncological patient. | Cobo F, Perez-Carrasco V, Garcia-Salcedo JA, Navarro-Mari JM. | Anaerobe | 10.1016/j.anaerobe.2022.102661 | 2022 | ||
| Multi-year comparison of VITEK MS performance for identification of rarely encountered pathogenic gram-positive organisms (GPOs) in a large integrated Canadian healthcare region. | Church D, Griener T, Gregson D. | Microbiol Spectr | 10.1128/spectrum.02545-24 | 2025 | ||
| An association between poor oral health, oral microbiota, and pain identified in New Zealand women with central sensitisation disorders: a prospective clinical study. | Erdrich S, Gelissen IC, Vuyisich M, Toma R, Harnett JE. | Front Pain Res (Lausanne) | 10.3389/fpain.2025.1577193 | 2025 | ||
| A cross-cohort study identifies potential oral microbial markers for esophageal squamous cell carcinoma. | Yu Y, Xia L, Wang Z, Zhu T, Zhao L, Fan S. | iScience | 10.1016/j.isci.2024.111453 | 2024 | ||
| Exploring Relationships Within the Microbiome of Root Canal Infections and the Influence of Associated Clinical Parameters. | Mominkhan D, Brito LCN, Yakubu AR, Larson E, Martin L, Patel M, Tavares WLF, Ribeiro-Sobrinho A, Teles F. | Int Endod J | 10.1111/iej.70011 | 2025 | ||
| Genetics | Using Nanopore Sequencing to Obtain Complete Bacterial Genomes from Saliva Samples. | Baker JL. | mSystems | 10.1128/msystems.00491-22 | 2022 | |
| Pathogenicity | Green Tea Kombucha Impacts Inflammation and Salivary Microbiota in Individuals with Excess Body Weight: A Randomized Controlled Trial. | Fraiz GM, Bonifacio DB, Lacerda UV, Cardoso RR, Corich V, Giacomini A, Martino HSD, Echeverria SE, Barros FAR, Milagro FI, Bressan J. | Nutrients | 10.3390/nu16183186 | 2024 | |
| Transcriptome | Respiratory immune status and microbiome in recovered COVID-19 patients revealed by metatranscriptomic analyses. | Meng H, Wang S, Tang X, Guo J, Xu X, Wang D, Jin F, Zheng M, Yin S, He C, Han Y, Chen J, Han J, Ren C, Gao Y, Liu H, Wang Y, Jin R. | Front Cell Infect Microbiol | 10.3389/fcimb.2022.1011672 | 2022 | |
| The Effect of Probiotics on Health in Pregnancy and Infants: A Randomized, Double-Blind, Placebo-Controlled Trial. | Binda S, Chow-Shi-Yee M, El Salti S, Auclair-Ouellet N, Oula ML, Carton T, Leuillet S, Tomassi D, Hemmings R, Kadoch IJ. | Nutrients | 10.3390/nu17111825 | 2025 | ||
| Phylogeny | Cervicovaginal microbial features predict Chlamydia trachomatis spread to the upper genital tract of infected women. | Jeong S, Tollison T, Brochu H, Chou H, Huntress I, Yount KS, Zheng X, Darville T, O'Connell CM, Peng X. | Infect Immun | 10.1128/iai.00057-25 | 2025 | |
| Sepsityper® Kit versus In-House Method in Rapid Identification of Bacteria from Positive Blood Cultures by MALDI-TOF Mass Spectrometry. | Perse G, Samoscanec I, Bosnjak Z, Budimir A, Kulis T, Marekovic I. | Life (Basel) | 10.3390/life12111744 | 2022 | ||
| Fecal Microbiome and Metabolomic Profiles of Mixed-Fed Infants Are More Similar to Formula-Fed than Breastfed Infants. | Wang M, Valizadegan N, Fields CJ, Donovan SM. | Microorganisms | 10.3390/microorganisms13010166 | 2025 | ||
| Profiles of subgingival microbiomes and gingival crevicular metabolic signatures in patients with amnestic mild cognitive impairment and Alzheimer's disease. | Qiu C, Zhou W, Shen H, Wang J, Tang R, Wang T, Xie X, Hong B, Ren R, Wang G, Song Z. | Alzheimers Res Ther | 10.1186/s13195-024-01402-1 | 2024 | ||
| Maternal antibiotic prophylaxis during cesarean section has a limited impact on the infant gut microbiome. | Sinha T, Prins JR, Fernandez-Pato A, Kruk M, Dierikx T, de Meij T, de Boer M, de Boer JF, Scherjon S, Kurilshikov A, Zhernakova A. | Cell Host Microbe | 10.1016/j.chom.2024.07.010 | 2024 | ||
| Pathogenicity | The clinical impacts of lung microbiome in bronchiectasis with fixed airflow obstruction: a prospective cohort study. | Chen YF, Hou HH, Chien N, Lu KZ, Lin CH, Liao YC, Lor KL, Chien JY, Chen CM, Chen CY, Cheng SL, Wang HC, Hsueh PR, Yu CJ. | Respir Res | 10.1186/s12931-024-02931-x | 2024 | |
| Commensal Lactobacilli Metabolically Contribute to Cervical Epithelial Homeostasis in a Species-Specific Manner. | Jimenez NR, Maarsingh JD, Laniewski P, Herbst-Kralovetz MM. | mSphere | 10.1128/msphere.00452-22 | 2023 | ||
| Systematic Review of Actinomycetes in the Baijiu Fermentation Microbiome. | Chen C, Yang H, Liu J, Luo H, Zou W. | Foods | 10.3390/foods11223551 | 2022 | ||
| Phylogeny | Immunometabolic and potential tumor-promoting changes in 3D cervical cell models infected with bacterial vaginosis-associated bacteria. | Maarsingh JD, Laniewski P, Herbst-Kralovetz MM. | Commun Biol | 10.1038/s42003-022-03681-6 | 2022 | |
| Enzymology | Antimicrobial activity of Streptococcus salivarius K12 on bacteria involved in oral malodour. | Masdea L, Kulik EM, Hauser-Gerspach I, Ramseier AM, Filippi A, Waltimo T | Arch Oral Biol | 10.1016/j.archoralbio.2012.02.011 | 2012 |
| #8840 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20469 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #36589 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66793 | Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68380 | Automatically annotated from API rID32A . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121601 | Collection of Institut Pasteur ; Curators of the CIP; CIP 102970 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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